Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A681:A465
Extra
PDB:
ATOM 1 O3' G A 680 -55.103 -46.696 45.778 1.00 0.01 O
ATOM 2 P G A 681 -53.986 -45.792 45.099 1.00 0.01 P
ATOM 3 OP1 G A 681 -53.703 -44.697 46.009 1.00 0.01 O
ATOM 4 OP2 G A 681 -54.437 -45.472 43.748 1.00 0.01 O
ATOM 5 O5' G A 681 -52.751 -46.765 45.045 1.00 0.01 O
ATOM 6 C5' G A 681 -51.775 -46.626 44.036 1.00 0.01 C
ATOM 7 C4' G A 681 -51.489 -47.945 43.380 1.00 0.01 C
ATOM 8 O4' G A 681 -52.716 -48.502 42.879 1.00 0.01 O
ATOM 9 C3' G A 681 -50.569 -47.914 42.168 1.00 0.01 C
ATOM 10 O3' G A 681 -49.204 -47.912 42.517 1.00 0.01 O
ATOM 11 C2' G A 681 -50.960 -49.163 41.438 1.00 0.01 C
ATOM 12 O2' G A 681 -50.339 -50.278 42.058 1.00 0.01 O
ATOM 13 C1' G A 681 -52.455 -49.232 41.714 1.00 0.01 C
ATOM 14 N9 G A 681 -53.279 -48.687 40.625 1.00 0.01 N
ATOM 15 C8 G A 681 -54.385 -47.924 40.858 1.00 0.01 C
ATOM 16 N7 G A 681 -55.037 -47.604 39.782 1.00 0.01 N
ATOM 17 C5 G A 681 -54.332 -48.207 38.776 1.00 0.01 C
ATOM 18 C6 G A 681 -54.599 -48.193 37.409 1.00 0.01 C
ATOM 19 O6 G A 681 -55.508 -47.624 36.828 1.00 0.01 O
ATOM 20 N1 G A 681 -53.670 -48.928 36.715 1.00 0.01 N
ATOM 21 C2 G A 681 -52.622 -49.590 37.286 1.00 0.01 C
ATOM 22 N2 G A 681 -51.826 -50.238 36.426 1.00 0.01 N
ATOM 23 N3 G A 681 -52.365 -49.624 38.590 1.00 0.01 N
ATOM 24 C4 G A 681 -53.256 -48.901 39.273 1.00 0.01 C
ATOM 25 P U A 682 -48.170 -47.092 41.630 1.00 0.01 P
ATOM 26 OP1 U A 682 -46.871 -47.201 42.276 1.00 0.01 O
ATOM 27 OP2 U A 682 -48.750 -45.751 41.418 1.00 0.01 O
ATOM 28 O5' U A 682 -48.160 -47.881 40.269 1.00 0.01 O
TER
ATOM 1 O3' G B 464 -42.703 -53.508 36.764 1.00 0.01 O
ATOM 2 P A B 465 -43.192 -54.884 37.375 1.00 0.01 P
ATOM 3 OP1 A B 465 -42.381 -55.145 38.559 1.00 0.01 O
ATOM 4 OP2 A B 465 -43.180 -55.853 36.300 1.00 0.01 O
ATOM 5 O5' A B 465 -44.666 -54.556 37.802 1.00 0.01 O
ATOM 6 C5' A B 465 -44.911 -53.765 38.936 1.00 0.01 C
ATOM 7 C4' A B 465 -46.346 -53.372 39.018 1.00 0.01 C
ATOM 8 O4' A B 465 -46.724 -52.704 37.809 1.00 0.01 O
ATOM 9 C3' A B 465 -47.333 -54.501 39.103 1.00 0.01 C
ATOM 10 O3' A B 465 -47.418 -55.059 40.397 1.00 0.01 O
ATOM 11 C2' A B 465 -48.620 -53.837 38.614 1.00 0.01 C
ATOM 12 O2' A B 465 -49.216 -53.028 39.616 1.00 0.01 O
ATOM 13 C1' A B 465 -48.083 -52.920 37.542 1.00 0.01 C
ATOM 14 N9 A B 465 -48.195 -53.497 36.219 1.00 0.01 N
ATOM 15 C8 A B 465 -47.521 -54.556 35.741 1.00 0.01 C
ATOM 16 N7 A B 465 -47.805 -54.811 34.492 1.00 0.01 N
ATOM 17 C5 A B 465 -48.712 -53.852 34.136 1.00 0.01 C
ATOM 18 C6 A B 465 -49.379 -53.592 32.943 1.00 0.01 C
ATOM 19 N6 A B 465 -49.229 -54.327 31.860 1.00 0.01 N
ATOM 20 N1 A B 465 -50.216 -52.540 32.907 1.00 0.01 N
ATOM 21 C2 A B 465 -50.371 -51.814 34.018 1.00 0.01 C
ATOM 22 N3 A B 465 -49.794 -51.965 35.212 1.00 0.01 N
ATOM 23 C4 A B 465 -48.962 -53.022 35.202 1.00 0.01 C
ATOM 24 P G B 466 -46.939 -56.548 40.662 1.00 0.01 P
ATOM 25 OP1 G B 466 -47.262 -56.852 42.030 1.00 0.01 O
ATOM 26 OP2 G B 466 -45.562 -56.647 40.231 1.00 0.01 O
ATOM 27 O5' G B 466 -47.835 -57.395 39.709 1.00 0.01 O
TER
ATOM 2 P G A 681 -53.986 -45.792 45.099 1.00 0.01 P
ATOM 3 OP1 G A 681 -53.703 -44.697 46.009 1.00 0.01 O
ATOM 4 OP2 G A 681 -54.437 -45.472 43.748 1.00 0.01 O
ATOM 5 O5' G A 681 -52.751 -46.765 45.045 1.00 0.01 O
ATOM 6 C5' G A 681 -51.775 -46.626 44.036 1.00 0.01 C
ATOM 7 C4' G A 681 -51.489 -47.945 43.380 1.00 0.01 C
ATOM 8 O4' G A 681 -52.716 -48.502 42.879 1.00 0.01 O
ATOM 9 C3' G A 681 -50.569 -47.914 42.168 1.00 0.01 C
ATOM 10 O3' G A 681 -49.204 -47.912 42.517 1.00 0.01 O
ATOM 11 C2' G A 681 -50.960 -49.163 41.438 1.00 0.01 C
ATOM 12 O2' G A 681 -50.339 -50.278 42.058 1.00 0.01 O
ATOM 13 C1' G A 681 -52.455 -49.232 41.714 1.00 0.01 C
ATOM 14 N9 G A 681 -53.279 -48.687 40.625 1.00 0.01 N
ATOM 15 C8 G A 681 -54.385 -47.924 40.858 1.00 0.01 C
ATOM 16 N7 G A 681 -55.037 -47.604 39.782 1.00 0.01 N
ATOM 17 C5 G A 681 -54.332 -48.207 38.776 1.00 0.01 C
ATOM 18 C6 G A 681 -54.599 -48.193 37.409 1.00 0.01 C
ATOM 19 O6 G A 681 -55.508 -47.624 36.828 1.00 0.01 O
ATOM 20 N1 G A 681 -53.670 -48.928 36.715 1.00 0.01 N
ATOM 21 C2 G A 681 -52.622 -49.590 37.286 1.00 0.01 C
ATOM 22 N2 G A 681 -51.826 -50.238 36.426 1.00 0.01 N
ATOM 23 N3 G A 681 -52.365 -49.624 38.590 1.00 0.01 N
ATOM 24 C4 G A 681 -53.256 -48.901 39.273 1.00 0.01 C
ATOM 25 P U A 682 -48.170 -47.092 41.630 1.00 0.01 P
ATOM 26 OP1 U A 682 -46.871 -47.201 42.276 1.00 0.01 O
ATOM 27 OP2 U A 682 -48.750 -45.751 41.418 1.00 0.01 O
ATOM 28 O5' U A 682 -48.160 -47.881 40.269 1.00 0.01 O
TER
ATOM 1 O3' G B 464 -42.703 -53.508 36.764 1.00 0.01 O
ATOM 2 P A B 465 -43.192 -54.884 37.375 1.00 0.01 P
ATOM 3 OP1 A B 465 -42.381 -55.145 38.559 1.00 0.01 O
ATOM 4 OP2 A B 465 -43.180 -55.853 36.300 1.00 0.01 O
ATOM 5 O5' A B 465 -44.666 -54.556 37.802 1.00 0.01 O
ATOM 6 C5' A B 465 -44.911 -53.765 38.936 1.00 0.01 C
ATOM 7 C4' A B 465 -46.346 -53.372 39.018 1.00 0.01 C
ATOM 8 O4' A B 465 -46.724 -52.704 37.809 1.00 0.01 O
ATOM 9 C3' A B 465 -47.333 -54.501 39.103 1.00 0.01 C
ATOM 10 O3' A B 465 -47.418 -55.059 40.397 1.00 0.01 O
ATOM 11 C2' A B 465 -48.620 -53.837 38.614 1.00 0.01 C
ATOM 12 O2' A B 465 -49.216 -53.028 39.616 1.00 0.01 O
ATOM 13 C1' A B 465 -48.083 -52.920 37.542 1.00 0.01 C
ATOM 14 N9 A B 465 -48.195 -53.497 36.219 1.00 0.01 N
ATOM 15 C8 A B 465 -47.521 -54.556 35.741 1.00 0.01 C
ATOM 16 N7 A B 465 -47.805 -54.811 34.492 1.00 0.01 N
ATOM 17 C5 A B 465 -48.712 -53.852 34.136 1.00 0.01 C
ATOM 18 C6 A B 465 -49.379 -53.592 32.943 1.00 0.01 C
ATOM 19 N6 A B 465 -49.229 -54.327 31.860 1.00 0.01 N
ATOM 20 N1 A B 465 -50.216 -52.540 32.907 1.00 0.01 N
ATOM 21 C2 A B 465 -50.371 -51.814 34.018 1.00 0.01 C
ATOM 22 N3 A B 465 -49.794 -51.965 35.212 1.00 0.01 N
ATOM 23 C4 A B 465 -48.962 -53.022 35.202 1.00 0.01 C
ATOM 24 P G B 466 -46.939 -56.548 40.662 1.00 0.01 P
ATOM 25 OP1 G B 466 -47.262 -56.852 42.030 1.00 0.01 O
ATOM 26 OP2 G B 466 -45.562 -56.647 40.231 1.00 0.01 O
ATOM 27 O5' G B 466 -47.835 -57.395 39.709 1.00 0.01 O
TER
Atoms:
OP1: (-53.703,-44.697,46.009)
OP2: (-54.437,-45.472,43.748)
C3': (-50.569,-47.914,42.168)
C1': (-52.455,-49.232,41.714)
C5': (-51.775,-46.626,44.036)
O6: (-55.508,-47.624,36.828)
O4': (-52.716,-48.502,42.879)
C8: (-54.385,-47.924,40.858)
C2: (-52.622,-49.590,37.286)
C6: (-54.599,-48.193,37.409)
C5: (-54.332,-48.207,38.776)
C4: (-53.256,-48.901,39.273)
P: (-53.986,-45.792,45.099)
C4': (-51.489,-47.945,43.380)
C2': (-50.960,-49.163,41.438)
O2': (-50.339,-50.278,42.058)
N1: (-53.670,-48.928,36.715)
N2: (-51.826,-50.238,36.426)
N3: (-52.365,-49.624,38.590)
N7: (-55.037,-47.604,39.782)
N9: (-53.279,-48.687,40.625)
O5': (-52.751,-46.765,45.045)
O3': (-49.204,-47.912,42.517)
OP2: (-54.437,-45.472,43.748)
C3': (-50.569,-47.914,42.168)
C1': (-52.455,-49.232,41.714)
C5': (-51.775,-46.626,44.036)
O6: (-55.508,-47.624,36.828)
O4': (-52.716,-48.502,42.879)
C8: (-54.385,-47.924,40.858)
C2: (-52.622,-49.590,37.286)
C6: (-54.599,-48.193,37.409)
C5: (-54.332,-48.207,38.776)
C4: (-53.256,-48.901,39.273)
P: (-53.986,-45.792,45.099)
C4': (-51.489,-47.945,43.380)
C2': (-50.960,-49.163,41.438)
O2': (-50.339,-50.278,42.058)
N1: (-53.670,-48.928,36.715)
N2: (-51.826,-50.238,36.426)
N3: (-52.365,-49.624,38.590)
N7: (-55.037,-47.604,39.782)
N9: (-53.279,-48.687,40.625)
O5': (-52.751,-46.765,45.045)
O3': (-49.204,-47.912,42.517)
OP1: (-42.381,-55.145,38.559)
OP2: (-43.180,-55.853,36.300)
C3': (-47.333,-54.501,39.103)
C1': (-48.083,-52.920,37.542)
C5': (-44.911,-53.765,38.936)
O4': (-46.724,-52.704,37.809)
C8: (-47.521,-54.556,35.741)
O2': (-49.216,-53.028,39.616)
C6: (-49.379,-53.592,32.943)
C5: (-48.712,-53.852,34.136)
C4: (-48.962,-53.022,35.202)
P: (-43.192,-54.884,37.375)
C4': (-46.346,-53.372,39.018)
C2': (-48.620,-53.837,38.614)
C2: (-50.371,-51.814,34.018)
N1: (-50.216,-52.540,32.907)
N3: (-49.794,-51.965,35.212)
N6: (-49.229,-54.327,31.860)
N7: (-47.805,-54.811,34.492)
N9: (-48.195,-53.497,36.219)
O5': (-44.666,-54.556,37.802)
O3': (-47.418,-55.059,40.397)
OP2: (-43.180,-55.853,36.300)
C3': (-47.333,-54.501,39.103)
C1': (-48.083,-52.920,37.542)
C5': (-44.911,-53.765,38.936)
O4': (-46.724,-52.704,37.809)
C8: (-47.521,-54.556,35.741)
O2': (-49.216,-53.028,39.616)
C6: (-49.379,-53.592,32.943)
C5: (-48.712,-53.852,34.136)
C4: (-48.962,-53.022,35.202)
P: (-43.192,-54.884,37.375)
C4': (-46.346,-53.372,39.018)
C2': (-48.620,-53.837,38.614)
C2: (-50.371,-51.814,34.018)
N1: (-50.216,-52.540,32.907)
N3: (-49.794,-51.965,35.212)
N6: (-49.229,-54.327,31.860)
N7: (-47.805,-54.811,34.492)
N9: (-48.195,-53.497,36.219)
O5': (-44.666,-54.556,37.802)
O3': (-47.418,-55.059,40.397)
Image (generated by PyMOL):