Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3LA5:A24:A20
Extra
PDB:
ATOM 1 O3' U A 23 -11.017 28.032 22.536 1.00 20.59 O
ATOM 2 P G A 24 -10.178 27.061 21.581 1.00 19.18 P
ATOM 3 OP1 G A 24 -9.777 25.883 22.388 1.00 17.70 O
ATOM 4 OP2 G A 24 -9.150 27.862 20.880 1.00 17.66 O
ATOM 5 O5' G A 24 -11.257 26.599 20.488 1.00 15.55 O
ATOM 6 C5' G A 24 -12.313 25.692 20.763 1.00 16.81 C
ATOM 7 C4' G A 24 -12.966 25.283 19.455 1.00 15.87 C
ATOM 8 O4' G A 24 -13.559 26.445 18.808 1.00 14.36 O
ATOM 9 C3' G A 24 -11.964 24.773 18.434 1.00 13.01 C
ATOM 10 O3' G A 24 -11.733 23.382 18.634 1.00 13.33 O
ATOM 11 C2' G A 24 -12.696 25.030 17.125 1.00 11.70 C
ATOM 12 O2' G A 24 -13.728 24.087 16.909 1.00 12.58 O
ATOM 13 C1' G A 24 -13.302 26.401 17.415 1.00 13.34 C
ATOM 14 N9 G A 24 -12.501 27.565 17.058 1.00 12.28 N
ATOM 15 C8 G A 24 -11.507 28.181 17.787 1.00 13.30 C
ATOM 16 N7 G A 24 -10.992 29.219 17.182 1.00 15.69 N
ATOM 17 C5 G A 24 -11.694 29.309 15.982 1.00 13.43 C
ATOM 18 C6 G A 24 -11.591 30.240 14.914 1.00 13.30 C
ATOM 19 O6 G A 24 -10.825 31.211 14.807 1.00 14.59 O
ATOM 20 N1 G A 24 -12.489 29.954 13.884 1.00 13.29 N
ATOM 21 C2 G A 24 -13.382 28.911 13.901 1.00 12.44 C
ATOM 22 N2 G A 24 -14.178 28.785 12.826 1.00 12.25 N
ATOM 23 N3 G A 24 -13.488 28.035 14.896 1.00 13.09 N
ATOM 24 C4 G A 24 -12.618 28.295 15.895 1.00 11.52 C
ATOM 25 P G A 25 -10.348 22.741 18.147 1.00 14.21 P
ATOM 26 OP1 G A 25 -10.401 21.307 18.507 1.00 16.93 O
ATOM 27 OP2 G A 25 -9.211 23.551 18.633 1.00 14.99 O
ATOM 28 O5' G A 25 -10.383 22.910 16.560 1.00 14.64 O
TER
ATOM 1 O3' G B 19 -18.082 16.227 18.198 1.00 19.51 O
ATOM 2 P A B 20 -19.169 17.363 18.480 1.00 19.96 P
ATOM 3 OP1 A B 20 -19.615 17.179 19.883 1.00 25.53 O
ATOM 4 OP2 A B 20 -20.157 17.422 17.385 1.00 19.19 O
ATOM 5 O5' A B 20 -18.246 18.656 18.376 1.00 18.44 O
ATOM 6 C5' A B 20 -18.768 19.922 18.056 1.00 15.97 C
ATOM 7 C4' A B 20 -17.606 20.890 18.077 1.00 16.22 C
ATOM 8 O4' A B 20 -16.646 20.521 17.050 1.00 15.71 O
ATOM 9 C3' A B 20 -17.960 22.332 17.767 1.00 15.65 C
ATOM 10 O3' A B 20 -18.436 22.945 18.956 1.00 18.76 O
ATOM 11 C2' A B 20 -16.590 22.863 17.358 1.00 14.69 C
ATOM 12 O2' A B 20 -15.697 23.070 18.442 1.00 12.69 O
ATOM 13 C1' A B 20 -16.052 21.700 16.534 1.00 14.42 C
ATOM 14 N9 A B 20 -16.313 21.779 15.096 1.00 14.00 N
ATOM 15 C8 A B 20 -17.141 20.977 14.358 1.00 16.28 C
ATOM 16 N7 A B 20 -17.155 21.285 13.080 1.00 16.81 N
ATOM 17 C5 A B 20 -16.271 22.347 12.972 1.00 13.68 C
ATOM 18 C6 A B 20 -15.840 23.125 11.878 1.00 14.57 C
ATOM 19 N6 A B 20 -16.275 22.932 10.622 1.00 14.79 N
ATOM 20 N1 A B 20 -14.960 24.119 12.126 1.00 15.33 N
ATOM 21 C2 A B 20 -14.528 24.313 13.380 1.00 14.56 C
ATOM 22 N3 A B 20 -14.863 23.645 14.484 1.00 13.18 N
ATOM 23 C4 A B 20 -15.738 22.662 14.210 1.00 15.16 C
ATOM 24 P U B 21 -19.545 24.099 18.904 1.00 18.71 P
ATOM 25 OP1 U B 21 -19.914 24.401 20.307 1.00 20.97 O
ATOM 26 OP2 U B 21 -20.597 23.707 17.949 1.00 17.46 O
ATOM 27 O5' U B 21 -18.741 25.335 18.272 1.00 15.34 O
TER
ATOM 2 P G A 24 -10.178 27.061 21.581 1.00 19.18 P
ATOM 3 OP1 G A 24 -9.777 25.883 22.388 1.00 17.70 O
ATOM 4 OP2 G A 24 -9.150 27.862 20.880 1.00 17.66 O
ATOM 5 O5' G A 24 -11.257 26.599 20.488 1.00 15.55 O
ATOM 6 C5' G A 24 -12.313 25.692 20.763 1.00 16.81 C
ATOM 7 C4' G A 24 -12.966 25.283 19.455 1.00 15.87 C
ATOM 8 O4' G A 24 -13.559 26.445 18.808 1.00 14.36 O
ATOM 9 C3' G A 24 -11.964 24.773 18.434 1.00 13.01 C
ATOM 10 O3' G A 24 -11.733 23.382 18.634 1.00 13.33 O
ATOM 11 C2' G A 24 -12.696 25.030 17.125 1.00 11.70 C
ATOM 12 O2' G A 24 -13.728 24.087 16.909 1.00 12.58 O
ATOM 13 C1' G A 24 -13.302 26.401 17.415 1.00 13.34 C
ATOM 14 N9 G A 24 -12.501 27.565 17.058 1.00 12.28 N
ATOM 15 C8 G A 24 -11.507 28.181 17.787 1.00 13.30 C
ATOM 16 N7 G A 24 -10.992 29.219 17.182 1.00 15.69 N
ATOM 17 C5 G A 24 -11.694 29.309 15.982 1.00 13.43 C
ATOM 18 C6 G A 24 -11.591 30.240 14.914 1.00 13.30 C
ATOM 19 O6 G A 24 -10.825 31.211 14.807 1.00 14.59 O
ATOM 20 N1 G A 24 -12.489 29.954 13.884 1.00 13.29 N
ATOM 21 C2 G A 24 -13.382 28.911 13.901 1.00 12.44 C
ATOM 22 N2 G A 24 -14.178 28.785 12.826 1.00 12.25 N
ATOM 23 N3 G A 24 -13.488 28.035 14.896 1.00 13.09 N
ATOM 24 C4 G A 24 -12.618 28.295 15.895 1.00 11.52 C
ATOM 25 P G A 25 -10.348 22.741 18.147 1.00 14.21 P
ATOM 26 OP1 G A 25 -10.401 21.307 18.507 1.00 16.93 O
ATOM 27 OP2 G A 25 -9.211 23.551 18.633 1.00 14.99 O
ATOM 28 O5' G A 25 -10.383 22.910 16.560 1.00 14.64 O
TER
ATOM 1 O3' G B 19 -18.082 16.227 18.198 1.00 19.51 O
ATOM 2 P A B 20 -19.169 17.363 18.480 1.00 19.96 P
ATOM 3 OP1 A B 20 -19.615 17.179 19.883 1.00 25.53 O
ATOM 4 OP2 A B 20 -20.157 17.422 17.385 1.00 19.19 O
ATOM 5 O5' A B 20 -18.246 18.656 18.376 1.00 18.44 O
ATOM 6 C5' A B 20 -18.768 19.922 18.056 1.00 15.97 C
ATOM 7 C4' A B 20 -17.606 20.890 18.077 1.00 16.22 C
ATOM 8 O4' A B 20 -16.646 20.521 17.050 1.00 15.71 O
ATOM 9 C3' A B 20 -17.960 22.332 17.767 1.00 15.65 C
ATOM 10 O3' A B 20 -18.436 22.945 18.956 1.00 18.76 O
ATOM 11 C2' A B 20 -16.590 22.863 17.358 1.00 14.69 C
ATOM 12 O2' A B 20 -15.697 23.070 18.442 1.00 12.69 O
ATOM 13 C1' A B 20 -16.052 21.700 16.534 1.00 14.42 C
ATOM 14 N9 A B 20 -16.313 21.779 15.096 1.00 14.00 N
ATOM 15 C8 A B 20 -17.141 20.977 14.358 1.00 16.28 C
ATOM 16 N7 A B 20 -17.155 21.285 13.080 1.00 16.81 N
ATOM 17 C5 A B 20 -16.271 22.347 12.972 1.00 13.68 C
ATOM 18 C6 A B 20 -15.840 23.125 11.878 1.00 14.57 C
ATOM 19 N6 A B 20 -16.275 22.932 10.622 1.00 14.79 N
ATOM 20 N1 A B 20 -14.960 24.119 12.126 1.00 15.33 N
ATOM 21 C2 A B 20 -14.528 24.313 13.380 1.00 14.56 C
ATOM 22 N3 A B 20 -14.863 23.645 14.484 1.00 13.18 N
ATOM 23 C4 A B 20 -15.738 22.662 14.210 1.00 15.16 C
ATOM 24 P U B 21 -19.545 24.099 18.904 1.00 18.71 P
ATOM 25 OP1 U B 21 -19.914 24.401 20.307 1.00 20.97 O
ATOM 26 OP2 U B 21 -20.597 23.707 17.949 1.00 17.46 O
ATOM 27 O5' U B 21 -18.741 25.335 18.272 1.00 15.34 O
TER
Atoms:
OP1: (-9.777,25.883,22.388)
OP2: (-9.150,27.862,20.880)
C3': (-11.964,24.773,18.434)
C1': (-13.302,26.401,17.415)
C5': (-12.313,25.692,20.763)
O6: (-10.825,31.211,14.807)
O4': (-13.559,26.445,18.808)
C8: (-11.507,28.181,17.787)
C2: (-13.382,28.911,13.901)
C6: (-11.591,30.240,14.914)
C5: (-11.694,29.309,15.982)
C4: (-12.618,28.295,15.895)
P: (-10.178,27.061,21.581)
C4': (-12.966,25.283,19.455)
C2': (-12.696,25.030,17.125)
O2': (-13.728,24.087,16.909)
N1: (-12.489,29.954,13.884)
N2: (-14.178,28.785,12.826)
N3: (-13.488,28.035,14.896)
N7: (-10.992,29.219,17.182)
N9: (-12.501,27.565,17.058)
O5': (-11.257,26.599,20.488)
O3': (-11.733,23.382,18.634)
OP2: (-9.150,27.862,20.880)
C3': (-11.964,24.773,18.434)
C1': (-13.302,26.401,17.415)
C5': (-12.313,25.692,20.763)
O6: (-10.825,31.211,14.807)
O4': (-13.559,26.445,18.808)
C8: (-11.507,28.181,17.787)
C2: (-13.382,28.911,13.901)
C6: (-11.591,30.240,14.914)
C5: (-11.694,29.309,15.982)
C4: (-12.618,28.295,15.895)
P: (-10.178,27.061,21.581)
C4': (-12.966,25.283,19.455)
C2': (-12.696,25.030,17.125)
O2': (-13.728,24.087,16.909)
N1: (-12.489,29.954,13.884)
N2: (-14.178,28.785,12.826)
N3: (-13.488,28.035,14.896)
N7: (-10.992,29.219,17.182)
N9: (-12.501,27.565,17.058)
O5': (-11.257,26.599,20.488)
O3': (-11.733,23.382,18.634)
OP1: (-19.615,17.179,19.883)
OP2: (-20.157,17.422,17.385)
C3': (-17.960,22.332,17.767)
C1': (-16.052,21.700,16.534)
C5': (-18.768,19.922,18.056)
O4': (-16.646,20.521,17.050)
C8: (-17.141,20.977,14.358)
O2': (-15.697,23.070,18.442)
C6: (-15.840,23.125,11.878)
C5: (-16.271,22.347,12.972)
C4: (-15.738,22.662,14.210)
P: (-19.169,17.363,18.480)
C4': (-17.606,20.890,18.077)
C2': (-16.590,22.863,17.358)
C2: (-14.528,24.313,13.380)
N1: (-14.960,24.119,12.126)
N3: (-14.863,23.645,14.484)
N6: (-16.275,22.932,10.622)
N7: (-17.155,21.285,13.080)
N9: (-16.313,21.779,15.096)
O5': (-18.246,18.656,18.376)
O3': (-18.436,22.945,18.956)
OP2: (-20.157,17.422,17.385)
C3': (-17.960,22.332,17.767)
C1': (-16.052,21.700,16.534)
C5': (-18.768,19.922,18.056)
O4': (-16.646,20.521,17.050)
C8: (-17.141,20.977,14.358)
O2': (-15.697,23.070,18.442)
C6: (-15.840,23.125,11.878)
C5: (-16.271,22.347,12.972)
C4: (-15.738,22.662,14.210)
P: (-19.169,17.363,18.480)
C4': (-17.606,20.890,18.077)
C2': (-16.590,22.863,17.358)
C2: (-14.528,24.313,13.380)
N1: (-14.960,24.119,12.126)
N3: (-14.863,23.645,14.484)
N6: (-16.275,22.932,10.622)
N7: (-17.155,21.285,13.080)
N9: (-16.313,21.779,15.096)
O5': (-18.246,18.656,18.376)
O3': (-18.436,22.945,18.956)
Image (generated by PyMOL):