ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1MJI:C14:C15

Extra

PDB:
ATOM 1 O3' A A 13 18.035 -14.200 21.128 1.00 30.42 O
ATOM 2 P U A 14 17.163 -14.492 19.818 1.00 31.53 P
ATOM 3 OP1 U A 14 16.095 -15.434 20.217 1.00 31.01 O
ATOM 4 OP2 U A 14 18.094 -14.865 18.727 1.00 33.68 O
ATOM 5 O5' U A 14 16.515 -13.077 19.480 1.00 30.81 O
ATOM 6 C5' U A 14 15.829 -12.298 20.469 1.00 29.31 C
ATOM 7 C4' U A 14 15.458 -10.956 19.877 1.00 30.73 C
ATOM 8 O4' U A 14 16.646 -10.150 19.732 1.00 30.17 O
ATOM 9 C3' U A 14 14.869 -11.114 18.489 1.00 32.97 C
ATOM 10 O3' U A 14 13.437 -11.269 18.538 1.00 38.59 O
ATOM 11 C2' U A 14 15.481 -10.013 17.622 1.00 31.74 C
ATOM 12 O2' U A 14 14.611 -8.983 17.220 1.00 35.61 O
ATOM 13 C1' U A 14 16.650 -9.504 18.477 1.00 30.21 C
ATOM 14 N1 U A 14 17.997 -9.633 17.906 1.00 28.84 N
ATOM 15 C2 U A 14 18.686 -8.461 17.625 1.00 27.89 C
ATOM 16 O2 U A 14 18.222 -7.355 17.829 1.00 25.71 O
ATOM 17 N3 U A 14 19.942 -8.633 17.103 1.00 27.35 N
ATOM 18 C4 U A 14 20.572 -9.822 16.840 1.00 28.73 C
ATOM 19 O4 U A 14 21.713 -9.808 16.377 1.00 28.95 O
ATOM 20 C5 U A 14 19.800 -10.989 17.157 1.00 28.84 C
ATOM 21 C6 U A 14 18.565 -10.855 17.666 1.00 28.40 C
ATOM 22 P G A 15 12.465 -10.070 19.053 1.00 36.51 P
ATOM 23 OP1 G A 15 13.002 -8.715 18.812 1.00 38.75 O
ATOM 24 OP2 G A 15 11.998 -10.430 20.409 1.00 38.24 O
ATOM 25 O5' G A 15 11.219 -10.231 18.083 1.00 42.16 O
TER

ATOM 1 O3' U B 14 13.437 -11.269 18.538 1.00 38.59 O
ATOM 2 P G B 15 12.465 -10.070 19.053 1.00 36.51 P
ATOM 3 OP1 G B 15 13.002 -8.715 18.812 1.00 38.75 O
ATOM 4 OP2 G B 15 11.998 -10.430 20.409 1.00 38.24 O
ATOM 5 O5' G B 15 11.219 -10.231 18.083 1.00 42.16 O
ATOM 6 C5' G B 15 11.429 -10.458 16.690 1.00 48.10 C
ATOM 7 C4' G B 15 10.957 -11.841 16.301 1.00 50.84 C
ATOM 8 O4' G B 15 9.568 -11.989 16.700 1.00 55.20 O
ATOM 9 C3' G B 15 10.989 -12.103 14.800 1.00 51.51 C
ATOM 10 O3' G B 15 12.237 -12.693 14.415 1.00 46.61 O
ATOM 11 C2' G B 15 9.796 -13.032 14.603 1.00 54.37 C
ATOM 12 O2' G B 15 10.094 -14.362 14.980 1.00 54.86 O
ATOM 13 C1' G B 15 8.797 -12.454 15.609 1.00 57.41 C
ATOM 14 N9 G B 15 7.991 -11.325 15.144 1.00 61.82 N
ATOM 15 C8 G B 15 8.442 -10.060 14.845 1.00 63.19 C
ATOM 16 N7 G B 15 7.484 -9.234 14.517 1.00 65.12 N
ATOM 17 C5 G B 15 6.328 -10.001 14.589 1.00 66.47 C
ATOM 18 C6 G B 15 4.964 -9.643 14.346 1.00 68.24 C
ATOM 19 O6 G B 15 4.499 -8.539 14.012 1.00 69.00 O
ATOM 20 N1 G B 15 4.108 -10.731 14.534 1.00 68.13 N
ATOM 21 C2 G B 15 4.506 -11.997 14.910 1.00 67.33 C
ATOM 22 N2 G B 15 3.525 -12.912 15.040 1.00 66.64 N
ATOM 23 N3 G B 15 5.772 -12.342 15.141 1.00 66.11 N
ATOM 24 C4 G B 15 6.623 -11.301 14.963 1.00 64.84 C
ATOM 25 P C B 16 12.804 -12.467 12.924 1.00 40.94 P
ATOM 26 OP1 C B 16 11.718 -12.854 11.993 1.00 41.79 O
ATOM 27 OP2 C B 16 14.150 -13.085 12.795 1.00 39.31 O
ATOM 28 O5' C B 16 12.970 -10.892 12.799 1.00 38.05 O
TER

Atoms:
C4: (20.572,-9.822,16.840)
N3: (19.942,-8.633,17.103)
OP1: (16.095,-15.434,20.217)
OP2: (18.094,-14.865,18.727)
C2: (18.686,-8.461,17.625)
C1': (16.650,-9.504,18.477)
C3': (14.869,-11.114,18.489)
O5': (16.515,-13.077,19.480)
O4': (16.646,-10.150,19.732)
C5': (15.829,-12.298,20.469)
P: (17.163,-14.492,19.818)
C4': (15.458,-10.956,19.877)
C2': (15.481,-10.013,17.622)
O2': (14.611,-8.983,17.220)
N1: (17.997,-9.633,17.906)
O4: (21.713,-9.808,16.377)
O2: (18.222,-7.355,17.829)
C6: (18.565,-10.855,17.666)
C5: (19.800,-10.989,17.157)
O3': (13.437,-11.269,18.538)
OP1: (13.002,-8.715,18.812)
OP2: (11.998,-10.430,20.409)
C3': (10.989,-12.103,14.800)
C1': (8.797,-12.454,15.609)
C5': (11.429,-10.458,16.690)
O6: (4.499,-8.539,14.012)
O4': (9.568,-11.989,16.700)
C8: (8.442,-10.060,14.845)
C2: (4.506,-11.997,14.910)
C6: (4.964,-9.643,14.346)
C5: (6.328,-10.001,14.589)
C4: (6.623,-11.301,14.963)
P: (12.465,-10.070,19.053)
C4': (10.957,-11.841,16.301)
C2': (9.796,-13.032,14.603)
O2': (10.094,-14.362,14.980)
N1: (4.108,-10.731,14.534)
N2: (3.525,-12.912,15.040)
N3: (5.772,-12.342,15.141)
N7: (7.484,-9.234,14.517)
N9: (7.991,-11.325,15.144)
O5': (11.219,-10.231,18.083)
O3': (12.237,-12.693,14.415)
Image (generated by PyMOL):
PyMOL image
show in jmol