Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2PN4:D8:D9
Extra
PDB:
ATOM 1 O3' G A 7 -41.515 -23.030 12.712 1.00 64.24 O
ATOM 2 P U A 8 -42.123 -21.597 12.339 1.00 64.23 P
ATOM 3 OP1 U A 8 -43.383 -21.466 13.104 1.00 64.62 O
ATOM 4 OP2 U A 8 -42.122 -21.460 10.868 1.00 65.48 O
ATOM 5 O5' U A 8 -41.109 -20.515 12.933 1.00 63.71 O
ATOM 6 C5' U A 8 -39.858 -20.186 12.331 1.00 61.46 C
ATOM 7 C4' U A 8 -38.898 -19.742 13.429 1.00 60.53 C
ATOM 8 O4' U A 8 -38.927 -18.302 13.599 1.00 61.16 O
ATOM 9 C3' U A 8 -39.153 -20.329 14.825 1.00 59.37 C
ATOM 10 O3' U A 8 -37.907 -20.716 15.407 1.00 56.60 O
ATOM 11 C2' U A 8 -39.811 -19.181 15.598 1.00 59.60 C
ATOM 12 O2' U A 8 -39.583 -19.236 16.994 1.00 58.92 O
ATOM 13 C1' U A 8 -39.047 -18.013 14.984 1.00 60.37 C
ATOM 14 N1 U A 8 -39.639 -16.647 15.178 1.00 60.53 N
ATOM 15 C2 U A 8 -38.872 -15.705 15.850 1.00 60.53 C
ATOM 16 O2 U A 8 -37.750 -15.928 16.288 1.00 59.19 O
ATOM 17 N3 U A 8 -39.478 -14.478 15.980 1.00 60.77 N
ATOM 18 C4 U A 8 -40.742 -14.116 15.529 1.00 60.65 C
ATOM 19 O4 U A 8 -41.148 -12.975 15.728 1.00 60.27 O
ATOM 20 C5 U A 8 -41.477 -15.154 14.843 1.00 60.33 C
ATOM 21 C6 U A 8 -40.904 -16.354 14.694 1.00 60.10 C
ATOM 22 P G A 9 -37.087 -21.994 14.910 1.00 55.58 P
ATOM 23 OP1 G A 9 -35.713 -21.478 14.666 1.00 55.48 O
ATOM 24 OP2 G A 9 -37.822 -22.713 13.850 1.00 53.57 O
ATOM 25 O5' G A 9 -37.073 -22.933 16.223 1.00 54.90 O
TER
ATOM 1 O3' U B 8 -37.907 -20.716 15.407 1.00 56.60 O
ATOM 2 P G B 9 -37.087 -21.994 14.910 1.00 55.58 P
ATOM 3 OP1 G B 9 -35.713 -21.478 14.666 1.00 55.48 O
ATOM 4 OP2 G B 9 -37.822 -22.713 13.850 1.00 53.57 O
ATOM 5 O5' G B 9 -37.073 -22.933 16.223 1.00 54.90 O
ATOM 6 C5' G B 9 -38.245 -23.564 16.722 1.00 52.69 C
ATOM 7 C4' G B 9 -37.973 -24.932 17.351 1.00 52.38 C
ATOM 8 O4' G B 9 -38.040 -25.965 16.319 1.00 50.35 O
ATOM 9 C3' G B 9 -36.631 -25.128 18.076 1.00 51.76 C
ATOM 10 O3' G B 9 -36.674 -24.732 19.474 1.00 52.35 O
ATOM 11 C2' G B 9 -36.343 -26.623 17.856 1.00 51.90 C
ATOM 12 O2' G B 9 -36.941 -27.509 18.790 1.00 53.07 O
ATOM 13 C1' G B 9 -36.974 -26.895 16.489 1.00 48.90 C
ATOM 14 N9 G B 9 -36.043 -26.825 15.345 1.00 48.66 N
ATOM 15 C8 G B 9 -36.209 -26.058 14.205 1.00 47.86 C
ATOM 16 N7 G B 9 -35.243 -26.189 13.337 1.00 47.35 N
ATOM 17 C5 G B 9 -34.378 -27.102 13.914 1.00 46.93 C
ATOM 18 C6 G B 9 -33.155 -27.630 13.422 1.00 46.66 C
ATOM 19 O6 G B 9 -32.582 -27.396 12.350 1.00 45.97 O
ATOM 20 N1 G B 9 -32.581 -28.519 14.334 1.00 47.40 N
ATOM 21 C2 G B 9 -33.128 -28.870 15.562 1.00 48.08 C
ATOM 22 N2 G B 9 -32.418 -29.738 16.306 1.00 47.68 N
ATOM 23 N3 G B 9 -34.281 -28.392 16.024 1.00 46.31 N
ATOM 24 C4 G B 9 -34.850 -27.503 15.162 1.00 47.44 C
ATOM 25 P C B 10 -35.574 -23.712 20.090 1.00 55.31 P
ATOM 26 OP1 C B 10 -35.893 -23.361 21.495 1.00 57.06 O
ATOM 27 OP2 C B 10 -35.380 -22.604 19.124 1.00 52.53 O
ATOM 28 O5' C B 10 -34.256 -24.600 20.203 1.00 53.72 O
TER
ATOM 2 P U A 8 -42.123 -21.597 12.339 1.00 64.23 P
ATOM 3 OP1 U A 8 -43.383 -21.466 13.104 1.00 64.62 O
ATOM 4 OP2 U A 8 -42.122 -21.460 10.868 1.00 65.48 O
ATOM 5 O5' U A 8 -41.109 -20.515 12.933 1.00 63.71 O
ATOM 6 C5' U A 8 -39.858 -20.186 12.331 1.00 61.46 C
ATOM 7 C4' U A 8 -38.898 -19.742 13.429 1.00 60.53 C
ATOM 8 O4' U A 8 -38.927 -18.302 13.599 1.00 61.16 O
ATOM 9 C3' U A 8 -39.153 -20.329 14.825 1.00 59.37 C
ATOM 10 O3' U A 8 -37.907 -20.716 15.407 1.00 56.60 O
ATOM 11 C2' U A 8 -39.811 -19.181 15.598 1.00 59.60 C
ATOM 12 O2' U A 8 -39.583 -19.236 16.994 1.00 58.92 O
ATOM 13 C1' U A 8 -39.047 -18.013 14.984 1.00 60.37 C
ATOM 14 N1 U A 8 -39.639 -16.647 15.178 1.00 60.53 N
ATOM 15 C2 U A 8 -38.872 -15.705 15.850 1.00 60.53 C
ATOM 16 O2 U A 8 -37.750 -15.928 16.288 1.00 59.19 O
ATOM 17 N3 U A 8 -39.478 -14.478 15.980 1.00 60.77 N
ATOM 18 C4 U A 8 -40.742 -14.116 15.529 1.00 60.65 C
ATOM 19 O4 U A 8 -41.148 -12.975 15.728 1.00 60.27 O
ATOM 20 C5 U A 8 -41.477 -15.154 14.843 1.00 60.33 C
ATOM 21 C6 U A 8 -40.904 -16.354 14.694 1.00 60.10 C
ATOM 22 P G A 9 -37.087 -21.994 14.910 1.00 55.58 P
ATOM 23 OP1 G A 9 -35.713 -21.478 14.666 1.00 55.48 O
ATOM 24 OP2 G A 9 -37.822 -22.713 13.850 1.00 53.57 O
ATOM 25 O5' G A 9 -37.073 -22.933 16.223 1.00 54.90 O
TER
ATOM 1 O3' U B 8 -37.907 -20.716 15.407 1.00 56.60 O
ATOM 2 P G B 9 -37.087 -21.994 14.910 1.00 55.58 P
ATOM 3 OP1 G B 9 -35.713 -21.478 14.666 1.00 55.48 O
ATOM 4 OP2 G B 9 -37.822 -22.713 13.850 1.00 53.57 O
ATOM 5 O5' G B 9 -37.073 -22.933 16.223 1.00 54.90 O
ATOM 6 C5' G B 9 -38.245 -23.564 16.722 1.00 52.69 C
ATOM 7 C4' G B 9 -37.973 -24.932 17.351 1.00 52.38 C
ATOM 8 O4' G B 9 -38.040 -25.965 16.319 1.00 50.35 O
ATOM 9 C3' G B 9 -36.631 -25.128 18.076 1.00 51.76 C
ATOM 10 O3' G B 9 -36.674 -24.732 19.474 1.00 52.35 O
ATOM 11 C2' G B 9 -36.343 -26.623 17.856 1.00 51.90 C
ATOM 12 O2' G B 9 -36.941 -27.509 18.790 1.00 53.07 O
ATOM 13 C1' G B 9 -36.974 -26.895 16.489 1.00 48.90 C
ATOM 14 N9 G B 9 -36.043 -26.825 15.345 1.00 48.66 N
ATOM 15 C8 G B 9 -36.209 -26.058 14.205 1.00 47.86 C
ATOM 16 N7 G B 9 -35.243 -26.189 13.337 1.00 47.35 N
ATOM 17 C5 G B 9 -34.378 -27.102 13.914 1.00 46.93 C
ATOM 18 C6 G B 9 -33.155 -27.630 13.422 1.00 46.66 C
ATOM 19 O6 G B 9 -32.582 -27.396 12.350 1.00 45.97 O
ATOM 20 N1 G B 9 -32.581 -28.519 14.334 1.00 47.40 N
ATOM 21 C2 G B 9 -33.128 -28.870 15.562 1.00 48.08 C
ATOM 22 N2 G B 9 -32.418 -29.738 16.306 1.00 47.68 N
ATOM 23 N3 G B 9 -34.281 -28.392 16.024 1.00 46.31 N
ATOM 24 C4 G B 9 -34.850 -27.503 15.162 1.00 47.44 C
ATOM 25 P C B 10 -35.574 -23.712 20.090 1.00 55.31 P
ATOM 26 OP1 C B 10 -35.893 -23.361 21.495 1.00 57.06 O
ATOM 27 OP2 C B 10 -35.380 -22.604 19.124 1.00 52.53 O
ATOM 28 O5' C B 10 -34.256 -24.600 20.203 1.00 53.72 O
TER
Atoms:
C4: (-40.742,-14.116,15.529)
N3: (-39.478,-14.478,15.980)
OP1: (-43.383,-21.466,13.104)
OP2: (-42.122,-21.460,10.868)
C2: (-38.872,-15.705,15.850)
C1': (-39.047,-18.013,14.984)
C3': (-39.153,-20.329,14.825)
O5': (-41.109,-20.515,12.933)
O4': (-38.927,-18.302,13.599)
C5': (-39.858,-20.186,12.331)
P: (-42.123,-21.597,12.339)
C4': (-38.898,-19.742,13.429)
C2': (-39.811,-19.181,15.598)
O2': (-39.583,-19.236,16.994)
N1: (-39.639,-16.647,15.178)
O4: (-41.148,-12.975,15.728)
O2: (-37.750,-15.928,16.288)
C6: (-40.904,-16.354,14.694)
C5: (-41.477,-15.154,14.843)
O3': (-37.907,-20.716,15.407)
N3: (-39.478,-14.478,15.980)
OP1: (-43.383,-21.466,13.104)
OP2: (-42.122,-21.460,10.868)
C2: (-38.872,-15.705,15.850)
C1': (-39.047,-18.013,14.984)
C3': (-39.153,-20.329,14.825)
O5': (-41.109,-20.515,12.933)
O4': (-38.927,-18.302,13.599)
C5': (-39.858,-20.186,12.331)
P: (-42.123,-21.597,12.339)
C4': (-38.898,-19.742,13.429)
C2': (-39.811,-19.181,15.598)
O2': (-39.583,-19.236,16.994)
N1: (-39.639,-16.647,15.178)
O4: (-41.148,-12.975,15.728)
O2: (-37.750,-15.928,16.288)
C6: (-40.904,-16.354,14.694)
C5: (-41.477,-15.154,14.843)
O3': (-37.907,-20.716,15.407)
OP1: (-35.713,-21.478,14.666)
OP2: (-37.822,-22.713,13.850)
C3': (-36.631,-25.128,18.076)
C1': (-36.974,-26.895,16.489)
C5': (-38.245,-23.564,16.722)
O6: (-32.582,-27.396,12.350)
O4': (-38.040,-25.965,16.319)
C8: (-36.209,-26.058,14.205)
C2: (-33.128,-28.870,15.562)
C6: (-33.155,-27.630,13.422)
C5: (-34.378,-27.102,13.914)
C4: (-34.850,-27.503,15.162)
P: (-37.087,-21.994,14.910)
C4': (-37.973,-24.932,17.351)
C2': (-36.343,-26.623,17.856)
O2': (-36.941,-27.509,18.790)
N1: (-32.581,-28.519,14.334)
N2: (-32.418,-29.738,16.306)
N3: (-34.281,-28.392,16.024)
N7: (-35.243,-26.189,13.337)
N9: (-36.043,-26.825,15.345)
O5': (-37.073,-22.933,16.223)
O3': (-36.674,-24.732,19.474)
OP2: (-37.822,-22.713,13.850)
C3': (-36.631,-25.128,18.076)
C1': (-36.974,-26.895,16.489)
C5': (-38.245,-23.564,16.722)
O6: (-32.582,-27.396,12.350)
O4': (-38.040,-25.965,16.319)
C8: (-36.209,-26.058,14.205)
C2: (-33.128,-28.870,15.562)
C6: (-33.155,-27.630,13.422)
C5: (-34.378,-27.102,13.914)
C4: (-34.850,-27.503,15.162)
P: (-37.087,-21.994,14.910)
C4': (-37.973,-24.932,17.351)
C2': (-36.343,-26.623,17.856)
O2': (-36.941,-27.509,18.790)
N1: (-32.581,-28.519,14.334)
N2: (-32.418,-29.738,16.306)
N3: (-34.281,-28.392,16.024)
N7: (-35.243,-26.189,13.337)
N9: (-36.043,-26.825,15.345)
O5': (-37.073,-22.933,16.223)
O3': (-36.674,-24.732,19.474)
Image (generated by PyMOL):