Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A1123:A2017
Extra
PDB:
ATOM 1 O3' A A1122 -59.321 103.698 175.377 1.00 0.02 O
ATOM 2 P U A1123 -58.243 104.824 175.630 1.00 0.01 P
ATOM 3 OP1 U A1123 -58.983 106.064 175.960 1.00 0.01 O
ATOM 4 OP2 U A1123 -57.330 104.810 174.450 1.00 0.01 O
ATOM 5 O5' U A1123 -57.471 104.291 176.910 1.00 0.01 O
ATOM 6 C5' U A1123 -56.933 102.979 176.943 1.00 0.01 C
ATOM 7 C4' U A1123 -56.331 102.697 178.277 1.00 0.01 C
ATOM 8 O4' U A1123 -55.460 103.811 178.632 1.00 0.01 O
ATOM 9 C3' U A1123 -57.345 102.609 179.412 1.00 0.01 C
ATOM 10 O3' U A1123 -56.832 101.774 180.459 1.00 0.01 O
ATOM 11 C2' U A1123 -57.383 104.054 179.881 1.00 0.01 C
ATOM 12 O2' U A1123 -57.938 104.263 181.153 1.00 0.01 O
ATOM 13 C1' U A1123 -55.915 104.381 179.838 1.00 0.01 C
ATOM 14 N1 U A1123 -55.642 105.790 179.816 1.00 0.04 N
ATOM 15 C2 U A1123 -54.728 106.317 180.741 1.00 0.04 C
ATOM 16 O2 U A1123 -54.100 105.683 181.603 1.00 0.04 O
ATOM 17 N3 U A1123 -54.566 107.682 180.607 1.00 0.04 N
ATOM 18 C4 U A1123 -55.202 108.519 179.729 1.00 0.04 C
ATOM 19 O4 U A1123 -54.943 109.704 179.793 1.00 0.04 O
ATOM 20 C5 U A1123 -56.120 107.892 178.833 1.00 0.04 C
ATOM 21 C6 U A1123 -56.310 106.569 178.906 1.00 0.04 C
ATOM 22 P G A1124 -57.676 100.509 180.979 1.00 0.01 P
ATOM 23 OP1 G A1124 -56.822 99.776 181.902 1.00 0.01 O
ATOM 24 OP2 G A1124 -58.200 99.813 179.789 1.00 0.01 O
ATOM 25 O5' G A1124 -58.874 101.163 181.771 1.00 0.01 O
TER
ATOM 1 O3' G B2016 -53.279 108.013 185.205 1.00 0.01 O
ATOM 2 P C B2017 -53.914 109.072 184.213 1.00 0.01 P
ATOM 3 OP1 C B2017 -53.294 108.869 182.889 1.00 0.01 O
ATOM 4 OP2 C B2017 -53.765 110.394 184.865 1.00 0.01 O
ATOM 5 O5' C B2017 -55.443 108.644 184.195 1.00 0.01 O
ATOM 6 C5' C B2017 -55.850 107.435 183.600 1.00 0.01 C
ATOM 7 C4' C B2017 -57.023 106.835 184.324 1.00 0.01 C
ATOM 8 O4' C B2017 -56.857 107.032 185.738 1.00 0.01 O
ATOM 9 C3' C B2017 -58.384 107.443 184.034 1.00 0.01 C
ATOM 10 O3' C B2017 -58.972 106.949 182.855 1.00 0.01 O
ATOM 11 C2' C B2017 -59.157 107.080 185.276 1.00 0.01 C
ATOM 12 O2' C B2017 -59.481 105.713 185.267 1.00 0.01 O
ATOM 13 C1' C B2017 -58.103 107.291 186.334 1.00 0.01 C
ATOM 14 N1 C B2017 -58.096 108.676 186.851 1.00 0.39 N
ATOM 15 C2 C B2017 -59.199 109.173 187.559 1.00 0.39 C
ATOM 16 O2 C B2017 -60.182 108.416 187.696 1.00 0.39 O
ATOM 17 N3 C B2017 -59.155 110.444 188.059 1.00 0.39 N
ATOM 18 C4 C B2017 -58.064 111.210 187.876 1.00 0.39 C
ATOM 19 N4 C B2017 -58.004 112.463 188.359 1.00 0.39 N
ATOM 20 C5 C B2017 -56.942 110.703 187.161 1.00 0.39 C
ATOM 21 C6 C B2017 -56.991 109.452 186.675 1.00 0.39 C
ATOM 22 P U B2018 -59.088 107.881 181.566 1.00 0.01 P
ATOM 23 OP1 U B2018 -58.905 107.012 180.401 1.00 0.01 O
ATOM 24 OP2 U B2018 -58.162 109.021 181.749 1.00 0.01 O
ATOM 25 O5' U B2018 -60.574 108.401 181.634 1.00 0.01 O
TER
ATOM 2 P U A1123 -58.243 104.824 175.630 1.00 0.01 P
ATOM 3 OP1 U A1123 -58.983 106.064 175.960 1.00 0.01 O
ATOM 4 OP2 U A1123 -57.330 104.810 174.450 1.00 0.01 O
ATOM 5 O5' U A1123 -57.471 104.291 176.910 1.00 0.01 O
ATOM 6 C5' U A1123 -56.933 102.979 176.943 1.00 0.01 C
ATOM 7 C4' U A1123 -56.331 102.697 178.277 1.00 0.01 C
ATOM 8 O4' U A1123 -55.460 103.811 178.632 1.00 0.01 O
ATOM 9 C3' U A1123 -57.345 102.609 179.412 1.00 0.01 C
ATOM 10 O3' U A1123 -56.832 101.774 180.459 1.00 0.01 O
ATOM 11 C2' U A1123 -57.383 104.054 179.881 1.00 0.01 C
ATOM 12 O2' U A1123 -57.938 104.263 181.153 1.00 0.01 O
ATOM 13 C1' U A1123 -55.915 104.381 179.838 1.00 0.01 C
ATOM 14 N1 U A1123 -55.642 105.790 179.816 1.00 0.04 N
ATOM 15 C2 U A1123 -54.728 106.317 180.741 1.00 0.04 C
ATOM 16 O2 U A1123 -54.100 105.683 181.603 1.00 0.04 O
ATOM 17 N3 U A1123 -54.566 107.682 180.607 1.00 0.04 N
ATOM 18 C4 U A1123 -55.202 108.519 179.729 1.00 0.04 C
ATOM 19 O4 U A1123 -54.943 109.704 179.793 1.00 0.04 O
ATOM 20 C5 U A1123 -56.120 107.892 178.833 1.00 0.04 C
ATOM 21 C6 U A1123 -56.310 106.569 178.906 1.00 0.04 C
ATOM 22 P G A1124 -57.676 100.509 180.979 1.00 0.01 P
ATOM 23 OP1 G A1124 -56.822 99.776 181.902 1.00 0.01 O
ATOM 24 OP2 G A1124 -58.200 99.813 179.789 1.00 0.01 O
ATOM 25 O5' G A1124 -58.874 101.163 181.771 1.00 0.01 O
TER
ATOM 1 O3' G B2016 -53.279 108.013 185.205 1.00 0.01 O
ATOM 2 P C B2017 -53.914 109.072 184.213 1.00 0.01 P
ATOM 3 OP1 C B2017 -53.294 108.869 182.889 1.00 0.01 O
ATOM 4 OP2 C B2017 -53.765 110.394 184.865 1.00 0.01 O
ATOM 5 O5' C B2017 -55.443 108.644 184.195 1.00 0.01 O
ATOM 6 C5' C B2017 -55.850 107.435 183.600 1.00 0.01 C
ATOM 7 C4' C B2017 -57.023 106.835 184.324 1.00 0.01 C
ATOM 8 O4' C B2017 -56.857 107.032 185.738 1.00 0.01 O
ATOM 9 C3' C B2017 -58.384 107.443 184.034 1.00 0.01 C
ATOM 10 O3' C B2017 -58.972 106.949 182.855 1.00 0.01 O
ATOM 11 C2' C B2017 -59.157 107.080 185.276 1.00 0.01 C
ATOM 12 O2' C B2017 -59.481 105.713 185.267 1.00 0.01 O
ATOM 13 C1' C B2017 -58.103 107.291 186.334 1.00 0.01 C
ATOM 14 N1 C B2017 -58.096 108.676 186.851 1.00 0.39 N
ATOM 15 C2 C B2017 -59.199 109.173 187.559 1.00 0.39 C
ATOM 16 O2 C B2017 -60.182 108.416 187.696 1.00 0.39 O
ATOM 17 N3 C B2017 -59.155 110.444 188.059 1.00 0.39 N
ATOM 18 C4 C B2017 -58.064 111.210 187.876 1.00 0.39 C
ATOM 19 N4 C B2017 -58.004 112.463 188.359 1.00 0.39 N
ATOM 20 C5 C B2017 -56.942 110.703 187.161 1.00 0.39 C
ATOM 21 C6 C B2017 -56.991 109.452 186.675 1.00 0.39 C
ATOM 22 P U B2018 -59.088 107.881 181.566 1.00 0.01 P
ATOM 23 OP1 U B2018 -58.905 107.012 180.401 1.00 0.01 O
ATOM 24 OP2 U B2018 -58.162 109.021 181.749 1.00 0.01 O
ATOM 25 O5' U B2018 -60.574 108.401 181.634 1.00 0.01 O
TER
Atoms:
C4: (-55.202,108.519,179.729)
N3: (-54.566,107.682,180.607)
OP1: (-58.983,106.064,175.960)
OP2: (-57.330,104.810,174.450)
C2: (-54.728,106.317,180.741)
C1': (-55.915,104.381,179.838)
C3': (-57.345,102.609,179.412)
O5': (-57.471,104.291,176.910)
O4': (-55.460,103.811,178.632)
C5': (-56.933,102.979,176.943)
P: (-58.243,104.824,175.630)
C4': (-56.331,102.697,178.277)
C2': (-57.383,104.054,179.881)
O2': (-57.938,104.263,181.153)
N1: (-55.642,105.790,179.816)
O4: (-54.943,109.704,179.793)
O2: (-54.100,105.683,181.603)
C6: (-56.310,106.569,178.906)
C5: (-56.120,107.892,178.833)
O3': (-56.832,101.774,180.459)
N3: (-54.566,107.682,180.607)
OP1: (-58.983,106.064,175.960)
OP2: (-57.330,104.810,174.450)
C2: (-54.728,106.317,180.741)
C1': (-55.915,104.381,179.838)
C3': (-57.345,102.609,179.412)
O5': (-57.471,104.291,176.910)
O4': (-55.460,103.811,178.632)
C5': (-56.933,102.979,176.943)
P: (-58.243,104.824,175.630)
C4': (-56.331,102.697,178.277)
C2': (-57.383,104.054,179.881)
O2': (-57.938,104.263,181.153)
N1: (-55.642,105.790,179.816)
O4: (-54.943,109.704,179.793)
O2: (-54.100,105.683,181.603)
C6: (-56.310,106.569,178.906)
C5: (-56.120,107.892,178.833)
O3': (-56.832,101.774,180.459)
C2: (-59.199,109.173,187.559)
OP1: (-53.294,108.869,182.889)
OP2: (-53.765,110.394,184.865)
C4: (-58.064,111.210,187.876)
O5': (-55.443,108.644,184.195)
C3': (-58.384,107.443,184.034)
C1': (-58.103,107.291,186.334)
O4': (-56.857,107.032,185.738)
C5': (-55.850,107.435,183.600)
P: (-53.914,109.072,184.213)
O2: (-60.182,108.416,187.696)
C4': (-57.023,106.835,184.324)
C2': (-59.157,107.080,185.276)
O2': (-59.481,105.713,185.267)
N1: (-58.096,108.676,186.851)
N3: (-59.155,110.444,188.059)
N4: (-58.004,112.463,188.359)
C6: (-56.991,109.452,186.675)
C5: (-56.942,110.703,187.161)
O3': (-58.972,106.949,182.855)
OP1: (-53.294,108.869,182.889)
OP2: (-53.765,110.394,184.865)
C4: (-58.064,111.210,187.876)
O5': (-55.443,108.644,184.195)
C3': (-58.384,107.443,184.034)
C1': (-58.103,107.291,186.334)
O4': (-56.857,107.032,185.738)
C5': (-55.850,107.435,183.600)
P: (-53.914,109.072,184.213)
O2: (-60.182,108.416,187.696)
C4': (-57.023,106.835,184.324)
C2': (-59.157,107.080,185.276)
O2': (-59.481,105.713,185.267)
N1: (-58.096,108.676,186.851)
N3: (-59.155,110.444,188.059)
N4: (-58.004,112.463,188.359)
C6: (-56.991,109.452,186.675)
C5: (-56.942,110.703,187.161)
O3': (-58.972,106.949,182.855)
Image (generated by PyMOL):