Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1K9M:A2332:A1017
Extra
PDB:
ATOM 1 O3' A A2331 54.143 109.429 112.080 1.00 31.04 O
ATOM 2 P G A2332 54.509 108.654 113.425 1.00 33.48 P
ATOM 3 OP1 G A2332 53.282 108.542 114.263 1.00 32.72 O
ATOM 4 OP2 G A2332 55.684 109.372 113.941 1.00 32.38 O
ATOM 5 O5' G A2332 54.900 107.190 112.923 1.00 30.76 O
ATOM 6 C5' G A2332 53.899 106.283 112.451 1.00 27.65 C
ATOM 7 C4' G A2332 54.515 104.996 111.963 1.00 30.69 C
ATOM 8 O4' G A2332 55.370 105.248 110.816 1.00 30.77 O
ATOM 9 C3' G A2332 55.423 104.268 112.937 1.00 32.06 C
ATOM 10 O3' G A2332 54.720 103.486 113.890 1.00 34.55 O
ATOM 11 C2' G A2332 56.224 103.381 112.006 1.00 31.64 C
ATOM 12 O2' G A2332 55.466 102.256 111.615 1.00 32.12 O
ATOM 13 C1' G A2332 56.462 104.333 110.830 1.00 31.37 C
ATOM 14 N9 G A2332 57.690 105.107 110.998 1.00 31.45 N
ATOM 15 C8 G A2332 57.778 106.407 111.437 1.00 32.23 C
ATOM 16 N7 G A2332 58.999 106.852 111.483 1.00 32.89 N
ATOM 17 C5 G A2332 59.771 105.782 111.056 1.00 32.44 C
ATOM 18 C6 G A2332 61.176 105.674 110.907 1.00 33.17 C
ATOM 19 O6 G A2332 62.047 106.529 111.127 1.00 34.23 O
ATOM 20 N1 G A2332 61.540 104.416 110.453 1.00 31.67 N
ATOM 21 C2 G A2332 60.673 103.395 110.177 1.00 29.62 C
ATOM 22 N2 G A2332 61.243 102.253 109.752 1.00 29.37 N
ATOM 23 N3 G A2332 59.360 103.480 110.308 1.00 29.36 N
ATOM 24 C4 G A2332 58.980 104.695 110.751 1.00 30.93 C
ATOM 25 P U A2333 55.236 103.428 115.408 1.00 36.58 P
ATOM 26 OP1 U A2333 54.168 102.701 116.118 1.00 35.01 O
ATOM 27 OP2 U A2333 55.584 104.814 115.818 1.00 34.66 O
ATOM 28 O5' U A2333 56.573 102.552 115.352 1.00 35.14 O
TER
ATOM 1 O3' A B1016 57.578 95.038 114.635 1.00 36.11 O
ATOM 2 P A B1017 56.533 94.875 113.424 1.00 38.11 P
ATOM 3 OP1 A B1017 55.216 94.678 114.068 1.00 36.84 O
ATOM 4 OP2 A B1017 57.053 93.851 112.488 1.00 37.61 O
ATOM 5 O5' A B1017 56.591 96.265 112.650 1.00 37.47 O
ATOM 6 C5' A B1017 55.960 97.467 113.134 1.00 35.27 C
ATOM 7 C4' A B1017 56.283 98.594 112.181 1.00 36.29 C
ATOM 8 O4' A B1017 57.730 98.699 112.104 1.00 35.79 O
ATOM 9 C3' A B1017 55.858 98.333 110.743 1.00 36.18 C
ATOM 10 O3' A B1017 54.518 98.757 110.480 1.00 37.95 O
ATOM 11 C2' A B1017 56.856 99.169 109.948 1.00 36.12 C
ATOM 12 O2' A B1017 56.534 100.546 109.944 1.00 36.01 O
ATOM 13 C1' A B1017 58.130 99.002 110.778 1.00 35.81 C
ATOM 14 N9 A B1017 59.109 97.997 110.340 1.00 35.88 N
ATOM 15 C8 A B1017 59.044 96.633 110.535 1.00 36.71 C
ATOM 16 N7 A B1017 60.094 95.986 110.092 1.00 37.63 N
ATOM 17 C5 A B1017 60.898 96.981 109.552 1.00 35.78 C
ATOM 18 C6 A B1017 62.150 96.932 108.924 1.00 35.95 C
ATOM 19 N6 A B1017 62.842 95.805 108.759 1.00 35.31 N
ATOM 20 N1 A B1017 62.680 98.092 108.478 1.00 37.30 N
ATOM 21 C2 A B1017 61.989 99.223 108.680 1.00 37.72 C
ATOM 22 N3 A B1017 60.803 99.397 109.271 1.00 36.32 N
ATOM 23 C4 A B1017 60.302 98.222 109.685 1.00 35.84 C
ATOM 24 P G B1018 53.271 97.884 111.004 1.00 38.25 P
ATOM 25 OP1 G B1018 52.903 98.436 112.338 1.00 35.98 O
ATOM 26 OP2 G B1018 53.588 96.446 110.866 1.00 39.45 O
ATOM 27 O5' G B1018 52.115 98.200 109.957 1.00 38.07 O
TER
ATOM 2 P G A2332 54.509 108.654 113.425 1.00 33.48 P
ATOM 3 OP1 G A2332 53.282 108.542 114.263 1.00 32.72 O
ATOM 4 OP2 G A2332 55.684 109.372 113.941 1.00 32.38 O
ATOM 5 O5' G A2332 54.900 107.190 112.923 1.00 30.76 O
ATOM 6 C5' G A2332 53.899 106.283 112.451 1.00 27.65 C
ATOM 7 C4' G A2332 54.515 104.996 111.963 1.00 30.69 C
ATOM 8 O4' G A2332 55.370 105.248 110.816 1.00 30.77 O
ATOM 9 C3' G A2332 55.423 104.268 112.937 1.00 32.06 C
ATOM 10 O3' G A2332 54.720 103.486 113.890 1.00 34.55 O
ATOM 11 C2' G A2332 56.224 103.381 112.006 1.00 31.64 C
ATOM 12 O2' G A2332 55.466 102.256 111.615 1.00 32.12 O
ATOM 13 C1' G A2332 56.462 104.333 110.830 1.00 31.37 C
ATOM 14 N9 G A2332 57.690 105.107 110.998 1.00 31.45 N
ATOM 15 C8 G A2332 57.778 106.407 111.437 1.00 32.23 C
ATOM 16 N7 G A2332 58.999 106.852 111.483 1.00 32.89 N
ATOM 17 C5 G A2332 59.771 105.782 111.056 1.00 32.44 C
ATOM 18 C6 G A2332 61.176 105.674 110.907 1.00 33.17 C
ATOM 19 O6 G A2332 62.047 106.529 111.127 1.00 34.23 O
ATOM 20 N1 G A2332 61.540 104.416 110.453 1.00 31.67 N
ATOM 21 C2 G A2332 60.673 103.395 110.177 1.00 29.62 C
ATOM 22 N2 G A2332 61.243 102.253 109.752 1.00 29.37 N
ATOM 23 N3 G A2332 59.360 103.480 110.308 1.00 29.36 N
ATOM 24 C4 G A2332 58.980 104.695 110.751 1.00 30.93 C
ATOM 25 P U A2333 55.236 103.428 115.408 1.00 36.58 P
ATOM 26 OP1 U A2333 54.168 102.701 116.118 1.00 35.01 O
ATOM 27 OP2 U A2333 55.584 104.814 115.818 1.00 34.66 O
ATOM 28 O5' U A2333 56.573 102.552 115.352 1.00 35.14 O
TER
ATOM 1 O3' A B1016 57.578 95.038 114.635 1.00 36.11 O
ATOM 2 P A B1017 56.533 94.875 113.424 1.00 38.11 P
ATOM 3 OP1 A B1017 55.216 94.678 114.068 1.00 36.84 O
ATOM 4 OP2 A B1017 57.053 93.851 112.488 1.00 37.61 O
ATOM 5 O5' A B1017 56.591 96.265 112.650 1.00 37.47 O
ATOM 6 C5' A B1017 55.960 97.467 113.134 1.00 35.27 C
ATOM 7 C4' A B1017 56.283 98.594 112.181 1.00 36.29 C
ATOM 8 O4' A B1017 57.730 98.699 112.104 1.00 35.79 O
ATOM 9 C3' A B1017 55.858 98.333 110.743 1.00 36.18 C
ATOM 10 O3' A B1017 54.518 98.757 110.480 1.00 37.95 O
ATOM 11 C2' A B1017 56.856 99.169 109.948 1.00 36.12 C
ATOM 12 O2' A B1017 56.534 100.546 109.944 1.00 36.01 O
ATOM 13 C1' A B1017 58.130 99.002 110.778 1.00 35.81 C
ATOM 14 N9 A B1017 59.109 97.997 110.340 1.00 35.88 N
ATOM 15 C8 A B1017 59.044 96.633 110.535 1.00 36.71 C
ATOM 16 N7 A B1017 60.094 95.986 110.092 1.00 37.63 N
ATOM 17 C5 A B1017 60.898 96.981 109.552 1.00 35.78 C
ATOM 18 C6 A B1017 62.150 96.932 108.924 1.00 35.95 C
ATOM 19 N6 A B1017 62.842 95.805 108.759 1.00 35.31 N
ATOM 20 N1 A B1017 62.680 98.092 108.478 1.00 37.30 N
ATOM 21 C2 A B1017 61.989 99.223 108.680 1.00 37.72 C
ATOM 22 N3 A B1017 60.803 99.397 109.271 1.00 36.32 N
ATOM 23 C4 A B1017 60.302 98.222 109.685 1.00 35.84 C
ATOM 24 P G B1018 53.271 97.884 111.004 1.00 38.25 P
ATOM 25 OP1 G B1018 52.903 98.436 112.338 1.00 35.98 O
ATOM 26 OP2 G B1018 53.588 96.446 110.866 1.00 39.45 O
ATOM 27 O5' G B1018 52.115 98.200 109.957 1.00 38.07 O
TER
Atoms:
OP1: (53.282,108.542,114.263)
OP2: (55.684,109.372,113.941)
C3': (55.423,104.268,112.937)
C1': (56.462,104.333,110.830)
C5': (53.899,106.283,112.451)
O6: (62.047,106.529,111.127)
O4': (55.370,105.248,110.816)
C8: (57.778,106.407,111.437)
C2: (60.673,103.395,110.177)
C6: (61.176,105.674,110.907)
C5: (59.771,105.782,111.056)
C4: (58.980,104.695,110.751)
P: (54.509,108.654,113.425)
C4': (54.515,104.996,111.963)
C2': (56.224,103.381,112.006)
O2': (55.466,102.256,111.615)
N1: (61.540,104.416,110.453)
N2: (61.243,102.253,109.752)
N3: (59.360,103.480,110.308)
N7: (58.999,106.852,111.483)
N9: (57.690,105.107,110.998)
O5': (54.900,107.190,112.923)
O3': (54.720,103.486,113.890)
OP2: (55.684,109.372,113.941)
C3': (55.423,104.268,112.937)
C1': (56.462,104.333,110.830)
C5': (53.899,106.283,112.451)
O6: (62.047,106.529,111.127)
O4': (55.370,105.248,110.816)
C8: (57.778,106.407,111.437)
C2: (60.673,103.395,110.177)
C6: (61.176,105.674,110.907)
C5: (59.771,105.782,111.056)
C4: (58.980,104.695,110.751)
P: (54.509,108.654,113.425)
C4': (54.515,104.996,111.963)
C2': (56.224,103.381,112.006)
O2': (55.466,102.256,111.615)
N1: (61.540,104.416,110.453)
N2: (61.243,102.253,109.752)
N3: (59.360,103.480,110.308)
N7: (58.999,106.852,111.483)
N9: (57.690,105.107,110.998)
O5': (54.900,107.190,112.923)
O3': (54.720,103.486,113.890)
OP1: (55.216,94.678,114.068)
OP2: (57.053,93.851,112.488)
C3': (55.858,98.333,110.743)
C1': (58.130,99.002,110.778)
C5': (55.960,97.467,113.134)
O4': (57.730,98.699,112.104)
C8: (59.044,96.633,110.535)
O2': (56.534,100.546,109.944)
C6: (62.150,96.932,108.924)
C5: (60.898,96.981,109.552)
C4: (60.302,98.222,109.685)
P: (56.533,94.875,113.424)
C4': (56.283,98.594,112.181)
C2': (56.856,99.169,109.948)
C2: (61.989,99.223,108.680)
N1: (62.680,98.092,108.478)
N3: (60.803,99.397,109.271)
N6: (62.842,95.805,108.759)
N7: (60.094,95.986,110.092)
N9: (59.109,97.997,110.340)
O5': (56.591,96.265,112.650)
O3': (54.518,98.757,110.480)
OP2: (57.053,93.851,112.488)
C3': (55.858,98.333,110.743)
C1': (58.130,99.002,110.778)
C5': (55.960,97.467,113.134)
O4': (57.730,98.699,112.104)
C8: (59.044,96.633,110.535)
O2': (56.534,100.546,109.944)
C6: (62.150,96.932,108.924)
C5: (60.898,96.981,109.552)
C4: (60.302,98.222,109.685)
P: (56.533,94.875,113.424)
C4': (56.283,98.594,112.181)
C2': (56.856,99.169,109.948)
C2: (61.989,99.223,108.680)
N1: (62.680,98.092,108.478)
N3: (60.803,99.397,109.271)
N6: (62.842,95.805,108.759)
N7: (60.094,95.986,110.092)
N9: (59.109,97.997,110.340)
O5': (56.591,96.265,112.650)
O3': (54.518,98.757,110.480)
Image (generated by PyMOL):