ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:02332:01017

Extra

PDB:
ATOM 1 O3' A A2331 54.114 109.425 111.527 1.00 32.90 O
ATOM 2 P G A2332 54.551 108.660 112.866 1.00 32.56 P
ATOM 3 OP1 G A2332 53.349 108.621 113.723 1.00 32.95 O
ATOM 4 OP2 G A2332 55.802 109.258 113.388 1.00 32.10 O
ATOM 5 O5' G A2332 54.887 107.186 112.370 1.00 31.47 O
ATOM 6 C5' G A2332 53.846 106.292 111.942 1.00 30.65 C
ATOM 7 C4' G A2332 54.436 104.968 111.511 1.00 30.33 C
ATOM 8 O4' G A2332 55.244 105.166 110.323 1.00 30.00 O
ATOM 9 C3' G A2332 55.391 104.304 112.490 1.00 30.79 C
ATOM 10 O3' G A2332 54.718 103.589 113.519 1.00 32.50 O
ATOM 11 C2' G A2332 56.177 103.390 111.570 1.00 30.88 C
ATOM 12 O2' G A2332 55.420 102.261 111.187 1.00 32.56 O
ATOM 13 C1' G A2332 56.368 104.302 110.359 1.00 29.40 C
ATOM 14 N9 G A2332 57.567 105.125 110.486 1.00 28.61 N
ATOM 15 C8 G A2332 57.634 106.430 110.916 1.00 29.33 C
ATOM 16 N7 G A2332 58.851 106.898 110.947 1.00 29.63 N
ATOM 17 C5 G A2332 59.635 105.839 110.509 1.00 29.30 C
ATOM 18 C6 G A2332 61.038 105.749 110.336 1.00 30.15 C
ATOM 19 O6 G A2332 61.903 106.616 110.557 1.00 31.88 O
ATOM 20 N1 G A2332 61.411 104.499 109.855 1.00 28.37 N
ATOM 21 C2 G A2332 60.550 103.472 109.578 1.00 27.79 C
ATOM 22 N2 G A2332 61.102 102.348 109.094 1.00 26.58 N
ATOM 23 N3 G A2332 59.243 103.539 109.752 1.00 26.99 N
ATOM 24 C4 G A2332 58.857 104.742 110.212 1.00 27.41 C
ATOM 25 P U A2333 55.347 103.545 114.998 1.00 32.60 P
ATOM 26 OP1 U A2333 54.348 102.873 115.860 1.00 33.47 O
ATOM 27 OP2 U A2333 55.825 104.900 115.364 1.00 33.20 O
ATOM 28 O5' U A2333 56.617 102.604 114.831 1.00 30.61 O
TER

ATOM 1 O3' A B1016 57.447 94.941 114.088 1.00 36.07 O
ATOM 2 P A B1017 56.382 94.766 112.902 1.00 36.19 P
ATOM 3 OP1 A B1017 55.035 94.638 113.517 1.00 34.33 O
ATOM 4 OP2 A B1017 56.884 93.696 112.007 1.00 36.04 O
ATOM 5 O5' A B1017 56.456 96.147 112.112 1.00 36.82 O
ATOM 6 C5' A B1017 55.887 97.362 112.649 1.00 37.28 C
ATOM 7 C4' A B1017 56.206 98.522 111.733 1.00 37.88 C
ATOM 8 O4' A B1017 57.645 98.662 111.664 1.00 37.23 O
ATOM 9 C3' A B1017 55.765 98.313 110.291 1.00 38.74 C
ATOM 10 O3' A B1017 54.435 98.793 110.085 1.00 39.58 O
ATOM 11 C2' A B1017 56.774 99.141 109.506 1.00 37.80 C
ATOM 12 O2' A B1017 56.445 100.513 109.494 1.00 39.31 O
ATOM 13 C1' A B1017 58.040 98.952 110.340 1.00 36.27 C
ATOM 14 N9 A B1017 58.946 97.893 109.904 1.00 35.04 N
ATOM 15 C8 A B1017 58.835 96.543 110.111 1.00 34.57 C
ATOM 16 N7 A B1017 59.850 95.854 109.655 1.00 34.82 N
ATOM 17 C5 A B1017 60.679 96.814 109.094 1.00 35.37 C
ATOM 18 C6 A B1017 61.924 96.729 108.447 1.00 37.01 C
ATOM 19 N6 A B1017 62.575 95.583 108.242 1.00 38.30 N
ATOM 20 N1 A B1017 62.487 97.877 108.012 1.00 37.23 N
ATOM 21 C2 A B1017 61.833 99.023 108.212 1.00 37.14 C
ATOM 22 N3 A B1017 60.657 99.230 108.799 1.00 36.97 N
ATOM 23 C4 A B1017 60.128 98.071 109.227 1.00 35.39 C
ATOM 24 P G B1018 53.179 97.892 110.523 1.00 39.80 P
ATOM 25 OP1 G B1018 52.680 98.413 111.829 1.00 37.29 O
ATOM 26 OP2 G B1018 53.572 96.467 110.402 1.00 40.32 O
ATOM 27 O5' G B1018 52.094 98.184 109.397 1.00 38.91 O
TER

Atoms:
OP1: (53.349,108.621,113.723)
OP2: (55.802,109.258,113.388)
C3': (55.391,104.304,112.490)
C1': (56.368,104.302,110.359)
C5': (53.846,106.292,111.942)
O6: (61.903,106.616,110.557)
O4': (55.244,105.166,110.323)
C8: (57.634,106.430,110.916)
C2: (60.550,103.472,109.578)
C6: (61.038,105.749,110.336)
C5: (59.635,105.839,110.509)
C4: (58.857,104.742,110.212)
P: (54.551,108.660,112.866)
C4': (54.436,104.968,111.511)
C2': (56.177,103.390,111.570)
O2': (55.420,102.261,111.187)
N1: (61.411,104.499,109.855)
N2: (61.102,102.348,109.094)
N3: (59.243,103.539,109.752)
N7: (58.851,106.898,110.947)
N9: (57.567,105.125,110.486)
O5': (54.887,107.186,112.370)
O3': (54.718,103.589,113.519)
OP1: (55.035,94.638,113.517)
OP2: (56.884,93.696,112.007)
C3': (55.765,98.313,110.291)
C1': (58.040,98.952,110.340)
C5': (55.887,97.362,112.649)
O4': (57.645,98.662,111.664)
C8: (58.835,96.543,110.111)
O2': (56.445,100.513,109.494)
C6: (61.924,96.729,108.447)
C5: (60.679,96.814,109.094)
C4: (60.128,98.071,109.227)
P: (56.382,94.766,112.902)
C4': (56.206,98.522,111.733)
C2': (56.774,99.141,109.506)
C2: (61.833,99.023,108.212)
N1: (62.487,97.877,108.012)
N3: (60.657,99.230,108.799)
N6: (62.575,95.583,108.242)
N7: (59.850,95.854,109.655)
N9: (58.946,97.893,109.904)
O5': (56.456,96.147,112.112)
O3': (54.435,98.793,110.085)
Image (generated by PyMOL):
PyMOL image
show in jmol