Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0381:0405
Extra
PDB:
ATOM 1 O3' U A 380 71.897 100.423 42.507 1.00 35.31 O
ATOM 2 P G A 381 71.136 99.873 43.804 1.00 35.30 P
ATOM 3 OP1 G A 381 69.795 100.500 43.851 1.00 35.70 O
ATOM 4 OP2 G A 381 72.052 100.010 44.962 1.00 36.10 O
ATOM 5 O5' G A 381 70.967 98.313 43.544 1.00 37.68 O
ATOM 6 C5' G A 381 70.800 97.394 44.651 1.00 37.99 C
ATOM 7 C4' G A 381 70.958 95.973 44.174 1.00 38.04 C
ATOM 8 O4' G A 381 69.965 95.717 43.153 1.00 39.17 O
ATOM 9 C3' G A 381 72.291 95.670 43.514 1.00 36.84 C
ATOM 10 O3' G A 381 73.222 95.238 44.493 1.00 37.43 O
ATOM 11 C2' G A 381 71.950 94.539 42.558 1.00 37.68 C
ATOM 12 O2' G A 381 71.902 93.297 43.222 1.00 37.07 O
ATOM 13 C1' G A 381 70.528 94.910 42.138 1.00 38.79 C
ATOM 14 N9 G A 381 70.364 95.601 40.863 1.00 38.77 N
ATOM 15 C8 G A 381 69.859 96.863 40.677 1.00 39.48 C
ATOM 16 N7 G A 381 69.717 97.177 39.419 1.00 41.03 N
ATOM 17 C5 G A 381 70.181 96.067 38.733 1.00 39.70 C
ATOM 18 C6 G A 381 70.257 95.823 37.348 1.00 39.21 C
ATOM 19 O6 G A 381 69.926 96.560 36.423 1.00 38.60 O
ATOM 20 N1 G A 381 70.787 94.571 37.078 1.00 39.79 N
ATOM 21 C2 G A 381 71.204 93.671 38.023 1.00 41.31 C
ATOM 22 N2 G A 381 71.708 92.513 37.557 1.00 42.55 N
ATOM 23 N3 G A 381 71.138 93.888 39.327 1.00 40.29 N
ATOM 24 C4 G A 381 70.614 95.097 39.608 1.00 39.04 C
ATOM 25 P G A 382 74.769 95.619 44.339 1.00 39.49 P
ATOM 26 OP1 G A 382 75.525 95.019 45.470 1.00 37.39 O
ATOM 27 OP2 G A 382 74.782 97.086 44.148 1.00 41.13 O
ATOM 28 O5' G A 382 75.222 94.940 42.966 1.00 38.71 O
TER
ATOM 1 O3' G B 404 74.756 86.374 27.803 1.00 49.77 O
ATOM 2 P G B 405 75.255 85.925 29.261 1.00 49.84 P
ATOM 3 OP1 G B 405 76.278 84.856 29.117 1.00 50.67 O
ATOM 4 OP2 G B 405 74.026 85.678 30.048 1.00 50.22 O
ATOM 5 O5' G B 405 75.953 87.199 29.893 1.00 48.15 O
ATOM 6 C5' G B 405 77.333 87.160 30.262 1.00 48.47 C
ATOM 7 C4' G B 405 77.484 87.008 31.758 1.00 48.86 C
ATOM 8 O4' G B 405 76.717 88.053 32.415 1.00 50.03 O
ATOM 9 C3' G B 405 77.062 85.691 32.398 1.00 48.42 C
ATOM 10 O3' G B 405 78.007 85.337 33.398 1.00 49.54 O
ATOM 11 C2' G B 405 75.703 86.012 33.022 1.00 48.56 C
ATOM 12 O2' G B 405 75.489 85.288 34.215 1.00 47.27 O
ATOM 13 C1' G B 405 75.833 87.494 33.367 1.00 48.13 C
ATOM 14 N9 G B 405 74.575 88.235 33.265 1.00 47.61 N
ATOM 15 C8 G B 405 73.525 87.974 32.415 1.00 47.80 C
ATOM 16 N7 G B 405 72.567 88.855 32.494 1.00 47.28 N
ATOM 17 C5 G B 405 73.002 89.748 33.462 1.00 48.68 C
ATOM 18 C6 G B 405 72.393 90.930 33.960 1.00 49.60 C
ATOM 19 O6 G B 405 71.325 91.448 33.617 1.00 50.36 O
ATOM 20 N1 G B 405 73.166 91.528 34.950 1.00 49.71 N
ATOM 21 C2 G B 405 74.376 91.060 35.398 1.00 50.30 C
ATOM 22 N2 G B 405 74.966 91.776 36.376 1.00 49.54 N
ATOM 23 N3 G B 405 74.966 89.968 34.926 1.00 49.82 N
ATOM 24 C4 G B 405 74.228 89.367 33.967 1.00 48.45 C
ATOM 25 P C B 406 79.184 84.304 33.037 1.00 52.00 P
ATOM 26 OP1 C B 406 80.062 84.928 32.004 1.00 51.43 O
ATOM 27 OP2 C B 406 78.553 82.989 32.764 1.00 51.82 O
ATOM 28 O5' C B 406 80.021 84.164 34.382 1.00 50.03 O
TER
ATOM 2 P G A 381 71.136 99.873 43.804 1.00 35.30 P
ATOM 3 OP1 G A 381 69.795 100.500 43.851 1.00 35.70 O
ATOM 4 OP2 G A 381 72.052 100.010 44.962 1.00 36.10 O
ATOM 5 O5' G A 381 70.967 98.313 43.544 1.00 37.68 O
ATOM 6 C5' G A 381 70.800 97.394 44.651 1.00 37.99 C
ATOM 7 C4' G A 381 70.958 95.973 44.174 1.00 38.04 C
ATOM 8 O4' G A 381 69.965 95.717 43.153 1.00 39.17 O
ATOM 9 C3' G A 381 72.291 95.670 43.514 1.00 36.84 C
ATOM 10 O3' G A 381 73.222 95.238 44.493 1.00 37.43 O
ATOM 11 C2' G A 381 71.950 94.539 42.558 1.00 37.68 C
ATOM 12 O2' G A 381 71.902 93.297 43.222 1.00 37.07 O
ATOM 13 C1' G A 381 70.528 94.910 42.138 1.00 38.79 C
ATOM 14 N9 G A 381 70.364 95.601 40.863 1.00 38.77 N
ATOM 15 C8 G A 381 69.859 96.863 40.677 1.00 39.48 C
ATOM 16 N7 G A 381 69.717 97.177 39.419 1.00 41.03 N
ATOM 17 C5 G A 381 70.181 96.067 38.733 1.00 39.70 C
ATOM 18 C6 G A 381 70.257 95.823 37.348 1.00 39.21 C
ATOM 19 O6 G A 381 69.926 96.560 36.423 1.00 38.60 O
ATOM 20 N1 G A 381 70.787 94.571 37.078 1.00 39.79 N
ATOM 21 C2 G A 381 71.204 93.671 38.023 1.00 41.31 C
ATOM 22 N2 G A 381 71.708 92.513 37.557 1.00 42.55 N
ATOM 23 N3 G A 381 71.138 93.888 39.327 1.00 40.29 N
ATOM 24 C4 G A 381 70.614 95.097 39.608 1.00 39.04 C
ATOM 25 P G A 382 74.769 95.619 44.339 1.00 39.49 P
ATOM 26 OP1 G A 382 75.525 95.019 45.470 1.00 37.39 O
ATOM 27 OP2 G A 382 74.782 97.086 44.148 1.00 41.13 O
ATOM 28 O5' G A 382 75.222 94.940 42.966 1.00 38.71 O
TER
ATOM 1 O3' G B 404 74.756 86.374 27.803 1.00 49.77 O
ATOM 2 P G B 405 75.255 85.925 29.261 1.00 49.84 P
ATOM 3 OP1 G B 405 76.278 84.856 29.117 1.00 50.67 O
ATOM 4 OP2 G B 405 74.026 85.678 30.048 1.00 50.22 O
ATOM 5 O5' G B 405 75.953 87.199 29.893 1.00 48.15 O
ATOM 6 C5' G B 405 77.333 87.160 30.262 1.00 48.47 C
ATOM 7 C4' G B 405 77.484 87.008 31.758 1.00 48.86 C
ATOM 8 O4' G B 405 76.717 88.053 32.415 1.00 50.03 O
ATOM 9 C3' G B 405 77.062 85.691 32.398 1.00 48.42 C
ATOM 10 O3' G B 405 78.007 85.337 33.398 1.00 49.54 O
ATOM 11 C2' G B 405 75.703 86.012 33.022 1.00 48.56 C
ATOM 12 O2' G B 405 75.489 85.288 34.215 1.00 47.27 O
ATOM 13 C1' G B 405 75.833 87.494 33.367 1.00 48.13 C
ATOM 14 N9 G B 405 74.575 88.235 33.265 1.00 47.61 N
ATOM 15 C8 G B 405 73.525 87.974 32.415 1.00 47.80 C
ATOM 16 N7 G B 405 72.567 88.855 32.494 1.00 47.28 N
ATOM 17 C5 G B 405 73.002 89.748 33.462 1.00 48.68 C
ATOM 18 C6 G B 405 72.393 90.930 33.960 1.00 49.60 C
ATOM 19 O6 G B 405 71.325 91.448 33.617 1.00 50.36 O
ATOM 20 N1 G B 405 73.166 91.528 34.950 1.00 49.71 N
ATOM 21 C2 G B 405 74.376 91.060 35.398 1.00 50.30 C
ATOM 22 N2 G B 405 74.966 91.776 36.376 1.00 49.54 N
ATOM 23 N3 G B 405 74.966 89.968 34.926 1.00 49.82 N
ATOM 24 C4 G B 405 74.228 89.367 33.967 1.00 48.45 C
ATOM 25 P C B 406 79.184 84.304 33.037 1.00 52.00 P
ATOM 26 OP1 C B 406 80.062 84.928 32.004 1.00 51.43 O
ATOM 27 OP2 C B 406 78.553 82.989 32.764 1.00 51.82 O
ATOM 28 O5' C B 406 80.021 84.164 34.382 1.00 50.03 O
TER
Atoms:
OP1: (69.795,100.500,43.851)
OP2: (72.052,100.010,44.962)
C3': (72.291,95.670,43.514)
C1': (70.528,94.910,42.138)
C5': (70.800,97.394,44.651)
O6: (69.926,96.560,36.423)
O4': (69.965,95.717,43.153)
C8: (69.859,96.863,40.677)
C2: (71.204,93.671,38.023)
C6: (70.257,95.823,37.348)
C5: (70.181,96.067,38.733)
C4: (70.614,95.097,39.608)
P: (71.136,99.873,43.804)
C4': (70.958,95.973,44.174)
C2': (71.950,94.539,42.558)
O2': (71.902,93.297,43.222)
N1: (70.787,94.571,37.078)
N2: (71.708,92.513,37.557)
N3: (71.138,93.888,39.327)
N7: (69.717,97.177,39.419)
N9: (70.364,95.601,40.863)
O5': (70.967,98.313,43.544)
O3': (73.222,95.238,44.493)
OP2: (72.052,100.010,44.962)
C3': (72.291,95.670,43.514)
C1': (70.528,94.910,42.138)
C5': (70.800,97.394,44.651)
O6: (69.926,96.560,36.423)
O4': (69.965,95.717,43.153)
C8: (69.859,96.863,40.677)
C2: (71.204,93.671,38.023)
C6: (70.257,95.823,37.348)
C5: (70.181,96.067,38.733)
C4: (70.614,95.097,39.608)
P: (71.136,99.873,43.804)
C4': (70.958,95.973,44.174)
C2': (71.950,94.539,42.558)
O2': (71.902,93.297,43.222)
N1: (70.787,94.571,37.078)
N2: (71.708,92.513,37.557)
N3: (71.138,93.888,39.327)
N7: (69.717,97.177,39.419)
N9: (70.364,95.601,40.863)
O5': (70.967,98.313,43.544)
O3': (73.222,95.238,44.493)
OP1: (76.278,84.856,29.117)
OP2: (74.026,85.678,30.048)
C3': (77.062,85.691,32.398)
C1': (75.833,87.494,33.367)
C5': (77.333,87.160,30.262)
O6: (71.325,91.448,33.617)
O4': (76.717,88.053,32.415)
C8: (73.525,87.974,32.415)
C2: (74.376,91.060,35.398)
C6: (72.393,90.930,33.960)
C5: (73.002,89.748,33.462)
C4: (74.228,89.367,33.967)
P: (75.255,85.925,29.261)
C4': (77.484,87.008,31.758)
C2': (75.703,86.012,33.022)
O2': (75.489,85.288,34.215)
N1: (73.166,91.528,34.950)
N2: (74.966,91.776,36.376)
N3: (74.966,89.968,34.926)
N7: (72.567,88.855,32.494)
N9: (74.575,88.235,33.265)
O5': (75.953,87.199,29.893)
O3': (78.007,85.337,33.398)
OP2: (74.026,85.678,30.048)
C3': (77.062,85.691,32.398)
C1': (75.833,87.494,33.367)
C5': (77.333,87.160,30.262)
O6: (71.325,91.448,33.617)
O4': (76.717,88.053,32.415)
C8: (73.525,87.974,32.415)
C2: (74.376,91.060,35.398)
C6: (72.393,90.930,33.960)
C5: (73.002,89.748,33.462)
C4: (74.228,89.367,33.967)
P: (75.255,85.925,29.261)
C4': (77.484,87.008,31.758)
C2': (75.703,86.012,33.022)
O2': (75.489,85.288,34.215)
N1: (73.166,91.528,34.950)
N2: (74.966,91.776,36.376)
N3: (74.966,89.968,34.926)
N7: (72.567,88.855,32.494)
N9: (74.575,88.235,33.265)
O5': (75.953,87.199,29.893)
O3': (78.007,85.337,33.398)
Image (generated by PyMOL):