Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2PXB:B12:B13
Extra
PDB:
ATOM 1 O3' C A 11 232.877 -3.120 39.965 1.00 44.38 O
ATOM 2 P C A 12 233.834 -4.012 40.896 1.00 47.87 P
ATOM 3 OP1 C A 12 233.177 -5.321 41.131 1.00 53.92 O
ATOM 4 OP2 C A 12 234.215 -3.172 42.061 1.00 51.91 O
ATOM 5 O5' C A 12 235.120 -4.259 39.987 1.00 51.67 O
ATOM 6 C5' C A 12 235.071 -5.130 38.860 1.00 61.09 C
ATOM 7 C4' C A 12 236.445 -5.258 38.238 1.00 69.19 C
ATOM 8 O4' C A 12 236.824 -3.986 37.653 1.00 70.01 O
ATOM 9 C3' C A 12 237.568 -5.603 39.207 1.00 75.23 C
ATOM 10 O3' C A 12 237.687 -7.019 39.370 1.00 82.44 O
ATOM 11 C2' C A 12 238.787 -4.986 38.529 1.00 74.95 C
ATOM 12 O2' C A 12 239.305 -5.793 37.492 1.00 77.96 O
ATOM 13 C1' C A 12 238.188 -3.716 37.920 1.00 72.37 C
ATOM 14 N1 C A 12 238.241 -2.551 38.815 1.00 76.20 N
ATOM 15 C2 C A 12 239.284 -1.640 38.682 1.00 75.67 C
ATOM 16 O2 C A 12 240.160 -1.857 37.835 1.00 75.97 O
ATOM 17 N3 C A 12 239.313 -0.547 39.481 1.00 75.14 N
ATOM 18 C4 C A 12 238.351 -0.361 40.390 1.00 75.22 C
ATOM 19 N4 C A 12 238.395 0.741 41.145 1.00 74.43 N
ATOM 20 C5 C A 12 237.292 -1.290 40.562 1.00 75.35 C
ATOM 21 C6 C A 12 237.274 -2.358 39.761 1.00 76.19 C
ATOM 22 P A A 13 238.459 -7.618 40.649 1.00118.42 P
ATOM 23 OP1 A A 13 239.332 -6.551 41.199 1.00117.32 O
ATOM 24 OP2 A A 13 239.057 -8.906 40.217 1.00118.76 O
ATOM 25 O5' A A 13 237.317 -7.941 41.720 1.00121.75 O
TER
ATOM 1 O3' C B 12 237.687 -7.019 39.370 1.00 82.44 O
ATOM 2 P A B 13 238.459 -7.618 40.649 1.00118.42 P
ATOM 3 OP1 A B 13 239.332 -6.551 41.199 1.00117.32 O
ATOM 4 OP2 A B 13 239.057 -8.906 40.217 1.00118.76 O
ATOM 5 O5' A B 13 237.317 -7.941 41.720 1.00121.75 O
ATOM 6 C5' A B 13 235.941 -8.020 41.342 1.00127.54 C
ATOM 7 C4' A B 13 235.333 -9.336 41.795 1.00130.47 C
ATOM 8 O4' A B 13 235.990 -10.427 41.107 1.00134.17 O
ATOM 9 C3' A B 13 235.457 -9.684 43.274 1.00130.08 C
ATOM 10 O3' A B 13 234.352 -9.150 43.996 1.00123.59 O
ATOM 11 C2' A B 13 235.350 -11.208 43.277 1.00133.58 C
ATOM 12 O2' A B 13 234.013 -11.659 43.360 1.00135.15 O
ATOM 13 C1' A B 13 235.944 -11.588 41.915 1.00137.06 C
ATOM 14 N9 A B 13 237.282 -12.179 41.963 1.00141.45 N
ATOM 15 C8 A B 13 238.494 -11.545 42.087 1.00143.20 C
ATOM 16 N7 A B 13 239.520 -12.362 42.092 1.00144.54 N
ATOM 17 C5 A B 13 238.945 -13.621 41.965 1.00145.13 C
ATOM 18 C6 A B 13 239.498 -14.915 41.907 1.00145.77 C
ATOM 19 N6 A B 13 240.808 -15.164 41.971 1.00146.12 N
ATOM 20 N1 A B 13 238.645 -15.957 41.780 1.00146.20 N
ATOM 21 C2 A B 13 237.331 -15.706 41.715 1.00145.99 C
ATOM 22 N3 A B 13 236.693 -14.538 41.758 1.00145.36 N
ATOM 23 C4 A B 13 237.567 -13.523 41.886 1.00144.15 C
ATOM 24 P G B 14 234.594 -8.041 45.127 1.00 95.51 P
ATOM 25 OP1 G B 14 233.763 -6.855 44.786 1.00 88.30 O
ATOM 26 OP2 G B 14 236.062 -7.886 45.303 1.00 89.04 O
ATOM 27 O5' G B 14 233.996 -8.690 46.454 1.00 90.75 O
TER
ATOM 2 P C A 12 233.834 -4.012 40.896 1.00 47.87 P
ATOM 3 OP1 C A 12 233.177 -5.321 41.131 1.00 53.92 O
ATOM 4 OP2 C A 12 234.215 -3.172 42.061 1.00 51.91 O
ATOM 5 O5' C A 12 235.120 -4.259 39.987 1.00 51.67 O
ATOM 6 C5' C A 12 235.071 -5.130 38.860 1.00 61.09 C
ATOM 7 C4' C A 12 236.445 -5.258 38.238 1.00 69.19 C
ATOM 8 O4' C A 12 236.824 -3.986 37.653 1.00 70.01 O
ATOM 9 C3' C A 12 237.568 -5.603 39.207 1.00 75.23 C
ATOM 10 O3' C A 12 237.687 -7.019 39.370 1.00 82.44 O
ATOM 11 C2' C A 12 238.787 -4.986 38.529 1.00 74.95 C
ATOM 12 O2' C A 12 239.305 -5.793 37.492 1.00 77.96 O
ATOM 13 C1' C A 12 238.188 -3.716 37.920 1.00 72.37 C
ATOM 14 N1 C A 12 238.241 -2.551 38.815 1.00 76.20 N
ATOM 15 C2 C A 12 239.284 -1.640 38.682 1.00 75.67 C
ATOM 16 O2 C A 12 240.160 -1.857 37.835 1.00 75.97 O
ATOM 17 N3 C A 12 239.313 -0.547 39.481 1.00 75.14 N
ATOM 18 C4 C A 12 238.351 -0.361 40.390 1.00 75.22 C
ATOM 19 N4 C A 12 238.395 0.741 41.145 1.00 74.43 N
ATOM 20 C5 C A 12 237.292 -1.290 40.562 1.00 75.35 C
ATOM 21 C6 C A 12 237.274 -2.358 39.761 1.00 76.19 C
ATOM 22 P A A 13 238.459 -7.618 40.649 1.00118.42 P
ATOM 23 OP1 A A 13 239.332 -6.551 41.199 1.00117.32 O
ATOM 24 OP2 A A 13 239.057 -8.906 40.217 1.00118.76 O
ATOM 25 O5' A A 13 237.317 -7.941 41.720 1.00121.75 O
TER
ATOM 1 O3' C B 12 237.687 -7.019 39.370 1.00 82.44 O
ATOM 2 P A B 13 238.459 -7.618 40.649 1.00118.42 P
ATOM 3 OP1 A B 13 239.332 -6.551 41.199 1.00117.32 O
ATOM 4 OP2 A B 13 239.057 -8.906 40.217 1.00118.76 O
ATOM 5 O5' A B 13 237.317 -7.941 41.720 1.00121.75 O
ATOM 6 C5' A B 13 235.941 -8.020 41.342 1.00127.54 C
ATOM 7 C4' A B 13 235.333 -9.336 41.795 1.00130.47 C
ATOM 8 O4' A B 13 235.990 -10.427 41.107 1.00134.17 O
ATOM 9 C3' A B 13 235.457 -9.684 43.274 1.00130.08 C
ATOM 10 O3' A B 13 234.352 -9.150 43.996 1.00123.59 O
ATOM 11 C2' A B 13 235.350 -11.208 43.277 1.00133.58 C
ATOM 12 O2' A B 13 234.013 -11.659 43.360 1.00135.15 O
ATOM 13 C1' A B 13 235.944 -11.588 41.915 1.00137.06 C
ATOM 14 N9 A B 13 237.282 -12.179 41.963 1.00141.45 N
ATOM 15 C8 A B 13 238.494 -11.545 42.087 1.00143.20 C
ATOM 16 N7 A B 13 239.520 -12.362 42.092 1.00144.54 N
ATOM 17 C5 A B 13 238.945 -13.621 41.965 1.00145.13 C
ATOM 18 C6 A B 13 239.498 -14.915 41.907 1.00145.77 C
ATOM 19 N6 A B 13 240.808 -15.164 41.971 1.00146.12 N
ATOM 20 N1 A B 13 238.645 -15.957 41.780 1.00146.20 N
ATOM 21 C2 A B 13 237.331 -15.706 41.715 1.00145.99 C
ATOM 22 N3 A B 13 236.693 -14.538 41.758 1.00145.36 N
ATOM 23 C4 A B 13 237.567 -13.523 41.886 1.00144.15 C
ATOM 24 P G B 14 234.594 -8.041 45.127 1.00 95.51 P
ATOM 25 OP1 G B 14 233.763 -6.855 44.786 1.00 88.30 O
ATOM 26 OP2 G B 14 236.062 -7.886 45.303 1.00 89.04 O
ATOM 27 O5' G B 14 233.996 -8.690 46.454 1.00 90.75 O
TER
Atoms:
C2: (239.284,-1.640,38.682)
OP1: (233.177,-5.321,41.131)
OP2: (234.215,-3.172,42.061)
C4: (238.351,-0.361,40.390)
O5': (235.120,-4.259,39.987)
C3': (237.568,-5.603,39.207)
C1': (238.188,-3.716,37.920)
O4': (236.824,-3.986,37.653)
C5': (235.071,-5.130,38.860)
P: (233.834,-4.012,40.896)
O2: (240.160,-1.857,37.835)
C4': (236.445,-5.258,38.238)
C2': (238.787,-4.986,38.529)
O2': (239.305,-5.793,37.492)
N1: (238.241,-2.551,38.815)
N3: (239.313,-0.547,39.481)
N4: (238.395,0.741,41.145)
C6: (237.274,-2.358,39.761)
C5: (237.292,-1.290,40.562)
O3': (237.687,-7.019,39.370)
OP1: (233.177,-5.321,41.131)
OP2: (234.215,-3.172,42.061)
C4: (238.351,-0.361,40.390)
O5': (235.120,-4.259,39.987)
C3': (237.568,-5.603,39.207)
C1': (238.188,-3.716,37.920)
O4': (236.824,-3.986,37.653)
C5': (235.071,-5.130,38.860)
P: (233.834,-4.012,40.896)
O2: (240.160,-1.857,37.835)
C4': (236.445,-5.258,38.238)
C2': (238.787,-4.986,38.529)
O2': (239.305,-5.793,37.492)
N1: (238.241,-2.551,38.815)
N3: (239.313,-0.547,39.481)
N4: (238.395,0.741,41.145)
C6: (237.274,-2.358,39.761)
C5: (237.292,-1.290,40.562)
O3': (237.687,-7.019,39.370)
OP1: (239.332,-6.551,41.199)
OP2: (239.057,-8.906,40.217)
C3': (235.457,-9.684,43.274)
C1': (235.944,-11.588,41.915)
C5': (235.941,-8.020,41.342)
O4': (235.990,-10.427,41.107)
C8: (238.494,-11.545,42.087)
O2': (234.013,-11.659,43.360)
C6: (239.498,-14.915,41.907)
C5: (238.945,-13.621,41.965)
C4: (237.567,-13.523,41.886)
P: (238.459,-7.618,40.649)
C4': (235.333,-9.336,41.795)
C2': (235.350,-11.208,43.277)
C2: (237.331,-15.706,41.715)
N1: (238.645,-15.957,41.780)
N3: (236.693,-14.538,41.758)
N6: (240.808,-15.164,41.971)
N7: (239.520,-12.362,42.092)
N9: (237.282,-12.179,41.963)
O5': (237.317,-7.941,41.720)
O3': (234.352,-9.150,43.996)
OP2: (239.057,-8.906,40.217)
C3': (235.457,-9.684,43.274)
C1': (235.944,-11.588,41.915)
C5': (235.941,-8.020,41.342)
O4': (235.990,-10.427,41.107)
C8: (238.494,-11.545,42.087)
O2': (234.013,-11.659,43.360)
C6: (239.498,-14.915,41.907)
C5: (238.945,-13.621,41.965)
C4: (237.567,-13.523,41.886)
P: (238.459,-7.618,40.649)
C4': (235.333,-9.336,41.795)
C2': (235.350,-11.208,43.277)
C2: (237.331,-15.706,41.715)
N1: (238.645,-15.957,41.780)
N3: (236.693,-14.538,41.758)
N6: (240.808,-15.164,41.971)
N7: (239.520,-12.362,42.092)
N9: (237.282,-12.179,41.963)
O5': (237.317,-7.941,41.720)
O3': (234.352,-9.150,43.996)
Image (generated by PyMOL):