Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02399:02638
Extra
PDB:
ATOM 1 O3' U A2398 64.517 129.786 147.641 1.00 53.71 O
ATOM 2 P G A2399 64.129 128.862 148.905 1.00 53.52 P
ATOM 3 OP1 G A2399 64.331 129.667 150.135 1.00 52.95 O
ATOM 4 OP2 G A2399 64.828 127.553 148.757 1.00 52.92 O
ATOM 5 O5' G A2399 62.568 128.608 148.745 1.00 50.22 O
ATOM 6 C5' G A2399 61.630 129.686 148.856 1.00 47.39 C
ATOM 7 C4' G A2399 60.226 129.143 148.862 1.00 46.48 C
ATOM 8 O4' G A2399 59.932 128.550 147.572 1.00 46.08 O
ATOM 9 C3' G A2399 60.007 128.003 149.833 1.00 47.97 C
ATOM 10 O3' G A2399 59.788 128.463 151.152 1.00 51.59 O
ATOM 11 C2' G A2399 58.804 127.303 149.231 1.00 46.82 C
ATOM 12 O2' G A2399 57.608 128.015 149.487 1.00 48.08 O
ATOM 13 C1' G A2399 59.147 127.380 147.744 1.00 44.76 C
ATOM 14 N9 G A2399 59.925 126.236 147.267 1.00 42.62 N
ATOM 15 C8 G A2399 61.297 126.135 147.202 1.00 42.66 C
ATOM 16 N7 G A2399 61.707 124.993 146.725 1.00 40.48 N
ATOM 17 C5 G A2399 60.538 124.295 146.460 1.00 41.17 C
ATOM 18 C6 G A2399 60.345 122.994 145.924 1.00 41.04 C
ATOM 19 O6 G A2399 61.196 122.167 145.572 1.00 41.69 O
ATOM 20 N1 G A2399 58.998 122.685 145.812 1.00 40.25 N
ATOM 21 C2 G A2399 57.969 123.513 146.170 1.00 41.22 C
ATOM 22 N2 G A2399 56.734 123.032 145.971 1.00 42.63 N
ATOM 23 N3 G A2399 58.132 124.721 146.679 1.00 40.32 N
ATOM 24 C4 G A2399 59.431 125.047 146.793 1.00 40.90 C
ATOM 25 P C A2400 60.223 127.542 152.394 1.00 52.98 P
ATOM 26 OP1 C A2400 59.938 128.351 153.605 1.00 53.57 O
ATOM 27 OP2 C A2400 61.594 127.014 152.165 1.00 51.79 O
ATOM 28 O5' C A2400 59.217 126.311 152.316 1.00 52.23 O
TER
ATOM 1 O3' G B2637 52.447 125.460 154.468 1.00 51.78 O
ATOM 2 P A B2638 52.277 126.640 153.400 1.00 54.59 P
ATOM 3 OP1 A B2638 53.178 127.761 153.770 1.00 52.13 O
ATOM 4 OP2 A B2638 50.821 126.899 153.189 1.00 53.88 O
ATOM 5 O5' A B2638 52.873 126.003 152.074 1.00 56.24 O
ATOM 6 C5' A B2638 52.982 126.785 150.888 1.00 57.20 C
ATOM 7 C4' A B2638 54.145 126.315 150.059 1.00 57.41 C
ATOM 8 O4' A B2638 54.015 124.897 149.785 1.00 57.01 O
ATOM 9 C3' A B2638 54.180 126.979 148.698 1.00 57.19 C
ATOM 10 O3' A B2638 54.867 128.217 148.775 1.00 56.50 O
ATOM 11 C2' A B2638 54.887 125.943 147.844 1.00 57.05 C
ATOM 12 O2' A B2638 56.284 125.961 148.044 1.00 58.38 O
ATOM 13 C1' A B2638 54.308 124.650 148.422 1.00 56.11 C
ATOM 14 N9 A B2638 53.069 124.207 147.784 1.00 54.65 N
ATOM 15 C8 A B2638 51.813 124.198 148.338 1.00 53.71 C
ATOM 16 N7 A B2638 50.899 123.675 147.564 1.00 54.04 N
ATOM 17 C5 A B2638 51.592 123.333 146.414 1.00 54.27 C
ATOM 18 C6 A B2638 51.189 122.725 145.219 1.00 54.52 C
ATOM 19 N6 A B2638 49.941 122.310 144.989 1.00 53.75 N
ATOM 20 N1 A B2638 52.123 122.545 144.260 1.00 55.48 N
ATOM 21 C2 A B2638 53.377 122.940 144.506 1.00 55.27 C
ATOM 22 N3 A B2638 53.881 123.508 145.596 1.00 54.58 N
ATOM 23 C4 A B2638 52.926 123.678 146.525 1.00 54.44 C
ATOM 24 P A B2639 54.056 129.552 149.150 1.00 56.18 P
ATOM 25 OP1 A B2639 54.611 130.045 150.436 1.00 54.77 O
ATOM 26 OP2 A B2639 52.592 129.285 149.030 1.00 54.88 O
ATOM 27 O5' A B2639 54.466 130.567 147.997 1.00 55.29 O
TER
ATOM 2 P G A2399 64.129 128.862 148.905 1.00 53.52 P
ATOM 3 OP1 G A2399 64.331 129.667 150.135 1.00 52.95 O
ATOM 4 OP2 G A2399 64.828 127.553 148.757 1.00 52.92 O
ATOM 5 O5' G A2399 62.568 128.608 148.745 1.00 50.22 O
ATOM 6 C5' G A2399 61.630 129.686 148.856 1.00 47.39 C
ATOM 7 C4' G A2399 60.226 129.143 148.862 1.00 46.48 C
ATOM 8 O4' G A2399 59.932 128.550 147.572 1.00 46.08 O
ATOM 9 C3' G A2399 60.007 128.003 149.833 1.00 47.97 C
ATOM 10 O3' G A2399 59.788 128.463 151.152 1.00 51.59 O
ATOM 11 C2' G A2399 58.804 127.303 149.231 1.00 46.82 C
ATOM 12 O2' G A2399 57.608 128.015 149.487 1.00 48.08 O
ATOM 13 C1' G A2399 59.147 127.380 147.744 1.00 44.76 C
ATOM 14 N9 G A2399 59.925 126.236 147.267 1.00 42.62 N
ATOM 15 C8 G A2399 61.297 126.135 147.202 1.00 42.66 C
ATOM 16 N7 G A2399 61.707 124.993 146.725 1.00 40.48 N
ATOM 17 C5 G A2399 60.538 124.295 146.460 1.00 41.17 C
ATOM 18 C6 G A2399 60.345 122.994 145.924 1.00 41.04 C
ATOM 19 O6 G A2399 61.196 122.167 145.572 1.00 41.69 O
ATOM 20 N1 G A2399 58.998 122.685 145.812 1.00 40.25 N
ATOM 21 C2 G A2399 57.969 123.513 146.170 1.00 41.22 C
ATOM 22 N2 G A2399 56.734 123.032 145.971 1.00 42.63 N
ATOM 23 N3 G A2399 58.132 124.721 146.679 1.00 40.32 N
ATOM 24 C4 G A2399 59.431 125.047 146.793 1.00 40.90 C
ATOM 25 P C A2400 60.223 127.542 152.394 1.00 52.98 P
ATOM 26 OP1 C A2400 59.938 128.351 153.605 1.00 53.57 O
ATOM 27 OP2 C A2400 61.594 127.014 152.165 1.00 51.79 O
ATOM 28 O5' C A2400 59.217 126.311 152.316 1.00 52.23 O
TER
ATOM 1 O3' G B2637 52.447 125.460 154.468 1.00 51.78 O
ATOM 2 P A B2638 52.277 126.640 153.400 1.00 54.59 P
ATOM 3 OP1 A B2638 53.178 127.761 153.770 1.00 52.13 O
ATOM 4 OP2 A B2638 50.821 126.899 153.189 1.00 53.88 O
ATOM 5 O5' A B2638 52.873 126.003 152.074 1.00 56.24 O
ATOM 6 C5' A B2638 52.982 126.785 150.888 1.00 57.20 C
ATOM 7 C4' A B2638 54.145 126.315 150.059 1.00 57.41 C
ATOM 8 O4' A B2638 54.015 124.897 149.785 1.00 57.01 O
ATOM 9 C3' A B2638 54.180 126.979 148.698 1.00 57.19 C
ATOM 10 O3' A B2638 54.867 128.217 148.775 1.00 56.50 O
ATOM 11 C2' A B2638 54.887 125.943 147.844 1.00 57.05 C
ATOM 12 O2' A B2638 56.284 125.961 148.044 1.00 58.38 O
ATOM 13 C1' A B2638 54.308 124.650 148.422 1.00 56.11 C
ATOM 14 N9 A B2638 53.069 124.207 147.784 1.00 54.65 N
ATOM 15 C8 A B2638 51.813 124.198 148.338 1.00 53.71 C
ATOM 16 N7 A B2638 50.899 123.675 147.564 1.00 54.04 N
ATOM 17 C5 A B2638 51.592 123.333 146.414 1.00 54.27 C
ATOM 18 C6 A B2638 51.189 122.725 145.219 1.00 54.52 C
ATOM 19 N6 A B2638 49.941 122.310 144.989 1.00 53.75 N
ATOM 20 N1 A B2638 52.123 122.545 144.260 1.00 55.48 N
ATOM 21 C2 A B2638 53.377 122.940 144.506 1.00 55.27 C
ATOM 22 N3 A B2638 53.881 123.508 145.596 1.00 54.58 N
ATOM 23 C4 A B2638 52.926 123.678 146.525 1.00 54.44 C
ATOM 24 P A B2639 54.056 129.552 149.150 1.00 56.18 P
ATOM 25 OP1 A B2639 54.611 130.045 150.436 1.00 54.77 O
ATOM 26 OP2 A B2639 52.592 129.285 149.030 1.00 54.88 O
ATOM 27 O5' A B2639 54.466 130.567 147.997 1.00 55.29 O
TER
Atoms:
OP1: (64.331,129.667,150.135)
OP2: (64.828,127.553,148.757)
C3': (60.007,128.003,149.833)
C1': (59.147,127.380,147.744)
C5': (61.630,129.686,148.856)
O6: (61.196,122.167,145.572)
O4': (59.932,128.550,147.572)
C8: (61.297,126.135,147.202)
C2: (57.969,123.513,146.170)
C6: (60.345,122.994,145.924)
C5: (60.538,124.295,146.460)
C4: (59.431,125.047,146.793)
P: (64.129,128.862,148.905)
C4': (60.226,129.143,148.862)
C2': (58.804,127.303,149.231)
O2': (57.608,128.015,149.487)
N1: (58.998,122.685,145.812)
N2: (56.734,123.032,145.971)
N3: (58.132,124.721,146.679)
N7: (61.707,124.993,146.725)
N9: (59.925,126.236,147.267)
O5': (62.568,128.608,148.745)
O3': (59.788,128.463,151.152)
OP2: (64.828,127.553,148.757)
C3': (60.007,128.003,149.833)
C1': (59.147,127.380,147.744)
C5': (61.630,129.686,148.856)
O6: (61.196,122.167,145.572)
O4': (59.932,128.550,147.572)
C8: (61.297,126.135,147.202)
C2: (57.969,123.513,146.170)
C6: (60.345,122.994,145.924)
C5: (60.538,124.295,146.460)
C4: (59.431,125.047,146.793)
P: (64.129,128.862,148.905)
C4': (60.226,129.143,148.862)
C2': (58.804,127.303,149.231)
O2': (57.608,128.015,149.487)
N1: (58.998,122.685,145.812)
N2: (56.734,123.032,145.971)
N3: (58.132,124.721,146.679)
N7: (61.707,124.993,146.725)
N9: (59.925,126.236,147.267)
O5': (62.568,128.608,148.745)
O3': (59.788,128.463,151.152)
OP1: (53.178,127.761,153.770)
OP2: (50.821,126.899,153.189)
C3': (54.180,126.979,148.698)
C1': (54.308,124.650,148.422)
C5': (52.982,126.785,150.888)
O4': (54.015,124.897,149.785)
C8: (51.813,124.198,148.338)
O2': (56.284,125.961,148.044)
C6: (51.189,122.725,145.219)
C5: (51.592,123.333,146.414)
C4: (52.926,123.678,146.525)
P: (52.277,126.640,153.400)
C4': (54.145,126.315,150.059)
C2': (54.887,125.943,147.844)
C2: (53.377,122.940,144.506)
N1: (52.123,122.545,144.260)
N3: (53.881,123.508,145.596)
N6: (49.941,122.310,144.989)
N7: (50.899,123.675,147.564)
N9: (53.069,124.207,147.784)
O5': (52.873,126.003,152.074)
O3': (54.867,128.217,148.775)
OP2: (50.821,126.899,153.189)
C3': (54.180,126.979,148.698)
C1': (54.308,124.650,148.422)
C5': (52.982,126.785,150.888)
O4': (54.015,124.897,149.785)
C8: (51.813,124.198,148.338)
O2': (56.284,125.961,148.044)
C6: (51.189,122.725,145.219)
C5: (51.592,123.333,146.414)
C4: (52.926,123.678,146.525)
P: (52.277,126.640,153.400)
C4': (54.145,126.315,150.059)
C2': (54.887,125.943,147.844)
C2: (53.377,122.940,144.506)
N1: (52.123,122.545,144.260)
N3: (53.881,123.508,145.596)
N6: (49.941,122.310,144.989)
N7: (50.899,123.675,147.564)
N9: (53.069,124.207,147.784)
O5': (52.873,126.003,152.074)
O3': (54.867,128.217,148.775)
Image (generated by PyMOL):