Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12094:12095
Extra
PDB:
ATOM 1 O3' U A2093 -2.235 4.173 60.360 1.00 45.07 O
ATOM 2 P C A2094 -1.342 5.305 59.691 1.00 44.87 P
ATOM 3 OP1 C A2094 -0.809 4.759 58.419 1.00 44.79 O
ATOM 4 OP2 C A2094 -0.388 5.793 60.731 1.00 44.65 O
ATOM 5 O5' C A2094 -2.390 6.428 59.384 1.00 45.23 O
ATOM 6 C5' C A2094 -3.040 7.122 60.435 1.00 45.38 C
ATOM 7 C4' C A2094 -4.112 7.986 59.887 1.00 45.75 C
ATOM 8 O4' C A2094 -3.494 9.037 59.104 1.00 45.79 O
ATOM 9 C3' C A2094 -5.058 7.259 58.944 1.00 45.94 C
ATOM 10 O3' C A2094 -6.364 7.804 59.068 1.00 46.30 O
ATOM 11 C2' C A2094 -4.465 7.573 57.577 1.00 45.95 C
ATOM 12 O2' C A2094 -5.359 7.468 56.506 1.00 46.23 O
ATOM 13 C1' C A2094 -3.980 8.994 57.781 1.00 45.99 C
ATOM 14 N1 C A2094 -2.890 9.395 56.902 1.00 45.87 N
ATOM 15 C2 C A2094 -3.103 10.360 55.910 1.00 46.13 C
ATOM 16 O2 C A2094 -4.251 10.816 55.783 1.00 46.46 O
ATOM 17 N3 C A2094 -2.068 10.756 55.107 1.00 46.02 N
ATOM 18 C4 C A2094 -0.876 10.220 55.312 1.00 45.68 C
ATOM 19 N4 C A2094 0.137 10.612 54.545 1.00 45.58 N
ATOM 20 C5 C A2094 -0.641 9.253 56.316 1.00 45.41 C
ATOM 21 C6 C A2094 -1.660 8.866 57.086 1.00 45.52 C
ATOM 22 P G A2095 -7.326 7.307 60.278 1.00 44.88 P
ATOM 23 OP1 G A2095 -8.543 8.180 60.281 1.00 45.27 O
ATOM 24 OP2 G A2095 -6.517 7.233 61.501 1.00 44.60 O
ATOM 25 O5' G A2095 -7.742 5.818 59.827 1.00 44.84 O
TER
ATOM 1 O3' C B2094 -6.364 7.804 59.068 1.00 46.30 O
ATOM 2 P G B2095 -7.326 7.307 60.278 1.00 44.88 P
ATOM 3 OP1 G B2095 -8.543 8.180 60.281 1.00 45.27 O
ATOM 4 OP2 G B2095 -6.517 7.233 61.501 1.00 44.60 O
ATOM 5 O5' G B2095 -7.742 5.818 59.827 1.00 44.84 O
ATOM 6 C5' G B2095 -8.333 5.559 58.561 1.00 45.04 C
ATOM 7 C4' G B2095 -9.421 4.546 58.677 1.00 45.20 C
ATOM 8 O4' G B2095 -9.414 4.002 60.005 1.00 45.05 O
ATOM 9 C3' G B2095 -10.813 5.097 58.504 1.00 45.62 C
ATOM 10 O3' G B2095 -11.184 5.249 57.146 1.00 45.84 O
ATOM 11 C2' G B2095 -11.699 4.147 59.322 1.00 45.68 C
ATOM 12 O2' G B2095 -12.104 2.997 58.569 1.00 45.74 O
ATOM 13 C1' G B2095 -10.731 3.712 60.429 1.00 45.32 C
ATOM 14 N9 G B2095 -10.984 4.387 61.735 1.00 45.37 N
ATOM 15 C8 G B2095 -10.024 4.909 62.560 1.00 45.13 C
ATOM 16 N7 G B2095 -10.437 5.425 63.676 1.00 45.23 N
ATOM 17 C5 G B2095 -11.795 5.210 63.602 1.00 45.56 C
ATOM 18 C6 G B2095 -12.807 5.541 64.534 1.00 45.81 C
ATOM 19 O6 G B2095 -12.688 6.098 65.616 1.00 45.80 O
ATOM 20 N1 G B2095 -14.060 5.169 64.098 1.00 46.12 N
ATOM 21 C2 G B2095 -14.301 4.550 62.916 1.00 46.18 C
ATOM 22 N2 G B2095 -15.575 4.266 62.646 1.00 46.51 N
ATOM 23 N3 G B2095 -13.353 4.232 62.065 1.00 45.94 N
ATOM 24 C4 G B2095 -12.139 4.570 62.446 1.00 45.64 C
ATOM 25 P U B2096 -11.540 6.716 56.580 1.00 44.48 P
ATOM 26 OP1 U B2096 -11.141 6.766 55.149 1.00 44.52 O
ATOM 27 OP2 U B2096 -10.933 7.705 57.522 1.00 44.36 O
ATOM 28 O5' U B2096 -13.120 6.755 56.702 1.00 44.89 O
TER
ATOM 2 P C A2094 -1.342 5.305 59.691 1.00 44.87 P
ATOM 3 OP1 C A2094 -0.809 4.759 58.419 1.00 44.79 O
ATOM 4 OP2 C A2094 -0.388 5.793 60.731 1.00 44.65 O
ATOM 5 O5' C A2094 -2.390 6.428 59.384 1.00 45.23 O
ATOM 6 C5' C A2094 -3.040 7.122 60.435 1.00 45.38 C
ATOM 7 C4' C A2094 -4.112 7.986 59.887 1.00 45.75 C
ATOM 8 O4' C A2094 -3.494 9.037 59.104 1.00 45.79 O
ATOM 9 C3' C A2094 -5.058 7.259 58.944 1.00 45.94 C
ATOM 10 O3' C A2094 -6.364 7.804 59.068 1.00 46.30 O
ATOM 11 C2' C A2094 -4.465 7.573 57.577 1.00 45.95 C
ATOM 12 O2' C A2094 -5.359 7.468 56.506 1.00 46.23 O
ATOM 13 C1' C A2094 -3.980 8.994 57.781 1.00 45.99 C
ATOM 14 N1 C A2094 -2.890 9.395 56.902 1.00 45.87 N
ATOM 15 C2 C A2094 -3.103 10.360 55.910 1.00 46.13 C
ATOM 16 O2 C A2094 -4.251 10.816 55.783 1.00 46.46 O
ATOM 17 N3 C A2094 -2.068 10.756 55.107 1.00 46.02 N
ATOM 18 C4 C A2094 -0.876 10.220 55.312 1.00 45.68 C
ATOM 19 N4 C A2094 0.137 10.612 54.545 1.00 45.58 N
ATOM 20 C5 C A2094 -0.641 9.253 56.316 1.00 45.41 C
ATOM 21 C6 C A2094 -1.660 8.866 57.086 1.00 45.52 C
ATOM 22 P G A2095 -7.326 7.307 60.278 1.00 44.88 P
ATOM 23 OP1 G A2095 -8.543 8.180 60.281 1.00 45.27 O
ATOM 24 OP2 G A2095 -6.517 7.233 61.501 1.00 44.60 O
ATOM 25 O5' G A2095 -7.742 5.818 59.827 1.00 44.84 O
TER
ATOM 1 O3' C B2094 -6.364 7.804 59.068 1.00 46.30 O
ATOM 2 P G B2095 -7.326 7.307 60.278 1.00 44.88 P
ATOM 3 OP1 G B2095 -8.543 8.180 60.281 1.00 45.27 O
ATOM 4 OP2 G B2095 -6.517 7.233 61.501 1.00 44.60 O
ATOM 5 O5' G B2095 -7.742 5.818 59.827 1.00 44.84 O
ATOM 6 C5' G B2095 -8.333 5.559 58.561 1.00 45.04 C
ATOM 7 C4' G B2095 -9.421 4.546 58.677 1.00 45.20 C
ATOM 8 O4' G B2095 -9.414 4.002 60.005 1.00 45.05 O
ATOM 9 C3' G B2095 -10.813 5.097 58.504 1.00 45.62 C
ATOM 10 O3' G B2095 -11.184 5.249 57.146 1.00 45.84 O
ATOM 11 C2' G B2095 -11.699 4.147 59.322 1.00 45.68 C
ATOM 12 O2' G B2095 -12.104 2.997 58.569 1.00 45.74 O
ATOM 13 C1' G B2095 -10.731 3.712 60.429 1.00 45.32 C
ATOM 14 N9 G B2095 -10.984 4.387 61.735 1.00 45.37 N
ATOM 15 C8 G B2095 -10.024 4.909 62.560 1.00 45.13 C
ATOM 16 N7 G B2095 -10.437 5.425 63.676 1.00 45.23 N
ATOM 17 C5 G B2095 -11.795 5.210 63.602 1.00 45.56 C
ATOM 18 C6 G B2095 -12.807 5.541 64.534 1.00 45.81 C
ATOM 19 O6 G B2095 -12.688 6.098 65.616 1.00 45.80 O
ATOM 20 N1 G B2095 -14.060 5.169 64.098 1.00 46.12 N
ATOM 21 C2 G B2095 -14.301 4.550 62.916 1.00 46.18 C
ATOM 22 N2 G B2095 -15.575 4.266 62.646 1.00 46.51 N
ATOM 23 N3 G B2095 -13.353 4.232 62.065 1.00 45.94 N
ATOM 24 C4 G B2095 -12.139 4.570 62.446 1.00 45.64 C
ATOM 25 P U B2096 -11.540 6.716 56.580 1.00 44.48 P
ATOM 26 OP1 U B2096 -11.141 6.766 55.149 1.00 44.52 O
ATOM 27 OP2 U B2096 -10.933 7.705 57.522 1.00 44.36 O
ATOM 28 O5' U B2096 -13.120 6.755 56.702 1.00 44.89 O
TER
Atoms:
C2: (-3.103,10.360,55.910)
OP1: (-0.809,4.759,58.419)
OP2: (-0.388,5.793,60.731)
C4: (-0.876,10.220,55.312)
O5': (-2.390,6.428,59.384)
C3': (-5.058,7.259,58.944)
C1': (-3.980,8.994,57.781)
O4': (-3.494,9.037,59.104)
C5': (-3.040,7.122,60.435)
P: (-1.342,5.305,59.691)
O2: (-4.251,10.816,55.783)
C4': (-4.112,7.986,59.887)
C2': (-4.465,7.573,57.577)
O2': (-5.359,7.468,56.506)
N1: (-2.890,9.395,56.902)
N3: (-2.068,10.756,55.107)
N4: (0.137,10.612,54.545)
C6: (-1.660,8.866,57.086)
C5: (-0.641,9.253,56.316)
O3': (-6.364,7.804,59.068)
OP1: (-0.809,4.759,58.419)
OP2: (-0.388,5.793,60.731)
C4: (-0.876,10.220,55.312)
O5': (-2.390,6.428,59.384)
C3': (-5.058,7.259,58.944)
C1': (-3.980,8.994,57.781)
O4': (-3.494,9.037,59.104)
C5': (-3.040,7.122,60.435)
P: (-1.342,5.305,59.691)
O2: (-4.251,10.816,55.783)
C4': (-4.112,7.986,59.887)
C2': (-4.465,7.573,57.577)
O2': (-5.359,7.468,56.506)
N1: (-2.890,9.395,56.902)
N3: (-2.068,10.756,55.107)
N4: (0.137,10.612,54.545)
C6: (-1.660,8.866,57.086)
C5: (-0.641,9.253,56.316)
O3': (-6.364,7.804,59.068)
OP1: (-8.543,8.180,60.281)
OP2: (-6.517,7.233,61.501)
C3': (-10.813,5.097,58.504)
C1': (-10.731,3.712,60.429)
C5': (-8.333,5.559,58.561)
O6: (-12.688,6.098,65.616)
O4': (-9.414,4.002,60.005)
C8: (-10.024,4.909,62.560)
C2: (-14.301,4.550,62.916)
C6: (-12.807,5.541,64.534)
C5: (-11.795,5.210,63.602)
C4: (-12.139,4.570,62.446)
P: (-7.326,7.307,60.278)
C4': (-9.421,4.546,58.677)
C2': (-11.699,4.147,59.322)
O2': (-12.104,2.997,58.569)
N1: (-14.060,5.169,64.098)
N2: (-15.575,4.266,62.646)
N3: (-13.353,4.232,62.065)
N7: (-10.437,5.425,63.676)
N9: (-10.984,4.387,61.735)
O5': (-7.742,5.818,59.827)
O3': (-11.184,5.249,57.146)
OP2: (-6.517,7.233,61.501)
C3': (-10.813,5.097,58.504)
C1': (-10.731,3.712,60.429)
C5': (-8.333,5.559,58.561)
O6: (-12.688,6.098,65.616)
O4': (-9.414,4.002,60.005)
C8: (-10.024,4.909,62.560)
C2: (-14.301,4.550,62.916)
C6: (-12.807,5.541,64.534)
C5: (-11.795,5.210,63.602)
C4: (-12.139,4.570,62.446)
P: (-7.326,7.307,60.278)
C4': (-9.421,4.546,58.677)
C2': (-11.699,4.147,59.322)
O2': (-12.104,2.997,58.569)
N1: (-14.060,5.169,64.098)
N2: (-15.575,4.266,62.646)
N3: (-13.353,4.232,62.065)
N7: (-10.437,5.425,63.676)
N9: (-10.984,4.387,61.735)
O5': (-7.742,5.818,59.827)
O3': (-11.184,5.249,57.146)
Image (generated by PyMOL):