ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:0197:0653

Extra

PDB:
ATOM 1 O3' C A 196 52.923 105.060 33.785 1.00 40.61 O
ATOM 2 P G A 197 53.242 103.973 34.920 1.00 42.16 P
ATOM 3 OP1 G A 197 52.583 104.444 36.164 1.00 40.79 O
ATOM 4 OP2 G A 197 54.701 103.701 34.918 1.00 41.06 O
ATOM 5 O5' G A 197 52.494 102.661 34.400 1.00 43.57 O
ATOM 6 C5' G A 197 51.053 102.607 34.349 1.00 42.61 C
ATOM 7 C4' G A 197 50.586 101.319 33.711 1.00 41.77 C
ATOM 8 O4' G A 197 51.034 101.271 32.331 1.00 41.25 O
ATOM 9 C3' G A 197 51.116 100.019 34.292 1.00 41.41 C
ATOM 10 O3' G A 197 50.449 99.587 35.461 1.00 41.25 O
ATOM 11 C2' G A 197 50.858 99.057 33.152 1.00 40.75 C
ATOM 12 O2' G A 197 49.493 98.712 33.068 1.00 42.33 O
ATOM 13 C1' G A 197 51.250 99.920 31.955 1.00 40.24 C
ATOM 14 N9 G A 197 52.661 99.731 31.627 1.00 39.50 N
ATOM 15 C8 G A 197 53.727 100.528 31.963 1.00 38.78 C
ATOM 16 N7 G A 197 54.866 100.066 31.527 1.00 37.96 N
ATOM 17 C5 G A 197 54.530 98.901 30.859 1.00 38.57 C
ATOM 18 C6 G A 197 55.340 97.969 30.174 1.00 39.65 C
ATOM 19 O6 G A 197 56.560 97.999 29.987 1.00 38.90 O
ATOM 20 N1 G A 197 54.588 96.917 29.667 1.00 40.52 N
ATOM 21 C2 G A 197 53.229 96.787 29.789 1.00 40.10 C
ATOM 22 N2 G A 197 52.677 95.698 29.248 1.00 40.58 N
ATOM 23 N3 G A 197 52.465 97.657 30.401 1.00 40.21 N
ATOM 24 C4 G A 197 53.175 98.680 30.915 1.00 39.29 C
ATOM 25 P U A 198 51.289 98.850 36.615 1.00 45.06 P
ATOM 26 OP1 U A 198 50.321 98.512 37.692 1.00 44.37 O
ATOM 27 OP2 U A 198 52.463 99.696 36.919 1.00 45.59 O
ATOM 28 O5' U A 198 51.857 97.509 35.954 1.00 43.42 O
TER

ATOM 1 O3' U B 652 40.393 97.694 34.304 1.00 45.64 O
ATOM 2 P A B 653 40.919 99.087 33.692 1.00 46.04 P
ATOM 3 OP1 A B 653 40.628 100.132 34.714 1.00 43.51 O
ATOM 4 OP2 A B 653 40.400 99.250 32.307 1.00 43.44 O
ATOM 5 O5' A B 653 42.497 98.879 33.610 1.00 42.99 O
ATOM 6 C5' A B 653 43.276 98.827 34.812 1.00 42.39 C
ATOM 7 C4' A B 653 44.743 98.975 34.507 1.00 41.98 C
ATOM 8 O4' A B 653 45.276 97.753 33.953 1.00 42.33 O
ATOM 9 C3' A B 653 45.124 100.039 33.501 1.00 42.02 C
ATOM 10 O3' A B 653 45.137 101.320 34.110 1.00 41.29 O
ATOM 11 C2' A B 653 46.516 99.588 33.084 1.00 42.94 C
ATOM 12 O2' A B 653 47.500 99.965 34.023 1.00 42.23 O
ATOM 13 C1' A B 653 46.360 98.062 33.098 1.00 43.30 C
ATOM 14 N9 A B 653 46.087 97.470 31.790 1.00 45.04 N
ATOM 15 C8 A B 653 44.875 97.069 31.283 1.00 45.96 C
ATOM 16 N7 A B 653 44.950 96.551 30.081 1.00 46.64 N
ATOM 17 C5 A B 653 46.300 96.617 29.776 1.00 46.07 C
ATOM 18 C6 A B 653 47.028 96.221 28.651 1.00 46.56 C
ATOM 19 N6 A B 653 46.480 95.645 27.584 1.00 47.43 N
ATOM 20 N1 A B 653 48.359 96.436 28.657 1.00 47.70 N
ATOM 21 C2 A B 653 48.908 97.008 29.734 1.00 47.39 C
ATOM 22 N3 A B 653 48.330 97.417 30.856 1.00 44.77 N
ATOM 23 C4 A B 653 47.010 97.191 30.814 1.00 45.07 C
ATOM 24 P A B 654 44.624 102.596 33.288 1.00 43.25 P
ATOM 25 OP1 A B 654 44.569 103.716 34.252 1.00 43.14 O
ATOM 26 OP2 A B 654 43.408 102.240 32.528 1.00 41.82 O
ATOM 27 O5' A B 654 45.809 102.875 32.258 1.00 42.69 O
TER

Atoms:
OP1: (52.583,104.444,36.164)
OP2: (54.701,103.701,34.918)
C3': (51.116,100.019,34.292)
C1': (51.250,99.920,31.955)
C5': (51.053,102.607,34.349)
O6: (56.560,97.999,29.987)
O4': (51.034,101.271,32.331)
C8: (53.727,100.528,31.963)
C2: (53.229,96.787,29.789)
C6: (55.340,97.969,30.174)
C5: (54.530,98.901,30.859)
C4: (53.175,98.680,30.915)
P: (53.242,103.973,34.920)
C4': (50.586,101.319,33.711)
C2': (50.858,99.057,33.152)
O2': (49.493,98.712,33.068)
N1: (54.588,96.917,29.667)
N2: (52.677,95.698,29.248)
N3: (52.465,97.657,30.401)
N7: (54.866,100.066,31.527)
N9: (52.661,99.731,31.627)
O5': (52.494,102.661,34.400)
O3': (50.449,99.587,35.461)
OP1: (40.628,100.132,34.714)
OP2: (40.400,99.250,32.307)
C3': (45.124,100.039,33.501)
C1': (46.360,98.062,33.098)
C5': (43.276,98.827,34.812)
O4': (45.276,97.753,33.953)
C8: (44.875,97.069,31.283)
O2': (47.500,99.965,34.023)
C6: (47.028,96.221,28.651)
C5: (46.300,96.617,29.776)
C4: (47.010,97.191,30.814)
P: (40.919,99.087,33.692)
C4': (44.743,98.975,34.507)
C2': (46.516,99.588,33.084)
C2: (48.908,97.008,29.734)
N1: (48.359,96.436,28.657)
N3: (48.330,97.417,30.856)
N6: (46.480,95.645,27.584)
N7: (44.950,96.551,30.081)
N9: (46.087,97.470,31.790)
O5': (42.497,98.879,33.610)
O3': (45.137,101.320,34.110)
Image (generated by PyMOL):
PyMOL image
show in jmol