Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0178:0192
Extra
PDB:
ATOM 1 O3' A A 177 72.005 108.190 24.885 1.00 49.78 O
ATOM 2 P G A 178 73.013 107.809 23.702 1.00 51.12 P
ATOM 3 OP1 G A 178 73.744 106.575 24.123 1.00 49.05 O
ATOM 4 OP2 G A 178 73.788 109.028 23.337 1.00 51.89 O
ATOM 5 O5' G A 178 72.029 107.458 22.499 1.00 50.43 O
ATOM 6 C5' G A 178 71.257 106.244 22.501 1.00 50.59 C
ATOM 7 C4' G A 178 70.414 106.163 21.256 1.00 51.11 C
ATOM 8 O4' G A 178 69.385 107.179 21.299 1.00 52.61 O
ATOM 9 C3' G A 178 71.157 106.419 19.959 1.00 52.22 C
ATOM 10 O3' G A 178 71.780 105.216 19.520 1.00 55.83 O
ATOM 11 C2' G A 178 70.042 106.893 19.039 1.00 51.54 C
ATOM 12 O2' G A 178 69.259 105.816 18.573 1.00 51.44 O
ATOM 13 C1' G A 178 69.182 107.714 20.004 1.00 51.14 C
ATOM 14 N9 G A 178 69.482 109.144 20.067 1.00 51.31 N
ATOM 15 C8 G A 178 70.567 109.734 20.678 1.00 50.35 C
ATOM 16 N7 G A 178 70.551 111.035 20.605 1.00 49.28 N
ATOM 17 C5 G A 178 69.392 111.324 19.899 1.00 50.18 C
ATOM 18 C6 G A 178 68.847 112.568 19.508 1.00 51.77 C
ATOM 19 O6 G A 178 69.293 113.705 19.713 1.00 53.89 O
ATOM 20 N1 G A 178 67.660 112.407 18.802 1.00 51.41 N
ATOM 21 C2 G A 178 67.077 111.207 18.502 1.00 49.00 C
ATOM 22 N2 G A 178 65.935 111.272 17.797 1.00 47.42 N
ATOM 23 N3 G A 178 67.576 110.036 18.860 1.00 48.46 N
ATOM 24 C4 G A 178 68.725 110.168 19.552 1.00 49.70 C
ATOM 25 P A A 179 73.145 105.280 18.676 1.00 58.61 P
ATOM 26 OP1 A A 179 73.654 103.883 18.591 1.00 56.98 O
ATOM 27 OP2 A A 179 74.025 106.345 19.229 1.00 58.31 O
ATOM 28 O5' A A 179 72.641 105.757 17.239 1.00 59.96 O
TER
ATOM 1 O3' G B 191 64.714 97.978 16.605 1.00 62.15 O
ATOM 2 P A B 192 64.272 99.528 16.598 1.00 61.81 P
ATOM 3 OP1 A B 192 62.998 99.640 17.360 1.00 62.59 O
ATOM 4 OP2 A B 192 64.349 100.082 15.221 1.00 62.66 O
ATOM 5 O5' A B 192 65.406 100.233 17.460 1.00 61.07 O
ATOM 6 C5' A B 192 66.789 99.830 17.368 1.00 55.55 C
ATOM 7 C4' A B 192 67.680 101.000 17.713 1.00 53.63 C
ATOM 8 O4' A B 192 67.498 102.030 16.704 1.00 52.32 O
ATOM 9 C3' A B 192 67.325 101.711 19.009 1.00 52.92 C
ATOM 10 O3' A B 192 67.847 101.068 20.166 1.00 55.06 O
ATOM 11 C2' A B 192 67.896 103.097 18.775 1.00 50.96 C
ATOM 12 O2' A B 192 69.305 103.130 18.895 1.00 51.25 O
ATOM 13 C1' A B 192 67.518 103.311 17.311 1.00 50.76 C
ATOM 14 N9 A B 192 66.192 103.907 17.153 1.00 48.07 N
ATOM 15 C8 A B 192 65.076 103.333 16.596 1.00 48.03 C
ATOM 16 N7 A B 192 64.020 104.112 16.603 1.00 48.66 N
ATOM 17 C5 A B 192 64.470 105.279 17.203 1.00 46.25 C
ATOM 18 C6 A B 192 63.830 106.493 17.507 1.00 46.16 C
ATOM 19 N6 A B 192 62.542 106.745 17.246 1.00 44.47 N
ATOM 20 N1 A B 192 64.567 107.453 18.100 1.00 45.06 N
ATOM 21 C2 A B 192 65.856 107.198 18.368 1.00 44.94 C
ATOM 22 N3 A B 192 66.566 106.102 18.135 1.00 42.71 N
ATOM 23 C4 A B 192 65.807 105.169 17.543 1.00 46.02 C
ATOM 24 P U B 193 66.972 101.042 21.518 1.00 55.15 P
ATOM 25 OP1 U B 193 67.827 100.388 22.544 1.00 52.87 O
ATOM 26 OP2 U B 193 65.615 100.500 21.233 1.00 53.63 O
ATOM 27 O5' U B 193 66.772 102.583 21.874 1.00 54.96 O
TER
ATOM 2 P G A 178 73.013 107.809 23.702 1.00 51.12 P
ATOM 3 OP1 G A 178 73.744 106.575 24.123 1.00 49.05 O
ATOM 4 OP2 G A 178 73.788 109.028 23.337 1.00 51.89 O
ATOM 5 O5' G A 178 72.029 107.458 22.499 1.00 50.43 O
ATOM 6 C5' G A 178 71.257 106.244 22.501 1.00 50.59 C
ATOM 7 C4' G A 178 70.414 106.163 21.256 1.00 51.11 C
ATOM 8 O4' G A 178 69.385 107.179 21.299 1.00 52.61 O
ATOM 9 C3' G A 178 71.157 106.419 19.959 1.00 52.22 C
ATOM 10 O3' G A 178 71.780 105.216 19.520 1.00 55.83 O
ATOM 11 C2' G A 178 70.042 106.893 19.039 1.00 51.54 C
ATOM 12 O2' G A 178 69.259 105.816 18.573 1.00 51.44 O
ATOM 13 C1' G A 178 69.182 107.714 20.004 1.00 51.14 C
ATOM 14 N9 G A 178 69.482 109.144 20.067 1.00 51.31 N
ATOM 15 C8 G A 178 70.567 109.734 20.678 1.00 50.35 C
ATOM 16 N7 G A 178 70.551 111.035 20.605 1.00 49.28 N
ATOM 17 C5 G A 178 69.392 111.324 19.899 1.00 50.18 C
ATOM 18 C6 G A 178 68.847 112.568 19.508 1.00 51.77 C
ATOM 19 O6 G A 178 69.293 113.705 19.713 1.00 53.89 O
ATOM 20 N1 G A 178 67.660 112.407 18.802 1.00 51.41 N
ATOM 21 C2 G A 178 67.077 111.207 18.502 1.00 49.00 C
ATOM 22 N2 G A 178 65.935 111.272 17.797 1.00 47.42 N
ATOM 23 N3 G A 178 67.576 110.036 18.860 1.00 48.46 N
ATOM 24 C4 G A 178 68.725 110.168 19.552 1.00 49.70 C
ATOM 25 P A A 179 73.145 105.280 18.676 1.00 58.61 P
ATOM 26 OP1 A A 179 73.654 103.883 18.591 1.00 56.98 O
ATOM 27 OP2 A A 179 74.025 106.345 19.229 1.00 58.31 O
ATOM 28 O5' A A 179 72.641 105.757 17.239 1.00 59.96 O
TER
ATOM 1 O3' G B 191 64.714 97.978 16.605 1.00 62.15 O
ATOM 2 P A B 192 64.272 99.528 16.598 1.00 61.81 P
ATOM 3 OP1 A B 192 62.998 99.640 17.360 1.00 62.59 O
ATOM 4 OP2 A B 192 64.349 100.082 15.221 1.00 62.66 O
ATOM 5 O5' A B 192 65.406 100.233 17.460 1.00 61.07 O
ATOM 6 C5' A B 192 66.789 99.830 17.368 1.00 55.55 C
ATOM 7 C4' A B 192 67.680 101.000 17.713 1.00 53.63 C
ATOM 8 O4' A B 192 67.498 102.030 16.704 1.00 52.32 O
ATOM 9 C3' A B 192 67.325 101.711 19.009 1.00 52.92 C
ATOM 10 O3' A B 192 67.847 101.068 20.166 1.00 55.06 O
ATOM 11 C2' A B 192 67.896 103.097 18.775 1.00 50.96 C
ATOM 12 O2' A B 192 69.305 103.130 18.895 1.00 51.25 O
ATOM 13 C1' A B 192 67.518 103.311 17.311 1.00 50.76 C
ATOM 14 N9 A B 192 66.192 103.907 17.153 1.00 48.07 N
ATOM 15 C8 A B 192 65.076 103.333 16.596 1.00 48.03 C
ATOM 16 N7 A B 192 64.020 104.112 16.603 1.00 48.66 N
ATOM 17 C5 A B 192 64.470 105.279 17.203 1.00 46.25 C
ATOM 18 C6 A B 192 63.830 106.493 17.507 1.00 46.16 C
ATOM 19 N6 A B 192 62.542 106.745 17.246 1.00 44.47 N
ATOM 20 N1 A B 192 64.567 107.453 18.100 1.00 45.06 N
ATOM 21 C2 A B 192 65.856 107.198 18.368 1.00 44.94 C
ATOM 22 N3 A B 192 66.566 106.102 18.135 1.00 42.71 N
ATOM 23 C4 A B 192 65.807 105.169 17.543 1.00 46.02 C
ATOM 24 P U B 193 66.972 101.042 21.518 1.00 55.15 P
ATOM 25 OP1 U B 193 67.827 100.388 22.544 1.00 52.87 O
ATOM 26 OP2 U B 193 65.615 100.500 21.233 1.00 53.63 O
ATOM 27 O5' U B 193 66.772 102.583 21.874 1.00 54.96 O
TER
Atoms:
OP1: (73.744,106.575,24.123)
OP2: (73.788,109.028,23.337)
C3': (71.157,106.419,19.959)
C1': (69.182,107.714,20.004)
C5': (71.257,106.244,22.501)
O6: (69.293,113.705,19.713)
O4': (69.385,107.179,21.299)
C8: (70.567,109.734,20.678)
C2: (67.077,111.207,18.502)
C6: (68.847,112.568,19.508)
C5: (69.392,111.324,19.899)
C4: (68.725,110.168,19.552)
P: (73.013,107.809,23.702)
C4': (70.414,106.163,21.256)
C2': (70.042,106.893,19.039)
O2': (69.259,105.816,18.573)
N1: (67.660,112.407,18.802)
N2: (65.935,111.272,17.797)
N3: (67.576,110.036,18.860)
N7: (70.551,111.035,20.605)
N9: (69.482,109.144,20.067)
O5': (72.029,107.458,22.499)
O3': (71.780,105.216,19.520)
OP2: (73.788,109.028,23.337)
C3': (71.157,106.419,19.959)
C1': (69.182,107.714,20.004)
C5': (71.257,106.244,22.501)
O6: (69.293,113.705,19.713)
O4': (69.385,107.179,21.299)
C8: (70.567,109.734,20.678)
C2: (67.077,111.207,18.502)
C6: (68.847,112.568,19.508)
C5: (69.392,111.324,19.899)
C4: (68.725,110.168,19.552)
P: (73.013,107.809,23.702)
C4': (70.414,106.163,21.256)
C2': (70.042,106.893,19.039)
O2': (69.259,105.816,18.573)
N1: (67.660,112.407,18.802)
N2: (65.935,111.272,17.797)
N3: (67.576,110.036,18.860)
N7: (70.551,111.035,20.605)
N9: (69.482,109.144,20.067)
O5': (72.029,107.458,22.499)
O3': (71.780,105.216,19.520)
OP1: (62.998,99.640,17.360)
OP2: (64.349,100.082,15.221)
C3': (67.325,101.711,19.009)
C1': (67.518,103.311,17.311)
C5': (66.789,99.830,17.368)
O4': (67.498,102.030,16.704)
C8: (65.076,103.333,16.596)
O2': (69.305,103.130,18.895)
C6: (63.830,106.493,17.507)
C5: (64.470,105.279,17.203)
C4: (65.807,105.169,17.543)
P: (64.272,99.528,16.598)
C4': (67.680,101.000,17.713)
C2': (67.896,103.097,18.775)
C2: (65.856,107.198,18.368)
N1: (64.567,107.453,18.100)
N3: (66.566,106.102,18.135)
N6: (62.542,106.745,17.246)
N7: (64.020,104.112,16.603)
N9: (66.192,103.907,17.153)
O5': (65.406,100.233,17.460)
O3': (67.847,101.068,20.166)
OP2: (64.349,100.082,15.221)
C3': (67.325,101.711,19.009)
C1': (67.518,103.311,17.311)
C5': (66.789,99.830,17.368)
O4': (67.498,102.030,16.704)
C8: (65.076,103.333,16.596)
O2': (69.305,103.130,18.895)
C6: (63.830,106.493,17.507)
C5: (64.470,105.279,17.203)
C4: (65.807,105.169,17.543)
P: (64.272,99.528,16.598)
C4': (67.680,101.000,17.713)
C2': (67.896,103.097,18.775)
C2: (65.856,107.198,18.368)
N1: (64.567,107.453,18.100)
N3: (66.566,106.102,18.135)
N6: (62.542,106.745,17.246)
N7: (64.020,104.112,16.603)
N9: (66.192,103.907,17.153)
O5': (65.406,100.233,17.460)
O3': (67.847,101.068,20.166)
Image (generated by PyMOL):