Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0381:0405
Extra
PDB:
ATOM 1 O3' U A 380 71.865 100.563 42.575 1.00 29.51 O
ATOM 2 P G A 381 71.072 100.017 43.853 1.00 31.42 P
ATOM 3 OP1 G A 381 69.735 100.663 43.856 1.00 28.87 O
ATOM 4 OP2 G A 381 71.959 100.166 45.036 1.00 31.64 O
ATOM 5 O5' G A 381 70.919 98.453 43.578 1.00 30.89 O
ATOM 6 C5' G A 381 70.731 97.521 44.675 1.00 29.78 C
ATOM 7 C4' G A 381 70.885 96.096 44.191 1.00 29.92 C
ATOM 8 O4' G A 381 69.877 95.826 43.185 1.00 30.32 O
ATOM 9 C3' G A 381 72.212 95.766 43.527 1.00 29.21 C
ATOM 10 O3' G A 381 73.156 95.328 44.502 1.00 31.04 O
ATOM 11 C2' G A 381 71.850 94.623 42.593 1.00 29.32 C
ATOM 12 O2' G A 381 71.811 93.407 43.302 1.00 29.81 O
ATOM 13 C1' G A 381 70.421 94.995 42.179 1.00 29.80 C
ATOM 14 N9 G A 381 70.235 95.668 40.897 1.00 30.46 N
ATOM 15 C8 G A 381 69.712 96.923 40.710 1.00 29.13 C
ATOM 16 N7 G A 381 69.570 97.238 39.455 1.00 29.81 N
ATOM 17 C5 G A 381 70.046 96.135 38.766 1.00 30.57 C
ATOM 18 C6 G A 381 70.123 95.894 37.372 1.00 31.42 C
ATOM 19 O6 G A 381 69.772 96.630 36.444 1.00 27.65 O
ATOM 20 N1 G A 381 70.672 94.648 37.099 1.00 32.29 N
ATOM 21 C2 G A 381 71.089 93.746 38.045 1.00 33.75 C
ATOM 22 N2 G A 381 71.599 92.593 37.574 1.00 33.97 N
ATOM 23 N3 G A 381 71.013 93.956 39.354 1.00 32.52 N
ATOM 24 C4 G A 381 70.485 95.164 39.639 1.00 30.79 C
ATOM 25 P G A 382 74.703 95.728 44.351 1.00 32.91 P
ATOM 26 OP1 G A 382 75.497 95.126 45.448 1.00 30.78 O
ATOM 27 OP2 G A 382 74.693 97.197 44.182 1.00 34.23 O
ATOM 28 O5' G A 382 75.151 95.040 42.981 1.00 33.08 O
TER
ATOM 1 O3' G B 404 74.729 86.407 27.873 1.00 45.00 O
ATOM 2 P G B 405 75.245 85.946 29.320 1.00 44.49 P
ATOM 3 OP1 G B 405 76.264 84.873 29.144 1.00 46.67 O
ATOM 4 OP2 G B 405 74.026 85.697 30.129 1.00 44.74 O
ATOM 5 O5' G B 405 75.969 87.213 29.940 1.00 42.68 O
ATOM 6 C5' G B 405 77.345 87.151 30.323 1.00 41.06 C
ATOM 7 C4' G B 405 77.474 87.032 31.822 1.00 42.29 C
ATOM 8 O4' G B 405 76.699 88.092 32.451 1.00 42.88 O
ATOM 9 C3' G B 405 77.026 85.723 32.465 1.00 42.66 C
ATOM 10 O3' G B 405 77.983 85.324 33.432 1.00 43.03 O
ATOM 11 C2' G B 405 75.679 86.067 33.103 1.00 42.57 C
ATOM 12 O2' G B 405 75.458 85.348 34.300 1.00 42.06 O
ATOM 13 C1' G B 405 75.831 87.552 33.431 1.00 41.24 C
ATOM 14 N9 G B 405 74.572 88.294 33.361 1.00 37.18 N
ATOM 15 C8 G B 405 73.502 88.029 32.542 1.00 37.85 C
ATOM 16 N7 G B 405 72.546 88.913 32.637 1.00 37.60 N
ATOM 17 C5 G B 405 73.005 89.812 33.588 1.00 38.47 C
ATOM 18 C6 G B 405 72.412 91.011 34.088 1.00 38.82 C
ATOM 19 O6 G B 405 71.345 91.539 33.756 1.00 37.59 O
ATOM 20 N1 G B 405 73.208 91.610 35.058 1.00 38.91 N
ATOM 21 C2 G B 405 74.425 91.133 35.487 1.00 40.41 C
ATOM 22 N2 G B 405 75.035 91.852 36.452 1.00 38.19 N
ATOM 23 N3 G B 405 75.001 90.032 35.009 1.00 38.98 N
ATOM 24 C4 G B 405 74.241 89.428 34.069 1.00 37.75 C
ATOM 25 P C B 406 79.141 84.297 33.000 1.00 45.49 P
ATOM 26 OP1 C B 406 79.923 84.933 31.898 1.00 46.18 O
ATOM 27 OP2 C B 406 78.503 82.978 32.772 1.00 46.58 O
ATOM 28 O5' C B 406 80.078 84.187 34.282 1.00 43.51 O
TER
ATOM 2 P G A 381 71.072 100.017 43.853 1.00 31.42 P
ATOM 3 OP1 G A 381 69.735 100.663 43.856 1.00 28.87 O
ATOM 4 OP2 G A 381 71.959 100.166 45.036 1.00 31.64 O
ATOM 5 O5' G A 381 70.919 98.453 43.578 1.00 30.89 O
ATOM 6 C5' G A 381 70.731 97.521 44.675 1.00 29.78 C
ATOM 7 C4' G A 381 70.885 96.096 44.191 1.00 29.92 C
ATOM 8 O4' G A 381 69.877 95.826 43.185 1.00 30.32 O
ATOM 9 C3' G A 381 72.212 95.766 43.527 1.00 29.21 C
ATOM 10 O3' G A 381 73.156 95.328 44.502 1.00 31.04 O
ATOM 11 C2' G A 381 71.850 94.623 42.593 1.00 29.32 C
ATOM 12 O2' G A 381 71.811 93.407 43.302 1.00 29.81 O
ATOM 13 C1' G A 381 70.421 94.995 42.179 1.00 29.80 C
ATOM 14 N9 G A 381 70.235 95.668 40.897 1.00 30.46 N
ATOM 15 C8 G A 381 69.712 96.923 40.710 1.00 29.13 C
ATOM 16 N7 G A 381 69.570 97.238 39.455 1.00 29.81 N
ATOM 17 C5 G A 381 70.046 96.135 38.766 1.00 30.57 C
ATOM 18 C6 G A 381 70.123 95.894 37.372 1.00 31.42 C
ATOM 19 O6 G A 381 69.772 96.630 36.444 1.00 27.65 O
ATOM 20 N1 G A 381 70.672 94.648 37.099 1.00 32.29 N
ATOM 21 C2 G A 381 71.089 93.746 38.045 1.00 33.75 C
ATOM 22 N2 G A 381 71.599 92.593 37.574 1.00 33.97 N
ATOM 23 N3 G A 381 71.013 93.956 39.354 1.00 32.52 N
ATOM 24 C4 G A 381 70.485 95.164 39.639 1.00 30.79 C
ATOM 25 P G A 382 74.703 95.728 44.351 1.00 32.91 P
ATOM 26 OP1 G A 382 75.497 95.126 45.448 1.00 30.78 O
ATOM 27 OP2 G A 382 74.693 97.197 44.182 1.00 34.23 O
ATOM 28 O5' G A 382 75.151 95.040 42.981 1.00 33.08 O
TER
ATOM 1 O3' G B 404 74.729 86.407 27.873 1.00 45.00 O
ATOM 2 P G B 405 75.245 85.946 29.320 1.00 44.49 P
ATOM 3 OP1 G B 405 76.264 84.873 29.144 1.00 46.67 O
ATOM 4 OP2 G B 405 74.026 85.697 30.129 1.00 44.74 O
ATOM 5 O5' G B 405 75.969 87.213 29.940 1.00 42.68 O
ATOM 6 C5' G B 405 77.345 87.151 30.323 1.00 41.06 C
ATOM 7 C4' G B 405 77.474 87.032 31.822 1.00 42.29 C
ATOM 8 O4' G B 405 76.699 88.092 32.451 1.00 42.88 O
ATOM 9 C3' G B 405 77.026 85.723 32.465 1.00 42.66 C
ATOM 10 O3' G B 405 77.983 85.324 33.432 1.00 43.03 O
ATOM 11 C2' G B 405 75.679 86.067 33.103 1.00 42.57 C
ATOM 12 O2' G B 405 75.458 85.348 34.300 1.00 42.06 O
ATOM 13 C1' G B 405 75.831 87.552 33.431 1.00 41.24 C
ATOM 14 N9 G B 405 74.572 88.294 33.361 1.00 37.18 N
ATOM 15 C8 G B 405 73.502 88.029 32.542 1.00 37.85 C
ATOM 16 N7 G B 405 72.546 88.913 32.637 1.00 37.60 N
ATOM 17 C5 G B 405 73.005 89.812 33.588 1.00 38.47 C
ATOM 18 C6 G B 405 72.412 91.011 34.088 1.00 38.82 C
ATOM 19 O6 G B 405 71.345 91.539 33.756 1.00 37.59 O
ATOM 20 N1 G B 405 73.208 91.610 35.058 1.00 38.91 N
ATOM 21 C2 G B 405 74.425 91.133 35.487 1.00 40.41 C
ATOM 22 N2 G B 405 75.035 91.852 36.452 1.00 38.19 N
ATOM 23 N3 G B 405 75.001 90.032 35.009 1.00 38.98 N
ATOM 24 C4 G B 405 74.241 89.428 34.069 1.00 37.75 C
ATOM 25 P C B 406 79.141 84.297 33.000 1.00 45.49 P
ATOM 26 OP1 C B 406 79.923 84.933 31.898 1.00 46.18 O
ATOM 27 OP2 C B 406 78.503 82.978 32.772 1.00 46.58 O
ATOM 28 O5' C B 406 80.078 84.187 34.282 1.00 43.51 O
TER
Atoms:
OP1: (69.735,100.663,43.856)
OP2: (71.959,100.166,45.036)
C3': (72.212,95.766,43.527)
C1': (70.421,94.995,42.179)
C5': (70.731,97.521,44.675)
O6: (69.772,96.630,36.444)
O4': (69.877,95.826,43.185)
C8: (69.712,96.923,40.710)
C2: (71.089,93.746,38.045)
C6: (70.123,95.894,37.372)
C5: (70.046,96.135,38.766)
C4: (70.485,95.164,39.639)
P: (71.072,100.017,43.853)
C4': (70.885,96.096,44.191)
C2': (71.850,94.623,42.593)
O2': (71.811,93.407,43.302)
N1: (70.672,94.648,37.099)
N2: (71.599,92.593,37.574)
N3: (71.013,93.956,39.354)
N7: (69.570,97.238,39.455)
N9: (70.235,95.668,40.897)
O5': (70.919,98.453,43.578)
O3': (73.156,95.328,44.502)
OP2: (71.959,100.166,45.036)
C3': (72.212,95.766,43.527)
C1': (70.421,94.995,42.179)
C5': (70.731,97.521,44.675)
O6: (69.772,96.630,36.444)
O4': (69.877,95.826,43.185)
C8: (69.712,96.923,40.710)
C2: (71.089,93.746,38.045)
C6: (70.123,95.894,37.372)
C5: (70.046,96.135,38.766)
C4: (70.485,95.164,39.639)
P: (71.072,100.017,43.853)
C4': (70.885,96.096,44.191)
C2': (71.850,94.623,42.593)
O2': (71.811,93.407,43.302)
N1: (70.672,94.648,37.099)
N2: (71.599,92.593,37.574)
N3: (71.013,93.956,39.354)
N7: (69.570,97.238,39.455)
N9: (70.235,95.668,40.897)
O5': (70.919,98.453,43.578)
O3': (73.156,95.328,44.502)
OP1: (76.264,84.873,29.144)
OP2: (74.026,85.697,30.129)
C3': (77.026,85.723,32.465)
C1': (75.831,87.552,33.431)
C5': (77.345,87.151,30.323)
O6: (71.345,91.539,33.756)
O4': (76.699,88.092,32.451)
C8: (73.502,88.029,32.542)
C2: (74.425,91.133,35.487)
C6: (72.412,91.011,34.088)
C5: (73.005,89.812,33.588)
C4: (74.241,89.428,34.069)
P: (75.245,85.946,29.320)
C4': (77.474,87.032,31.822)
C2': (75.679,86.067,33.103)
O2': (75.458,85.348,34.300)
N1: (73.208,91.610,35.058)
N2: (75.035,91.852,36.452)
N3: (75.001,90.032,35.009)
N7: (72.546,88.913,32.637)
N9: (74.572,88.294,33.361)
O5': (75.969,87.213,29.940)
O3': (77.983,85.324,33.432)
OP2: (74.026,85.697,30.129)
C3': (77.026,85.723,32.465)
C1': (75.831,87.552,33.431)
C5': (77.345,87.151,30.323)
O6: (71.345,91.539,33.756)
O4': (76.699,88.092,32.451)
C8: (73.502,88.029,32.542)
C2: (74.425,91.133,35.487)
C6: (72.412,91.011,34.088)
C5: (73.005,89.812,33.588)
C4: (74.241,89.428,34.069)
P: (75.245,85.946,29.320)
C4': (77.474,87.032,31.822)
C2': (75.679,86.067,33.103)
O2': (75.458,85.348,34.300)
N1: (73.208,91.610,35.058)
N2: (75.035,91.852,36.452)
N3: (75.001,90.032,35.009)
N7: (72.546,88.913,32.637)
N9: (74.572,88.294,33.361)
O5': (75.969,87.213,29.940)
O3': (77.983,85.324,33.432)
Image (generated by PyMOL):