Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A1063:A1107
Extra
PDB:
ATOM 1 O3' G A1062 -121.998 44.951 -4.873 1.00 14.51 O
ATOM 2 P U A1063 -122.983 44.801 -3.611 1.00 46.41 P
ATOM 3 OP1 U A1063 -122.145 44.488 -2.423 1.00 46.41 O
ATOM 4 OP2 U A1063 -124.048 43.856 -4.009 1.00 46.41 O
ATOM 5 O5' U A1063 -123.594 46.255 -3.464 1.00 46.41 O
ATOM 6 C5' U A1063 -123.861 47.052 -4.608 1.00 46.41 C
ATOM 7 C4' U A1063 -122.705 47.964 -4.926 1.00 46.41 C
ATOM 8 O4' U A1063 -122.945 48.598 -6.212 1.00 46.41 O
ATOM 9 C3' U A1063 -122.464 49.097 -3.928 1.00 46.41 C
ATOM 10 O3' U A1063 -121.062 49.325 -3.799 1.00 46.41 O
ATOM 11 C2' U A1063 -123.111 50.295 -4.615 1.00 46.41 C
ATOM 12 O2' U A1063 -122.598 51.554 -4.221 1.00 46.41 O
ATOM 13 C1' U A1063 -122.810 49.993 -6.076 1.00 46.41 C
ATOM 14 N1 U A1063 -123.717 50.653 -7.033 1.00 46.36 N
ATOM 15 C2 U A1063 -123.146 51.738 -7.661 1.00 46.36 C
ATOM 16 O2 U A1063 -122.006 52.087 -7.423 1.00 46.36 O
ATOM 17 N3 U A1063 -123.943 52.398 -8.552 1.00 46.36 N
ATOM 18 C4 U A1063 -125.235 52.057 -8.861 1.00 46.36 C
ATOM 19 O4 U A1063 -125.801 52.758 -9.685 1.00 46.36 O
ATOM 20 C5 U A1063 -125.776 50.909 -8.175 1.00 46.36 C
ATOM 21 C6 U A1063 -125.009 50.255 -7.293 1.00 46.36 C
ATOM 22 P C A1064 -120.507 50.381 -2.713 1.00 31.54 P
ATOM 23 OP1 C A1064 -121.478 50.399 -1.589 1.00 31.54 O
ATOM 24 OP2 C A1064 -120.215 51.659 -3.445 1.00 31.54 O
ATOM 25 O5' C A1064 -119.149 49.708 -2.228 1.00 31.54 O
TER
ATOM 1 O3' G B1106 -120.961 55.029 -11.889 1.00 30.84 O
ATOM 2 P C B1107 -122.077 55.904 -11.127 1.00 24.43 P
ATOM 3 OP1 C B1107 -122.998 54.949 -10.442 1.00 24.43 O
ATOM 4 OP2 C B1107 -122.638 56.841 -12.119 1.00 24.43 O
ATOM 5 O5' C B1107 -121.228 56.703 -10.046 1.00 24.43 O
ATOM 6 C5' C B1107 -120.436 56.009 -9.104 1.00 24.43 C
ATOM 7 C4' C B1107 -119.807 56.947 -8.112 1.00 24.43 C
ATOM 8 O4' C B1107 -118.752 57.707 -8.751 1.00 24.43 O
ATOM 9 C3' C B1107 -120.719 58.011 -7.532 1.00 24.43 C
ATOM 10 O3' C B1107 -121.560 57.525 -6.499 1.00 24.43 O
ATOM 11 C2' C B1107 -119.730 59.068 -7.069 1.00 24.43 C
ATOM 12 O2' C B1107 -119.126 58.681 -5.846 1.00 24.43 O
ATOM 13 C1' C B1107 -118.677 58.995 -8.172 1.00 24.43 C
ATOM 14 N1 C B1107 -118.878 60.016 -9.241 1.00 24.10 N
ATOM 15 C2 C B1107 -118.781 61.408 -8.970 1.00 24.10 C
ATOM 16 O2 C B1107 -118.591 61.833 -7.812 1.00 24.10 O
ATOM 17 N3 C B1107 -118.924 62.280 -10.005 1.00 24.10 N
ATOM 18 C4 C B1107 -119.132 61.818 -11.246 1.00 24.10 C
ATOM 19 N4 C B1107 -119.273 62.691 -12.239 1.00 24.10 N
ATOM 20 C5 C B1107 -119.210 60.430 -11.542 1.00 24.10 C
ATOM 21 C6 C B1107 -119.074 59.574 -10.528 1.00 24.10 C
ATOM 22 P A B1108 -123.144 57.733 -6.613 1.00 29.14 P
ATOM 23 OP1 A B1108 -123.771 56.952 -5.519 1.00 29.14 O
ATOM 24 OP2 A B1108 -123.511 57.431 -8.019 1.00 29.14 O
ATOM 25 O5' A B1108 -123.316 59.292 -6.336 1.00 29.14 O
TER
ATOM 2 P U A1063 -122.983 44.801 -3.611 1.00 46.41 P
ATOM 3 OP1 U A1063 -122.145 44.488 -2.423 1.00 46.41 O
ATOM 4 OP2 U A1063 -124.048 43.856 -4.009 1.00 46.41 O
ATOM 5 O5' U A1063 -123.594 46.255 -3.464 1.00 46.41 O
ATOM 6 C5' U A1063 -123.861 47.052 -4.608 1.00 46.41 C
ATOM 7 C4' U A1063 -122.705 47.964 -4.926 1.00 46.41 C
ATOM 8 O4' U A1063 -122.945 48.598 -6.212 1.00 46.41 O
ATOM 9 C3' U A1063 -122.464 49.097 -3.928 1.00 46.41 C
ATOM 10 O3' U A1063 -121.062 49.325 -3.799 1.00 46.41 O
ATOM 11 C2' U A1063 -123.111 50.295 -4.615 1.00 46.41 C
ATOM 12 O2' U A1063 -122.598 51.554 -4.221 1.00 46.41 O
ATOM 13 C1' U A1063 -122.810 49.993 -6.076 1.00 46.41 C
ATOM 14 N1 U A1063 -123.717 50.653 -7.033 1.00 46.36 N
ATOM 15 C2 U A1063 -123.146 51.738 -7.661 1.00 46.36 C
ATOM 16 O2 U A1063 -122.006 52.087 -7.423 1.00 46.36 O
ATOM 17 N3 U A1063 -123.943 52.398 -8.552 1.00 46.36 N
ATOM 18 C4 U A1063 -125.235 52.057 -8.861 1.00 46.36 C
ATOM 19 O4 U A1063 -125.801 52.758 -9.685 1.00 46.36 O
ATOM 20 C5 U A1063 -125.776 50.909 -8.175 1.00 46.36 C
ATOM 21 C6 U A1063 -125.009 50.255 -7.293 1.00 46.36 C
ATOM 22 P C A1064 -120.507 50.381 -2.713 1.00 31.54 P
ATOM 23 OP1 C A1064 -121.478 50.399 -1.589 1.00 31.54 O
ATOM 24 OP2 C A1064 -120.215 51.659 -3.445 1.00 31.54 O
ATOM 25 O5' C A1064 -119.149 49.708 -2.228 1.00 31.54 O
TER
ATOM 1 O3' G B1106 -120.961 55.029 -11.889 1.00 30.84 O
ATOM 2 P C B1107 -122.077 55.904 -11.127 1.00 24.43 P
ATOM 3 OP1 C B1107 -122.998 54.949 -10.442 1.00 24.43 O
ATOM 4 OP2 C B1107 -122.638 56.841 -12.119 1.00 24.43 O
ATOM 5 O5' C B1107 -121.228 56.703 -10.046 1.00 24.43 O
ATOM 6 C5' C B1107 -120.436 56.009 -9.104 1.00 24.43 C
ATOM 7 C4' C B1107 -119.807 56.947 -8.112 1.00 24.43 C
ATOM 8 O4' C B1107 -118.752 57.707 -8.751 1.00 24.43 O
ATOM 9 C3' C B1107 -120.719 58.011 -7.532 1.00 24.43 C
ATOM 10 O3' C B1107 -121.560 57.525 -6.499 1.00 24.43 O
ATOM 11 C2' C B1107 -119.730 59.068 -7.069 1.00 24.43 C
ATOM 12 O2' C B1107 -119.126 58.681 -5.846 1.00 24.43 O
ATOM 13 C1' C B1107 -118.677 58.995 -8.172 1.00 24.43 C
ATOM 14 N1 C B1107 -118.878 60.016 -9.241 1.00 24.10 N
ATOM 15 C2 C B1107 -118.781 61.408 -8.970 1.00 24.10 C
ATOM 16 O2 C B1107 -118.591 61.833 -7.812 1.00 24.10 O
ATOM 17 N3 C B1107 -118.924 62.280 -10.005 1.00 24.10 N
ATOM 18 C4 C B1107 -119.132 61.818 -11.246 1.00 24.10 C
ATOM 19 N4 C B1107 -119.273 62.691 -12.239 1.00 24.10 N
ATOM 20 C5 C B1107 -119.210 60.430 -11.542 1.00 24.10 C
ATOM 21 C6 C B1107 -119.074 59.574 -10.528 1.00 24.10 C
ATOM 22 P A B1108 -123.144 57.733 -6.613 1.00 29.14 P
ATOM 23 OP1 A B1108 -123.771 56.952 -5.519 1.00 29.14 O
ATOM 24 OP2 A B1108 -123.511 57.431 -8.019 1.00 29.14 O
ATOM 25 O5' A B1108 -123.316 59.292 -6.336 1.00 29.14 O
TER
Atoms:
C4: (-125.235,52.057,-8.861)
N3: (-123.943,52.398,-8.552)
OP1: (-122.145,44.488,-2.423)
OP2: (-124.048,43.856,-4.009)
C2: (-123.146,51.738,-7.661)
C1': (-122.810,49.993,-6.076)
C3': (-122.464,49.097,-3.928)
O5': (-123.594,46.255,-3.464)
O4': (-122.945,48.598,-6.212)
C5': (-123.861,47.052,-4.608)
P: (-122.983,44.801,-3.611)
C4': (-122.705,47.964,-4.926)
C2': (-123.111,50.295,-4.615)
O2': (-122.598,51.554,-4.221)
N1: (-123.717,50.653,-7.033)
O4: (-125.801,52.758,-9.685)
O2: (-122.006,52.087,-7.423)
C6: (-125.009,50.255,-7.293)
C5: (-125.776,50.909,-8.175)
O3': (-121.062,49.325,-3.799)
N3: (-123.943,52.398,-8.552)
OP1: (-122.145,44.488,-2.423)
OP2: (-124.048,43.856,-4.009)
C2: (-123.146,51.738,-7.661)
C1': (-122.810,49.993,-6.076)
C3': (-122.464,49.097,-3.928)
O5': (-123.594,46.255,-3.464)
O4': (-122.945,48.598,-6.212)
C5': (-123.861,47.052,-4.608)
P: (-122.983,44.801,-3.611)
C4': (-122.705,47.964,-4.926)
C2': (-123.111,50.295,-4.615)
O2': (-122.598,51.554,-4.221)
N1: (-123.717,50.653,-7.033)
O4: (-125.801,52.758,-9.685)
O2: (-122.006,52.087,-7.423)
C6: (-125.009,50.255,-7.293)
C5: (-125.776,50.909,-8.175)
O3': (-121.062,49.325,-3.799)
C2: (-118.781,61.408,-8.970)
OP1: (-122.998,54.949,-10.442)
OP2: (-122.638,56.841,-12.119)
C4: (-119.132,61.818,-11.246)
O5': (-121.228,56.703,-10.046)
C3': (-120.719,58.011,-7.532)
C1': (-118.677,58.995,-8.172)
O4': (-118.752,57.707,-8.751)
C5': (-120.436,56.009,-9.104)
P: (-122.077,55.904,-11.127)
O2: (-118.591,61.833,-7.812)
C4': (-119.807,56.947,-8.112)
C2': (-119.730,59.068,-7.069)
O2': (-119.126,58.681,-5.846)
N1: (-118.878,60.016,-9.241)
N3: (-118.924,62.280,-10.005)
N4: (-119.273,62.691,-12.239)
C6: (-119.074,59.574,-10.528)
C5: (-119.210,60.430,-11.542)
O3': (-121.560,57.525,-6.499)
OP1: (-122.998,54.949,-10.442)
OP2: (-122.638,56.841,-12.119)
C4: (-119.132,61.818,-11.246)
O5': (-121.228,56.703,-10.046)
C3': (-120.719,58.011,-7.532)
C1': (-118.677,58.995,-8.172)
O4': (-118.752,57.707,-8.751)
C5': (-120.436,56.009,-9.104)
P: (-122.077,55.904,-11.127)
O2: (-118.591,61.833,-7.812)
C4': (-119.807,56.947,-8.112)
C2': (-119.730,59.068,-7.069)
O2': (-119.126,58.681,-5.846)
N1: (-118.878,60.016,-9.241)
N3: (-118.924,62.280,-10.005)
N4: (-119.273,62.691,-12.239)
C6: (-119.074,59.574,-10.528)
C5: (-119.210,60.430,-11.542)
O3': (-121.560,57.525,-6.499)
Image (generated by PyMOL):