Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1040:A1041
Extra
PDB:
ATOM 1 O3' A A1039 129.458 -69.638 31.525 1.00 68.93 O
ATOM 2 P U A1040 131.050 -69.863 31.587 1.00 72.59 P
ATOM 3 OP1 U A1040 131.599 -68.693 32.341 1.00 63.00 O
ATOM 4 OP2 U A1040 131.520 -70.131 30.192 1.00 59.42 O
ATOM 5 O5' U A1040 131.218 -71.198 32.468 1.00 68.57 O
ATOM 6 C5' U A1040 131.808 -72.372 31.896 1.00 77.36 C
ATOM 7 C4' U A1040 131.607 -73.583 32.785 1.00 82.35 C
ATOM 8 O4' U A1040 132.586 -73.583 33.839 1.00 83.48 O
ATOM 9 C3' U A1040 130.271 -73.707 33.516 1.00 76.25 C
ATOM 10 O3' U A1040 129.184 -74.332 32.812 1.00 73.82 O
ATOM 11 C2' U A1040 130.619 -74.620 34.698 1.00 80.13 C
ATOM 12 O2' U A1040 130.383 -75.997 34.484 1.00 84.43 O
ATOM 13 C1' U A1040 132.126 -74.415 34.875 1.00 85.90 C
ATOM 14 N1 U A1040 132.487 -73.833 36.172 1.00 87.78 N
ATOM 15 C2 U A1040 133.365 -74.544 36.969 1.00 85.84 C
ATOM 16 O2 U A1040 133.889 -75.591 36.623 1.00 82.90 O
ATOM 17 N3 U A1040 133.608 -73.977 38.194 1.00 92.34 N
ATOM 18 C4 U A1040 133.078 -72.791 38.691 1.00101.24 C
ATOM 19 O4 U A1040 133.322 -72.454 39.858 1.00108.45 O
ATOM 20 C5 U A1040 132.205 -72.105 37.787 1.00 93.49 C
ATOM 21 C6 U A1040 131.948 -72.636 36.589 1.00 92.89 C
ATOM 22 P G A1041 129.152 -74.484 31.197 1.00 71.97 P
ATOM 23 OP1 G A1041 130.302 -73.930 30.446 1.00 69.75 O
ATOM 24 OP2 G A1041 127.775 -74.094 30.818 1.00 71.40 O
ATOM 25 O5' G A1041 129.202 -76.056 30.988 1.00 75.04 O
TER
ATOM 1 O3' U B1040 129.184 -74.332 32.812 1.00 73.82 O
ATOM 2 P G B1041 129.152 -74.484 31.197 1.00 71.97 P
ATOM 3 OP1 G B1041 130.302 -73.930 30.446 1.00 69.75 O
ATOM 4 OP2 G B1041 127.775 -74.094 30.818 1.00 71.40 O
ATOM 5 O5' G B1041 129.202 -76.056 30.988 1.00 75.04 O
ATOM 6 C5' G B1041 128.684 -76.896 31.996 1.00 67.88 C
ATOM 7 C4' G B1041 127.640 -77.803 31.437 1.00 61.86 C
ATOM 8 O4' G B1041 126.909 -77.163 30.357 1.00 60.66 O
ATOM 9 C3' G B1041 128.202 -79.062 30.820 1.00 70.04 C
ATOM 10 O3' G B1041 128.462 -79.977 31.881 1.00 83.07 O
ATOM 11 C2' G B1041 127.071 -79.479 29.885 1.00 62.54 C
ATOM 12 O2' G B1041 126.007 -80.083 30.591 1.00 53.41 O
ATOM 13 C1' G B1041 126.590 -78.124 29.360 1.00 60.85 C
ATOM 14 N9 G B1041 127.245 -77.733 28.108 1.00 60.75 N
ATOM 15 C8 G B1041 127.979 -76.588 27.887 1.00 63.04 C
ATOM 16 N7 G B1041 128.463 -76.514 26.676 1.00 61.33 N
ATOM 17 C5 G B1041 128.021 -77.676 26.046 1.00 53.80 C
ATOM 18 C6 G B1041 128.240 -78.151 24.708 1.00 53.66 C
ATOM 19 O6 G B1041 128.882 -77.618 23.789 1.00 50.30 O
ATOM 20 N1 G B1041 127.622 -79.376 24.490 1.00 53.43 N
ATOM 21 C2 G B1041 126.891 -80.062 25.421 1.00 55.13 C
ATOM 22 N2 G B1041 126.388 -81.231 25.008 1.00 48.94 N
ATOM 23 N3 G B1041 126.671 -79.634 26.666 1.00 56.68 N
ATOM 24 C4 G B1041 127.264 -78.441 26.910 1.00 55.08 C
ATOM 25 P U B1042 129.538 -81.158 31.690 1.00 71.95 P
ATOM 26 OP1 U B1042 129.573 -81.941 32.962 1.00 73.00 O
ATOM 27 OP2 U B1042 130.789 -80.594 31.120 1.00 67.40 O
ATOM 28 O5' U B1042 128.883 -82.048 30.555 1.00 67.09 O
TER
ATOM 2 P U A1040 131.050 -69.863 31.587 1.00 72.59 P
ATOM 3 OP1 U A1040 131.599 -68.693 32.341 1.00 63.00 O
ATOM 4 OP2 U A1040 131.520 -70.131 30.192 1.00 59.42 O
ATOM 5 O5' U A1040 131.218 -71.198 32.468 1.00 68.57 O
ATOM 6 C5' U A1040 131.808 -72.372 31.896 1.00 77.36 C
ATOM 7 C4' U A1040 131.607 -73.583 32.785 1.00 82.35 C
ATOM 8 O4' U A1040 132.586 -73.583 33.839 1.00 83.48 O
ATOM 9 C3' U A1040 130.271 -73.707 33.516 1.00 76.25 C
ATOM 10 O3' U A1040 129.184 -74.332 32.812 1.00 73.82 O
ATOM 11 C2' U A1040 130.619 -74.620 34.698 1.00 80.13 C
ATOM 12 O2' U A1040 130.383 -75.997 34.484 1.00 84.43 O
ATOM 13 C1' U A1040 132.126 -74.415 34.875 1.00 85.90 C
ATOM 14 N1 U A1040 132.487 -73.833 36.172 1.00 87.78 N
ATOM 15 C2 U A1040 133.365 -74.544 36.969 1.00 85.84 C
ATOM 16 O2 U A1040 133.889 -75.591 36.623 1.00 82.90 O
ATOM 17 N3 U A1040 133.608 -73.977 38.194 1.00 92.34 N
ATOM 18 C4 U A1040 133.078 -72.791 38.691 1.00101.24 C
ATOM 19 O4 U A1040 133.322 -72.454 39.858 1.00108.45 O
ATOM 20 C5 U A1040 132.205 -72.105 37.787 1.00 93.49 C
ATOM 21 C6 U A1040 131.948 -72.636 36.589 1.00 92.89 C
ATOM 22 P G A1041 129.152 -74.484 31.197 1.00 71.97 P
ATOM 23 OP1 G A1041 130.302 -73.930 30.446 1.00 69.75 O
ATOM 24 OP2 G A1041 127.775 -74.094 30.818 1.00 71.40 O
ATOM 25 O5' G A1041 129.202 -76.056 30.988 1.00 75.04 O
TER
ATOM 1 O3' U B1040 129.184 -74.332 32.812 1.00 73.82 O
ATOM 2 P G B1041 129.152 -74.484 31.197 1.00 71.97 P
ATOM 3 OP1 G B1041 130.302 -73.930 30.446 1.00 69.75 O
ATOM 4 OP2 G B1041 127.775 -74.094 30.818 1.00 71.40 O
ATOM 5 O5' G B1041 129.202 -76.056 30.988 1.00 75.04 O
ATOM 6 C5' G B1041 128.684 -76.896 31.996 1.00 67.88 C
ATOM 7 C4' G B1041 127.640 -77.803 31.437 1.00 61.86 C
ATOM 8 O4' G B1041 126.909 -77.163 30.357 1.00 60.66 O
ATOM 9 C3' G B1041 128.202 -79.062 30.820 1.00 70.04 C
ATOM 10 O3' G B1041 128.462 -79.977 31.881 1.00 83.07 O
ATOM 11 C2' G B1041 127.071 -79.479 29.885 1.00 62.54 C
ATOM 12 O2' G B1041 126.007 -80.083 30.591 1.00 53.41 O
ATOM 13 C1' G B1041 126.590 -78.124 29.360 1.00 60.85 C
ATOM 14 N9 G B1041 127.245 -77.733 28.108 1.00 60.75 N
ATOM 15 C8 G B1041 127.979 -76.588 27.887 1.00 63.04 C
ATOM 16 N7 G B1041 128.463 -76.514 26.676 1.00 61.33 N
ATOM 17 C5 G B1041 128.021 -77.676 26.046 1.00 53.80 C
ATOM 18 C6 G B1041 128.240 -78.151 24.708 1.00 53.66 C
ATOM 19 O6 G B1041 128.882 -77.618 23.789 1.00 50.30 O
ATOM 20 N1 G B1041 127.622 -79.376 24.490 1.00 53.43 N
ATOM 21 C2 G B1041 126.891 -80.062 25.421 1.00 55.13 C
ATOM 22 N2 G B1041 126.388 -81.231 25.008 1.00 48.94 N
ATOM 23 N3 G B1041 126.671 -79.634 26.666 1.00 56.68 N
ATOM 24 C4 G B1041 127.264 -78.441 26.910 1.00 55.08 C
ATOM 25 P U B1042 129.538 -81.158 31.690 1.00 71.95 P
ATOM 26 OP1 U B1042 129.573 -81.941 32.962 1.00 73.00 O
ATOM 27 OP2 U B1042 130.789 -80.594 31.120 1.00 67.40 O
ATOM 28 O5' U B1042 128.883 -82.048 30.555 1.00 67.09 O
TER
Atoms:
C4: (133.078,-72.791,38.691)
N3: (133.608,-73.977,38.194)
OP1: (131.599,-68.693,32.341)
OP2: (131.520,-70.131,30.192)
C2: (133.365,-74.544,36.969)
C1': (132.126,-74.415,34.875)
C3': (130.271,-73.707,33.516)
O5': (131.218,-71.198,32.468)
O4': (132.586,-73.583,33.839)
C5': (131.808,-72.372,31.896)
P: (131.050,-69.863,31.587)
C4': (131.607,-73.583,32.785)
C2': (130.619,-74.620,34.698)
O2': (130.383,-75.997,34.484)
N1: (132.487,-73.833,36.172)
O4: (133.322,-72.454,39.858)
O2: (133.889,-75.591,36.623)
C6: (131.948,-72.636,36.589)
C5: (132.205,-72.105,37.787)
O3': (129.184,-74.332,32.812)
N3: (133.608,-73.977,38.194)
OP1: (131.599,-68.693,32.341)
OP2: (131.520,-70.131,30.192)
C2: (133.365,-74.544,36.969)
C1': (132.126,-74.415,34.875)
C3': (130.271,-73.707,33.516)
O5': (131.218,-71.198,32.468)
O4': (132.586,-73.583,33.839)
C5': (131.808,-72.372,31.896)
P: (131.050,-69.863,31.587)
C4': (131.607,-73.583,32.785)
C2': (130.619,-74.620,34.698)
O2': (130.383,-75.997,34.484)
N1: (132.487,-73.833,36.172)
O4: (133.322,-72.454,39.858)
O2: (133.889,-75.591,36.623)
C6: (131.948,-72.636,36.589)
C5: (132.205,-72.105,37.787)
O3': (129.184,-74.332,32.812)
OP1: (130.302,-73.930,30.446)
OP2: (127.775,-74.094,30.818)
C3': (128.202,-79.062,30.820)
C1': (126.590,-78.124,29.360)
C5': (128.684,-76.896,31.996)
O6: (128.882,-77.618,23.789)
O4': (126.909,-77.163,30.357)
C8: (127.979,-76.588,27.887)
C2: (126.891,-80.062,25.421)
C6: (128.240,-78.151,24.708)
C5: (128.021,-77.676,26.046)
C4: (127.264,-78.441,26.910)
P: (129.152,-74.484,31.197)
C4': (127.640,-77.803,31.437)
C2': (127.071,-79.479,29.885)
O2': (126.007,-80.083,30.591)
N1: (127.622,-79.376,24.490)
N2: (126.388,-81.231,25.008)
N3: (126.671,-79.634,26.666)
N7: (128.463,-76.514,26.676)
N9: (127.245,-77.733,28.108)
O5': (129.202,-76.056,30.988)
O3': (128.462,-79.977,31.881)
OP2: (127.775,-74.094,30.818)
C3': (128.202,-79.062,30.820)
C1': (126.590,-78.124,29.360)
C5': (128.684,-76.896,31.996)
O6: (128.882,-77.618,23.789)
O4': (126.909,-77.163,30.357)
C8: (127.979,-76.588,27.887)
C2: (126.891,-80.062,25.421)
C6: (128.240,-78.151,24.708)
C5: (128.021,-77.676,26.046)
C4: (127.264,-78.441,26.910)
P: (129.152,-74.484,31.197)
C4': (127.640,-77.803,31.437)
C2': (127.071,-79.479,29.885)
O2': (126.007,-80.083,30.591)
N1: (127.622,-79.376,24.490)
N2: (126.388,-81.231,25.008)
N3: (126.671,-79.634,26.666)
N7: (128.463,-76.514,26.676)
N9: (127.245,-77.733,28.108)
O5': (129.202,-76.056,30.988)
O3': (128.462,-79.977,31.881)
Image (generated by PyMOL):