ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQM:0172:0174

Extra

PDB:
ATOM 1 O3' A A 171 70.483 126.406 25.285 1.00 38.73 O
ATOM 2 P G A 172 69.220 127.393 25.112 1.00 41.68 P
ATOM 3 OP1 G A 172 69.432 128.171 23.868 1.00 43.08 O
ATOM 4 OP2 G A 172 68.912 128.104 26.384 1.00 39.99 O
ATOM 5 O5' G A 172 67.971 126.441 24.866 1.00 42.29 O
ATOM 6 C5' G A 172 67.942 125.477 23.803 1.00 40.06 C
ATOM 7 C4' G A 172 66.758 124.563 24.001 1.00 42.00 C
ATOM 8 O4' G A 172 66.872 123.939 25.312 1.00 42.29 O
ATOM 9 C3' G A 172 65.402 125.258 24.046 1.00 41.51 C
ATOM 10 O3' G A 172 64.879 125.484 22.736 1.00 42.47 O
ATOM 11 C2' G A 172 64.561 124.273 24.850 1.00 42.49 C
ATOM 12 O2' G A 172 64.114 123.163 24.092 1.00 41.85 O
ATOM 13 C1' G A 172 65.581 123.776 25.877 1.00 43.31 C
ATOM 14 N9 G A 172 65.527 124.488 27.151 1.00 46.06 N
ATOM 15 C8 G A 172 66.201 125.634 27.495 1.00 46.21 C
ATOM 16 N7 G A 172 65.951 126.030 28.713 1.00 44.88 N
ATOM 17 C5 G A 172 65.061 125.088 29.207 1.00 46.04 C
ATOM 18 C6 G A 172 64.447 124.979 30.488 1.00 46.32 C
ATOM 19 O6 G A 172 64.573 125.720 31.476 1.00 45.15 O
ATOM 20 N1 G A 172 63.615 123.866 30.560 1.00 46.78 N
ATOM 21 C2 G A 172 63.403 122.972 29.541 1.00 45.57 C
ATOM 22 N2 G A 172 62.564 121.965 29.803 1.00 44.44 N
ATOM 23 N3 G A 172 63.971 123.060 28.350 1.00 47.09 N
ATOM 24 C4 G A 172 64.782 124.133 28.253 1.00 46.61 C
ATOM 25 P G A 173 63.828 126.669 22.482 1.00 47.87 P
ATOM 26 OP1 G A 173 64.066 127.155 21.105 1.00 50.35 O
ATOM 27 OP2 G A 173 63.891 127.621 23.616 1.00 51.33 O
ATOM 28 O5' G A 173 62.378 125.997 22.525 1.00 51.51 O
TER

ATOM 1 O3' G B 173 59.086 123.008 23.324 1.00 54.18 O
ATOM 2 P A B 174 58.628 122.048 22.121 1.00 52.41 P
ATOM 3 OP1 A B 174 59.695 122.059 21.080 1.00 52.99 O
ATOM 4 OP2 A B 174 57.236 122.395 21.754 1.00 56.49 O
ATOM 5 O5' A B 174 58.589 120.618 22.814 1.00 49.66 O
ATOM 6 C5' A B 174 59.800 119.953 23.157 1.00 44.34 C
ATOM 7 C4' A B 174 60.533 120.714 24.234 1.00 44.97 C
ATOM 8 O4' A B 174 59.832 120.654 25.511 1.00 45.25 O
ATOM 9 C3' A B 174 61.873 120.092 24.530 1.00 45.37 C
ATOM 10 O3' A B 174 62.786 120.478 23.531 1.00 46.13 O
ATOM 11 C2' A B 174 62.164 120.574 25.946 1.00 45.76 C
ATOM 12 O2' A B 174 62.615 121.911 26.036 1.00 43.65 O
ATOM 13 C1' A B 174 60.771 120.464 26.569 1.00 44.65 C
ATOM 14 N9 A B 174 60.560 119.128 27.131 1.00 45.83 N
ATOM 15 C8 A B 174 59.736 118.145 26.644 1.00 45.63 C
ATOM 16 N7 A B 174 59.784 117.030 27.326 1.00 44.86 N
ATOM 17 C5 A B 174 60.691 117.295 28.339 1.00 44.86 C
ATOM 18 C6 A B 174 61.177 116.509 29.399 1.00 46.94 C
ATOM 19 N6 A B 174 60.806 115.243 29.605 1.00 45.88 N
ATOM 20 N1 A B 174 62.070 117.074 30.245 1.00 45.35 N
ATOM 21 C2 A B 174 62.438 118.341 30.028 1.00 45.55 C
ATOM 22 N3 A B 174 62.054 119.178 29.065 1.00 46.13 N
ATOM 23 C4 A B 174 61.170 118.587 28.242 1.00 45.48 C
ATOM 24 P A B 175 63.995 119.506 23.156 1.00 46.74 P
ATOM 25 OP1 A B 175 64.662 120.022 21.931 1.00 47.77 O
ATOM 26 OP2 A B 175 63.513 118.110 23.183 1.00 49.78 O
ATOM 27 O5' A B 175 64.947 119.766 24.394 1.00 48.49 O
TER

Atoms:
OP1: (69.432,128.171,23.868)
OP2: (68.912,128.104,26.384)
C3': (65.402,125.258,24.046)
C1': (65.581,123.776,25.877)
C5': (67.942,125.477,23.803)
O6: (64.573,125.720,31.476)
O4': (66.872,123.939,25.312)
C8: (66.201,125.634,27.495)
C2: (63.403,122.972,29.541)
C6: (64.447,124.979,30.488)
C5: (65.061,125.088,29.207)
C4: (64.782,124.133,28.253)
P: (69.220,127.393,25.112)
C4': (66.758,124.563,24.001)
C2': (64.561,124.273,24.850)
O2': (64.114,123.163,24.092)
N1: (63.615,123.866,30.560)
N2: (62.564,121.965,29.803)
N3: (63.971,123.060,28.350)
N7: (65.951,126.030,28.713)
N9: (65.527,124.488,27.151)
O5': (67.971,126.441,24.866)
O3': (64.879,125.484,22.736)
OP1: (59.695,122.059,21.080)
OP2: (57.236,122.395,21.754)
C3': (61.873,120.092,24.530)
C1': (60.771,120.464,26.569)
C5': (59.800,119.953,23.157)
O4': (59.832,120.654,25.511)
C8: (59.736,118.145,26.644)
O2': (62.615,121.911,26.036)
C6: (61.177,116.509,29.399)
C5: (60.691,117.295,28.339)
C4: (61.170,118.587,28.242)
P: (58.628,122.048,22.121)
C4': (60.533,120.714,24.234)
C2': (62.164,120.574,25.946)
C2: (62.438,118.341,30.028)
N1: (62.070,117.074,30.245)
N3: (62.054,119.178,29.065)
N6: (60.806,115.243,29.605)
N7: (59.784,117.030,27.326)
N9: (60.560,119.128,27.131)
O5': (58.589,120.618,22.814)
O3': (62.786,120.478,23.531)
Image (generated by PyMOL):
PyMOL image
show in jmol