ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1XJR:A10:A32

Extra

PDB:
ATOM 1 O3' C A 9 49.930 28.573 47.867 1.00 73.54 O
ATOM 2 P G A 10 48.341 28.657 47.977 1.00 75.21 P
ATOM 3 OP1 G A 10 47.745 27.311 47.994 1.00 76.44 O
ATOM 4 OP2 G A 10 47.755 29.717 47.112 1.00 74.71 O
ATOM 5 O5' G A 10 48.350 29.179 49.484 1.00 78.02 O
ATOM 6 C5' G A 10 47.214 29.082 50.345 1.00 78.18 C
ATOM 7 C4' G A 10 47.568 29.767 51.654 1.00 78.08 C
ATOM 8 O4' G A 10 48.929 29.459 52.091 1.00 78.83 O
ATOM 9 C3' G A 10 47.601 31.282 51.580 1.00 76.25 C
ATOM 10 O3' G A 10 46.285 31.781 51.485 1.00 73.27 O
ATOM 11 C2' G A 10 48.298 31.556 52.911 1.00 76.66 C
ATOM 12 O2' G A 10 47.462 31.209 53.994 1.00 77.78 O
ATOM 13 C1' G A 10 49.437 30.542 52.869 1.00 77.63 C
ATOM 14 N9 G A 10 50.704 30.974 52.271 1.00 77.64 N
ATOM 15 C8 G A 10 51.138 30.635 51.013 1.00 77.70 C
ATOM 16 N7 G A 10 52.304 31.143 50.710 1.00 78.03 N
ATOM 17 C5 G A 10 52.677 31.865 51.825 1.00 77.63 C
ATOM 18 C6 G A 10 53.852 32.625 52.069 1.00 78.59 C
ATOM 19 O6 G A 10 54.822 32.815 51.329 1.00 78.37 O
ATOM 20 N1 G A 10 53.859 33.216 53.329 1.00 78.54 N
ATOM 21 C2 G A 10 52.843 33.070 54.234 1.00 77.58 C
ATOM 22 N2 G A 10 53.026 33.703 55.390 1.00 77.39 N
ATOM 23 N3 G A 10 51.741 32.357 54.019 1.00 77.84 N
ATOM 24 C4 G A 10 51.708 31.772 52.799 1.00 77.34 C
ATOM 25 P A A 11 46.062 33.231 50.878 1.00 74.19 P
ATOM 26 OP1 A A 11 44.640 33.728 50.964 1.00 73.85 O
ATOM 27 OP2 A A 11 46.748 33.247 49.569 1.00 73.80 O
ATOM 28 O5' A A 11 46.936 34.089 51.899 1.00 73.67 O
TER

ATOM 1 O3' G B 31 40.190 35.552 56.453 1.00 69.91 O
ATOM 2 P A B 32 41.707 36.041 56.596 1.00 67.93 P
ATOM 3 OP1 A B 32 41.835 36.483 58.012 1.00 69.31 O
ATOM 4 OP2 A B 32 42.116 36.848 55.429 1.00 67.72 O
ATOM 5 O5' A B 32 42.572 34.731 56.421 1.00 66.23 O
ATOM 6 C5' A B 32 42.448 33.977 55.258 1.00 65.74 C
ATOM 7 C4' A B 32 43.388 32.819 55.464 1.00 68.11 C
ATOM 8 O4' A B 32 44.737 33.334 55.427 1.00 69.43 O
ATOM 9 C3' A B 32 43.236 32.107 56.809 1.00 66.82 C
ATOM 10 O3' A B 32 43.170 30.729 56.498 1.00 66.91 O
ATOM 11 C2' A B 32 44.489 32.486 57.584 1.00 66.47 C
ATOM 12 O2' A B 32 45.015 31.459 58.400 1.00 66.50 O
ATOM 13 C1' A B 32 45.474 32.736 56.458 1.00 68.93 C
ATOM 14 N9 A B 32 46.519 33.656 56.861 1.00 69.93 N
ATOM 15 C8 A B 32 46.362 34.901 57.404 1.00 69.95 C
ATOM 16 N7 A B 32 47.497 35.492 57.704 1.00 70.68 N
ATOM 17 C5 A B 32 48.460 34.582 57.321 1.00 71.05 C
ATOM 18 C6 A B 32 49.870 34.615 57.355 1.00 70.37 C
ATOM 19 N6 A B 32 50.569 35.648 57.820 1.00 69.50 N
ATOM 20 N1 A B 32 50.527 33.530 56.885 1.00 70.00 N
ATOM 21 C2 A B 32 49.824 32.488 56.414 1.00 69.27 C
ATOM 22 N3 A B 32 48.504 32.347 56.329 1.00 69.07 N
ATOM 23 C4 A B 32 47.874 33.435 56.800 1.00 70.52 C
ATOM 24 P G B 33 42.185 29.720 57.260 1.00 65.13 P
ATOM 25 OP1 G B 33 41.833 30.255 58.586 1.00 63.60 O
ATOM 26 OP2 G B 33 42.826 28.379 57.136 1.00 69.55 O
ATOM 27 O5' G B 33 40.928 29.689 56.301 1.00 65.45 O
TER

Atoms:
OP1: (47.745,27.311,47.994)
OP2: (47.755,29.717,47.112)
C3': (47.601,31.282,51.580)
C1': (49.437,30.542,52.869)
C5': (47.214,29.082,50.345)
O6: (54.822,32.815,51.329)
O4': (48.929,29.459,52.091)
C8: (51.138,30.635,51.013)
C2: (52.843,33.070,54.234)
C6: (53.852,32.625,52.069)
C5: (52.677,31.865,51.825)
C4: (51.708,31.772,52.799)
P: (48.341,28.657,47.977)
C4': (47.568,29.767,51.654)
C2': (48.298,31.556,52.911)
O2': (47.462,31.209,53.994)
N1: (53.859,33.216,53.329)
N2: (53.026,33.703,55.390)
N3: (51.741,32.357,54.019)
N7: (52.304,31.143,50.710)
N9: (50.704,30.974,52.271)
O5': (48.350,29.179,49.484)
O3': (46.285,31.781,51.485)
OP1: (41.835,36.483,58.012)
OP2: (42.116,36.848,55.429)
C3': (43.236,32.107,56.809)
C1': (45.474,32.736,56.458)
C5': (42.448,33.977,55.258)
O4': (44.737,33.334,55.427)
C8: (46.362,34.901,57.404)
O2': (45.015,31.459,58.400)
C6: (49.870,34.615,57.355)
C5: (48.460,34.582,57.321)
C4: (47.874,33.435,56.800)
P: (41.707,36.041,56.596)
C4': (43.388,32.819,55.464)
C2': (44.489,32.486,57.584)
C2: (49.824,32.488,56.414)
N1: (50.527,33.530,56.885)
N3: (48.504,32.347,56.329)
N6: (50.569,35.648,57.820)
N7: (47.497,35.492,57.704)
N9: (46.519,33.656,56.861)
O5': (42.572,34.731,56.421)
O3': (43.170,30.729,56.498)
Image (generated by PyMOL):
PyMOL image
show in jmol