Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3SKZ:A23:A20
Extra
PDB:
ATOM 1 O3' U A 22 1.500 13.133 -32.403 1.00106.51 O
ATOM 2 P G A 23 1.390 11.609 -32.848 1.00 89.42 P
ATOM 3 OP1 G A 23 2.171 11.456 -34.099 1.00 90.63 O
ATOM 4 OP2 G A 23 -0.047 11.248 -32.846 1.00 87.98 O
ATOM 5 O5' G A 23 2.125 10.874 -31.652 1.00 77.13 O
ATOM 6 C5' G A 23 3.535 10.723 -31.638 1.00 66.14 C
ATOM 7 C4' G A 23 3.914 9.422 -30.994 1.00 54.65 C
ATOM 8 O4' G A 23 3.070 9.208 -29.829 1.00 53.15 O
ATOM 9 C3' G A 23 3.671 8.176 -31.831 1.00 49.50 C
ATOM 10 O3' G A 23 4.675 7.933 -32.799 1.00 43.69 O
ATOM 11 C2' G A 23 3.553 7.093 -30.770 1.00 44.39 C
ATOM 12 O2' G A 23 4.822 6.777 -30.232 1.00 44.57 O
ATOM 13 C1' G A 23 2.771 7.833 -29.700 1.00 47.53 C
ATOM 14 N9 G A 23 1.320 7.637 -29.856 1.00 44.15 N
ATOM 15 C8 G A 23 0.333 8.546 -30.152 1.00 44.62 C
ATOM 16 N7 G A 23 -0.850 7.984 -30.196 1.00 46.11 N
ATOM 17 C5 G A 23 -0.623 6.639 -29.916 1.00 42.07 C
ATOM 18 C6 G A 23 -1.507 5.531 -29.820 1.00 37.01 C
ATOM 19 O6 G A 23 -2.721 5.494 -29.969 1.00 41.52 O
ATOM 20 N1 G A 23 -0.853 4.346 -29.514 1.00 37.79 N
ATOM 21 C2 G A 23 0.502 4.233 -29.316 1.00 40.02 C
ATOM 22 N2 G A 23 0.950 2.999 -29.031 1.00 35.63 N
ATOM 23 N3 G A 23 1.342 5.254 -29.396 1.00 40.87 N
ATOM 24 C4 G A 23 0.716 6.414 -29.702 1.00 43.32 C
ATOM 25 P G A 24 4.280 7.278 -34.205 1.00 62.28 P
ATOM 26 OP1 G A 24 5.514 7.240 -35.038 1.00 61.82 O
ATOM 27 OP2 G A 24 3.103 8.019 -34.702 1.00 64.06 O
ATOM 28 O5' G A 24 3.863 5.802 -33.800 1.00 36.03 O
TER
ATOM 1 O3' U B 19 9.598 4.351 -22.524 1.00 36.13 O
ATOM 2 P A B 20 9.527 5.933 -22.227 1.00 52.22 P
ATOM 3 OP1 A B 20 10.836 6.507 -22.592 1.00 44.84 O
ATOM 4 OP2 A B 20 9.038 6.097 -20.829 1.00 54.65 O
ATOM 5 O5' A B 20 8.406 6.428 -23.247 1.00 71.52 O
ATOM 6 C5' A B 20 8.441 7.738 -23.785 1.00 65.74 C
ATOM 7 C4' A B 20 7.857 7.788 -25.176 1.00 61.62 C
ATOM 8 O4' A B 20 8.119 6.547 -25.886 1.00 61.61 O
ATOM 9 C3' A B 20 6.351 7.948 -25.269 1.00 60.26 C
ATOM 10 O3' A B 20 5.933 9.284 -25.052 1.00 61.50 O
ATOM 11 C2' A B 20 6.067 7.451 -26.681 1.00 58.37 C
ATOM 12 O2' A B 20 6.387 8.459 -27.631 1.00 49.54 O
ATOM 13 C1' A B 20 7.084 6.310 -26.819 1.00 57.96 C
ATOM 14 N9 A B 20 6.477 4.993 -26.537 1.00 54.01 N
ATOM 15 C8 A B 20 6.718 4.157 -25.486 1.00 53.46 C
ATOM 16 N7 A B 20 6.014 3.053 -25.506 1.00 50.04 N
ATOM 17 C5 A B 20 5.241 3.160 -26.639 1.00 49.30 C
ATOM 18 C6 A B 20 4.277 2.307 -27.215 1.00 42.66 C
ATOM 19 N6 A B 20 3.904 1.124 -26.717 1.00 32.18 N
ATOM 20 N1 A B 20 3.709 2.727 -28.363 1.00 39.94 N
ATOM 21 C2 A B 20 4.076 3.903 -28.883 1.00 35.35 C
ATOM 22 N3 A B 20 4.955 4.788 -28.436 1.00 45.01 N
ATOM 23 C4 A B 20 5.519 4.353 -27.292 1.00 54.35 C
ATOM 24 P A B 21 4.618 9.605 -24.189 1.00 62.83 P
ATOM 25 OP1 A B 21 4.589 11.067 -23.982 1.00 66.75 O
ATOM 26 OP2 A B 21 4.640 8.716 -23.000 1.00 64.55 O
ATOM 27 O5' A B 21 3.436 9.176 -25.167 1.00 65.21 O
TER
ATOM 2 P G A 23 1.390 11.609 -32.848 1.00 89.42 P
ATOM 3 OP1 G A 23 2.171 11.456 -34.099 1.00 90.63 O
ATOM 4 OP2 G A 23 -0.047 11.248 -32.846 1.00 87.98 O
ATOM 5 O5' G A 23 2.125 10.874 -31.652 1.00 77.13 O
ATOM 6 C5' G A 23 3.535 10.723 -31.638 1.00 66.14 C
ATOM 7 C4' G A 23 3.914 9.422 -30.994 1.00 54.65 C
ATOM 8 O4' G A 23 3.070 9.208 -29.829 1.00 53.15 O
ATOM 9 C3' G A 23 3.671 8.176 -31.831 1.00 49.50 C
ATOM 10 O3' G A 23 4.675 7.933 -32.799 1.00 43.69 O
ATOM 11 C2' G A 23 3.553 7.093 -30.770 1.00 44.39 C
ATOM 12 O2' G A 23 4.822 6.777 -30.232 1.00 44.57 O
ATOM 13 C1' G A 23 2.771 7.833 -29.700 1.00 47.53 C
ATOM 14 N9 G A 23 1.320 7.637 -29.856 1.00 44.15 N
ATOM 15 C8 G A 23 0.333 8.546 -30.152 1.00 44.62 C
ATOM 16 N7 G A 23 -0.850 7.984 -30.196 1.00 46.11 N
ATOM 17 C5 G A 23 -0.623 6.639 -29.916 1.00 42.07 C
ATOM 18 C6 G A 23 -1.507 5.531 -29.820 1.00 37.01 C
ATOM 19 O6 G A 23 -2.721 5.494 -29.969 1.00 41.52 O
ATOM 20 N1 G A 23 -0.853 4.346 -29.514 1.00 37.79 N
ATOM 21 C2 G A 23 0.502 4.233 -29.316 1.00 40.02 C
ATOM 22 N2 G A 23 0.950 2.999 -29.031 1.00 35.63 N
ATOM 23 N3 G A 23 1.342 5.254 -29.396 1.00 40.87 N
ATOM 24 C4 G A 23 0.716 6.414 -29.702 1.00 43.32 C
ATOM 25 P G A 24 4.280 7.278 -34.205 1.00 62.28 P
ATOM 26 OP1 G A 24 5.514 7.240 -35.038 1.00 61.82 O
ATOM 27 OP2 G A 24 3.103 8.019 -34.702 1.00 64.06 O
ATOM 28 O5' G A 24 3.863 5.802 -33.800 1.00 36.03 O
TER
ATOM 1 O3' U B 19 9.598 4.351 -22.524 1.00 36.13 O
ATOM 2 P A B 20 9.527 5.933 -22.227 1.00 52.22 P
ATOM 3 OP1 A B 20 10.836 6.507 -22.592 1.00 44.84 O
ATOM 4 OP2 A B 20 9.038 6.097 -20.829 1.00 54.65 O
ATOM 5 O5' A B 20 8.406 6.428 -23.247 1.00 71.52 O
ATOM 6 C5' A B 20 8.441 7.738 -23.785 1.00 65.74 C
ATOM 7 C4' A B 20 7.857 7.788 -25.176 1.00 61.62 C
ATOM 8 O4' A B 20 8.119 6.547 -25.886 1.00 61.61 O
ATOM 9 C3' A B 20 6.351 7.948 -25.269 1.00 60.26 C
ATOM 10 O3' A B 20 5.933 9.284 -25.052 1.00 61.50 O
ATOM 11 C2' A B 20 6.067 7.451 -26.681 1.00 58.37 C
ATOM 12 O2' A B 20 6.387 8.459 -27.631 1.00 49.54 O
ATOM 13 C1' A B 20 7.084 6.310 -26.819 1.00 57.96 C
ATOM 14 N9 A B 20 6.477 4.993 -26.537 1.00 54.01 N
ATOM 15 C8 A B 20 6.718 4.157 -25.486 1.00 53.46 C
ATOM 16 N7 A B 20 6.014 3.053 -25.506 1.00 50.04 N
ATOM 17 C5 A B 20 5.241 3.160 -26.639 1.00 49.30 C
ATOM 18 C6 A B 20 4.277 2.307 -27.215 1.00 42.66 C
ATOM 19 N6 A B 20 3.904 1.124 -26.717 1.00 32.18 N
ATOM 20 N1 A B 20 3.709 2.727 -28.363 1.00 39.94 N
ATOM 21 C2 A B 20 4.076 3.903 -28.883 1.00 35.35 C
ATOM 22 N3 A B 20 4.955 4.788 -28.436 1.00 45.01 N
ATOM 23 C4 A B 20 5.519 4.353 -27.292 1.00 54.35 C
ATOM 24 P A B 21 4.618 9.605 -24.189 1.00 62.83 P
ATOM 25 OP1 A B 21 4.589 11.067 -23.982 1.00 66.75 O
ATOM 26 OP2 A B 21 4.640 8.716 -23.000 1.00 64.55 O
ATOM 27 O5' A B 21 3.436 9.176 -25.167 1.00 65.21 O
TER
Atoms:
OP1: (2.171,11.456,-34.099)
OP2: (-0.047,11.248,-32.846)
C3': (3.671,8.176,-31.831)
C1': (2.771,7.833,-29.700)
C5': (3.535,10.723,-31.638)
O6: (-2.721,5.494,-29.969)
O4': (3.070,9.208,-29.829)
C8: (0.333,8.546,-30.152)
C2: (0.502,4.233,-29.316)
C6: (-1.507,5.531,-29.820)
C5: (-0.623,6.639,-29.916)
C4: (0.716,6.414,-29.702)
P: (1.390,11.609,-32.848)
C4': (3.914,9.422,-30.994)
C2': (3.553,7.093,-30.770)
O2': (4.822,6.777,-30.232)
N1: (-0.853,4.346,-29.514)
N2: (0.950,2.999,-29.031)
N3: (1.342,5.254,-29.396)
N7: (-0.850,7.984,-30.196)
N9: (1.320,7.637,-29.856)
O5': (2.125,10.874,-31.652)
O3': (4.675,7.933,-32.799)
OP2: (-0.047,11.248,-32.846)
C3': (3.671,8.176,-31.831)
C1': (2.771,7.833,-29.700)
C5': (3.535,10.723,-31.638)
O6: (-2.721,5.494,-29.969)
O4': (3.070,9.208,-29.829)
C8: (0.333,8.546,-30.152)
C2: (0.502,4.233,-29.316)
C6: (-1.507,5.531,-29.820)
C5: (-0.623,6.639,-29.916)
C4: (0.716,6.414,-29.702)
P: (1.390,11.609,-32.848)
C4': (3.914,9.422,-30.994)
C2': (3.553,7.093,-30.770)
O2': (4.822,6.777,-30.232)
N1: (-0.853,4.346,-29.514)
N2: (0.950,2.999,-29.031)
N3: (1.342,5.254,-29.396)
N7: (-0.850,7.984,-30.196)
N9: (1.320,7.637,-29.856)
O5': (2.125,10.874,-31.652)
O3': (4.675,7.933,-32.799)
OP1: (10.836,6.507,-22.592)
OP2: (9.038,6.097,-20.829)
C3': (6.351,7.948,-25.269)
C1': (7.084,6.310,-26.819)
C5': (8.441,7.738,-23.785)
O4': (8.119,6.547,-25.886)
C8: (6.718,4.157,-25.486)
O2': (6.387,8.459,-27.631)
C6: (4.277,2.307,-27.215)
C5: (5.241,3.160,-26.639)
C4: (5.519,4.353,-27.292)
P: (9.527,5.933,-22.227)
C4': (7.857,7.788,-25.176)
C2': (6.067,7.451,-26.681)
C2: (4.076,3.903,-28.883)
N1: (3.709,2.727,-28.363)
N3: (4.955,4.788,-28.436)
N6: (3.904,1.124,-26.717)
N7: (6.014,3.053,-25.506)
N9: (6.477,4.993,-26.537)
O5': (8.406,6.428,-23.247)
O3': (5.933,9.284,-25.052)
OP2: (9.038,6.097,-20.829)
C3': (6.351,7.948,-25.269)
C1': (7.084,6.310,-26.819)
C5': (8.441,7.738,-23.785)
O4': (8.119,6.547,-25.886)
C8: (6.718,4.157,-25.486)
O2': (6.387,8.459,-27.631)
C6: (4.277,2.307,-27.215)
C5: (5.241,3.160,-26.639)
C4: (5.519,4.353,-27.292)
P: (9.527,5.933,-22.227)
C4': (7.857,7.788,-25.176)
C2': (6.067,7.451,-26.681)
C2: (4.076,3.903,-28.883)
N1: (3.709,2.727,-28.363)
N3: (4.955,4.788,-28.436)
N6: (3.904,1.124,-26.717)
N7: (6.014,3.053,-25.506)
N9: (6.477,4.993,-26.537)
O5': (8.406,6.428,-23.247)
O3': (5.933,9.284,-25.052)
Image (generated by PyMOL):