ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1G:A643:A702

Extra

PDB:
ATOM 1 O3' G A 642 -58.499 43.049 13.394 1.00 82.74 O
ATOM 2 P A A 643 -58.617 42.338 14.833 1.00 93.84 P
ATOM 3 OP1 A A 643 -59.451 43.180 15.715 1.00 67.37 O
ATOM 4 OP2 A A 643 -57.260 41.931 15.282 1.00 88.79 O
ATOM 5 O5' A A 643 -59.448 41.018 14.471 1.00 91.16 O
ATOM 6 C5' A A 643 -59.297 39.871 15.296 1.00 90.02 C
ATOM 7 C4' A A 643 -59.786 38.626 14.584 1.00 84.74 C
ATOM 8 O4' A A 643 -61.206 38.503 14.789 1.00 87.62 O
ATOM 9 C3' A A 643 -59.654 38.610 13.069 1.00 75.93 C
ATOM 10 O3' A A 643 -58.362 38.211 12.677 1.00 72.76 O
ATOM 11 C2' A A 643 -60.626 37.502 12.706 1.00 80.16 C
ATOM 12 O2' A A 643 -60.022 36.223 12.781 1.00 87.33 O
ATOM 13 C1' A A 643 -61.703 37.652 13.777 1.00 82.78 C
ATOM 14 N9 A A 643 -62.927 38.223 13.240 1.00 82.01 N
ATOM 15 C8 A A 643 -63.287 39.539 13.192 1.00 85.87 C
ATOM 16 N7 A A 643 -64.460 39.731 12.638 1.00 81.45 N
ATOM 17 C5 A A 643 -64.881 38.456 12.305 1.00 77.06 C
ATOM 18 C6 A A 643 -66.043 37.976 11.687 1.00 77.54 C
ATOM 19 N6 A A 643 -67.032 38.778 11.284 1.00 77.99 N
ATOM 20 N1 A A 643 -66.144 36.640 11.505 1.00 81.20 N
ATOM 21 C2 A A 643 -65.148 35.842 11.915 1.00 76.73 C
ATOM 22 N3 A A 643 -64.010 36.177 12.509 1.00 75.35 N
ATOM 23 C4 A A 643 -63.948 37.510 12.670 1.00 78.95 C
ATOM 24 P G A 644 -57.775 38.774 11.303 1.00 89.48 P
ATOM 25 OP1 G A 644 -56.515 39.467 11.657 1.00 94.49 O
ATOM 26 OP2 G A 644 -58.869 39.493 10.610 1.00 88.40 O
ATOM 27 O5' G A 644 -57.406 37.475 10.442 1.00 84.14 O
TER

ATOM 1 O3' U B 701 -71.271 48.200 6.369 1.00158.53 O
ATOM 2 P G B 702 -70.052 47.381 6.992 1.00122.33 P
ATOM 3 OP1 G B 702 -68.951 47.361 6.004 1.00102.60 O
ATOM 4 OP2 G B 702 -70.637 46.097 7.457 1.00106.45 O
ATOM 5 O5' G B 702 -69.580 48.263 8.253 1.00 86.02 O
ATOM 6 C5' G B 702 -68.506 49.186 8.122 1.00 81.12 C
ATOM 7 C4' G B 702 -67.299 48.850 8.994 1.00 80.02 C
ATOM 8 O4' G B 702 -67.724 48.262 10.254 1.00 80.74 O
ATOM 9 C3' G B 702 -66.281 47.846 8.462 1.00 79.01 C
ATOM 10 O3' G B 702 -65.397 48.421 7.500 1.00 78.01 O
ATOM 11 C2' G B 702 -65.539 47.520 9.757 1.00 81.47 C
ATOM 12 O2' G B 702 -64.610 48.516 10.137 1.00 76.43 O
ATOM 13 C1' G B 702 -66.695 47.425 10.750 1.00 85.85 C
ATOM 14 N9 G B 702 -67.184 46.061 10.756 1.00 82.80 N
ATOM 15 C8 G B 702 -68.409 45.621 10.331 1.00 88.04 C
ATOM 16 N7 G B 702 -68.566 44.332 10.425 1.00 89.50 N
ATOM 17 C5 G B 702 -67.356 43.890 10.934 1.00 85.25 C
ATOM 18 C6 G B 702 -66.932 42.579 11.248 1.00 87.12 C
ATOM 19 O6 G B 702 -67.559 41.517 11.131 1.00 87.88 O
ATOM 20 N1 G B 702 -65.635 42.567 11.743 1.00 74.77 N
ATOM 21 C2 G B 702 -64.855 43.680 11.907 1.00 74.12 C
ATOM 22 N2 G B 702 -63.630 43.465 12.397 1.00 82.21 N
ATOM 23 N3 G B 702 -65.237 44.913 11.617 1.00 77.14 N
ATOM 24 C4 G B 702 -66.496 44.941 11.137 1.00 76.60 C
ATOM 25 P G B 703 -64.647 47.515 6.402 1.00 87.47 P
ATOM 26 OP1 G B 703 -63.967 48.414 5.439 1.00 79.60 O
ATOM 27 OP2 G B 703 -65.618 46.511 5.898 1.00 80.64 O
ATOM 28 O5' G B 703 -63.507 46.776 7.255 1.00 75.26 O
TER

Atoms:
OP1: (-59.451,43.180,15.715)
OP2: (-57.260,41.931,15.282)
C3': (-59.654,38.610,13.069)
C1': (-61.703,37.652,13.777)
C5': (-59.297,39.871,15.296)
O4': (-61.206,38.503,14.789)
C8: (-63.287,39.539,13.192)
O2': (-60.022,36.223,12.781)
C6: (-66.043,37.976,11.687)
C5: (-64.881,38.456,12.305)
C4: (-63.948,37.510,12.670)
P: (-58.617,42.338,14.833)
C4': (-59.786,38.626,14.584)
C2': (-60.626,37.502,12.706)
C2: (-65.148,35.842,11.915)
N1: (-66.144,36.640,11.505)
N3: (-64.010,36.177,12.509)
N6: (-67.032,38.778,11.284)
N7: (-64.460,39.731,12.638)
N9: (-62.927,38.223,13.240)
O5': (-59.448,41.018,14.471)
O3': (-58.362,38.211,12.677)
OP1: (-68.951,47.361,6.004)
OP2: (-70.637,46.097,7.457)
C3': (-66.281,47.846,8.462)
C1': (-66.695,47.425,10.750)
C5': (-68.506,49.186,8.122)
O6: (-67.559,41.517,11.131)
O4': (-67.724,48.262,10.254)
C8: (-68.409,45.621,10.331)
C2: (-64.855,43.680,11.907)
C6: (-66.932,42.579,11.248)
C5: (-67.356,43.890,10.934)
C4: (-66.496,44.941,11.137)
P: (-70.052,47.381,6.992)
C4': (-67.299,48.850,8.994)
C2': (-65.539,47.520,9.757)
O2': (-64.610,48.516,10.137)
N1: (-65.635,42.567,11.743)
N2: (-63.630,43.465,12.397)
N3: (-65.237,44.913,11.617)
N7: (-68.566,44.332,10.425)
N9: (-67.184,46.061,10.756)
O5': (-69.580,48.263,8.253)
O3': (-65.397,48.421,7.500)
Image (generated by PyMOL):
PyMOL image
show in jmol