Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1XMQ:A1212:A1209
Extra
PDB:
ATOM 1 O3' U A1211 247.279 134.407 -14.737 1.00 62.90 O
ATOM 2 P G A1212 248.080 134.474 -13.346 1.00 60.92 P
ATOM 3 OP1 G A1212 247.045 134.659 -12.288 1.00 55.84 O
ATOM 4 OP2 G A1212 249.173 135.481 -13.492 1.00 55.84 O
ATOM 5 O5' G A1212 248.720 133.024 -13.159 1.00 60.92 O
ATOM 6 C5' G A1212 247.893 131.846 -13.100 1.00 60.92 C
ATOM 7 C4' G A1212 248.707 130.666 -12.636 1.00 60.92 C
ATOM 8 O4' G A1212 249.729 130.375 -13.617 1.00 60.92 O
ATOM 9 C3' G A1212 249.463 130.910 -11.346 1.00 60.92 C
ATOM 10 O3' G A1212 248.666 130.582 -10.228 1.00 60.92 O
ATOM 11 C2' G A1212 250.656 129.979 -11.467 1.00 60.92 C
ATOM 12 O2' G A1212 250.317 128.665 -11.090 1.00 60.92 O
ATOM 13 C1' G A1212 250.939 130.035 -12.967 1.00 60.92 C
ATOM 14 N9 G A1212 251.954 131.022 -13.346 1.00 55.84 N
ATOM 15 C8 G A1212 251.741 132.239 -13.950 1.00 55.84 C
ATOM 16 N7 G A1212 252.844 132.883 -14.210 1.00 55.84 N
ATOM 17 C5 G A1212 253.850 132.049 -13.743 1.00 55.84 C
ATOM 18 C6 G A1212 255.259 132.208 -13.761 1.00 55.84 C
ATOM 19 O6 G A1212 255.923 133.148 -14.222 1.00 55.84 O
ATOM 20 N1 G A1212 255.904 131.124 -13.173 1.00 55.84 N
ATOM 21 C2 G A1212 255.277 130.028 -12.645 1.00 55.84 C
ATOM 22 N2 G A1212 256.064 129.092 -12.122 1.00 55.84 N
ATOM 23 N3 G A1212 253.971 129.862 -12.629 1.00 55.84 N
ATOM 24 C4 G A1212 253.320 130.903 -13.192 1.00 55.84 C
ATOM 25 P C A1213 249.104 131.078 -8.770 1.00 60.67 P
ATOM 26 OP1 C A1213 248.009 130.718 -7.822 1.00 50.72 O
ATOM 27 OP2 C A1213 249.519 132.503 -8.908 1.00 50.72 O
ATOM 28 O5' C A1213 250.387 130.201 -8.427 1.00 60.67 O
TER
ATOM 1 O3' C B1208 248.738 120.310 -14.290 1.00 58.53 O
ATOM 2 P A B1209 248.673 120.499 -15.887 1.00 45.68 P
ATOM 3 OP1 A B1209 247.315 120.145 -16.351 1.00 74.42 O
ATOM 4 OP2 A B1209 249.845 119.794 -16.472 1.00 74.42 O
ATOM 5 O5' A B1209 248.890 122.058 -16.095 1.00 45.68 O
ATOM 6 C5' A B1209 247.798 122.936 -15.990 1.00 45.68 C
ATOM 7 C4' A B1209 248.175 124.182 -15.236 1.00 45.68 C
ATOM 8 O4' A B1209 248.790 123.877 -13.953 1.00 45.68 O
ATOM 9 C3' A B1209 249.149 125.161 -15.858 1.00 45.68 C
ATOM 10 O3' A B1209 248.528 125.968 -16.826 1.00 45.68 O
ATOM 11 C2' A B1209 249.490 126.027 -14.655 1.00 45.68 C
ATOM 12 O2' A B1209 248.404 126.892 -14.371 1.00 45.68 O
ATOM 13 C1' A B1209 249.568 124.992 -13.536 1.00 45.68 C
ATOM 14 N9 A B1209 250.961 124.589 -13.338 1.00 74.42 N
ATOM 15 C8 A B1209 251.599 123.412 -13.637 1.00 74.42 C
ATOM 16 N7 A B1209 252.882 123.424 -13.362 1.00 74.42 N
ATOM 17 C5 A B1209 253.100 124.691 -12.838 1.00 74.42 C
ATOM 18 C6 A B1209 254.254 125.340 -12.359 1.00 74.42 C
ATOM 19 N6 A B1209 255.465 124.786 -12.337 1.00 74.42 N
ATOM 20 N1 A B1209 254.120 126.600 -11.900 1.00 74.42 N
ATOM 21 C2 A B1209 252.912 127.166 -11.931 1.00 74.42 C
ATOM 22 N3 A B1209 251.759 126.667 -12.362 1.00 74.42 N
ATOM 23 C4 A B1209 251.923 125.412 -12.807 1.00 74.42 C
ATOM 24 P A B1210 249.433 126.779 -17.862 1.00 52.99 P
ATOM 25 OP1 A B1210 248.516 127.569 -18.723 1.00 51.71 O
ATOM 26 OP2 A B1210 250.392 125.811 -18.474 1.00 51.71 O
ATOM 27 O5' A B1210 250.282 127.796 -16.975 1.00 52.99 O
TER
ATOM 2 P G A1212 248.080 134.474 -13.346 1.00 60.92 P
ATOM 3 OP1 G A1212 247.045 134.659 -12.288 1.00 55.84 O
ATOM 4 OP2 G A1212 249.173 135.481 -13.492 1.00 55.84 O
ATOM 5 O5' G A1212 248.720 133.024 -13.159 1.00 60.92 O
ATOM 6 C5' G A1212 247.893 131.846 -13.100 1.00 60.92 C
ATOM 7 C4' G A1212 248.707 130.666 -12.636 1.00 60.92 C
ATOM 8 O4' G A1212 249.729 130.375 -13.617 1.00 60.92 O
ATOM 9 C3' G A1212 249.463 130.910 -11.346 1.00 60.92 C
ATOM 10 O3' G A1212 248.666 130.582 -10.228 1.00 60.92 O
ATOM 11 C2' G A1212 250.656 129.979 -11.467 1.00 60.92 C
ATOM 12 O2' G A1212 250.317 128.665 -11.090 1.00 60.92 O
ATOM 13 C1' G A1212 250.939 130.035 -12.967 1.00 60.92 C
ATOM 14 N9 G A1212 251.954 131.022 -13.346 1.00 55.84 N
ATOM 15 C8 G A1212 251.741 132.239 -13.950 1.00 55.84 C
ATOM 16 N7 G A1212 252.844 132.883 -14.210 1.00 55.84 N
ATOM 17 C5 G A1212 253.850 132.049 -13.743 1.00 55.84 C
ATOM 18 C6 G A1212 255.259 132.208 -13.761 1.00 55.84 C
ATOM 19 O6 G A1212 255.923 133.148 -14.222 1.00 55.84 O
ATOM 20 N1 G A1212 255.904 131.124 -13.173 1.00 55.84 N
ATOM 21 C2 G A1212 255.277 130.028 -12.645 1.00 55.84 C
ATOM 22 N2 G A1212 256.064 129.092 -12.122 1.00 55.84 N
ATOM 23 N3 G A1212 253.971 129.862 -12.629 1.00 55.84 N
ATOM 24 C4 G A1212 253.320 130.903 -13.192 1.00 55.84 C
ATOM 25 P C A1213 249.104 131.078 -8.770 1.00 60.67 P
ATOM 26 OP1 C A1213 248.009 130.718 -7.822 1.00 50.72 O
ATOM 27 OP2 C A1213 249.519 132.503 -8.908 1.00 50.72 O
ATOM 28 O5' C A1213 250.387 130.201 -8.427 1.00 60.67 O
TER
ATOM 1 O3' C B1208 248.738 120.310 -14.290 1.00 58.53 O
ATOM 2 P A B1209 248.673 120.499 -15.887 1.00 45.68 P
ATOM 3 OP1 A B1209 247.315 120.145 -16.351 1.00 74.42 O
ATOM 4 OP2 A B1209 249.845 119.794 -16.472 1.00 74.42 O
ATOM 5 O5' A B1209 248.890 122.058 -16.095 1.00 45.68 O
ATOM 6 C5' A B1209 247.798 122.936 -15.990 1.00 45.68 C
ATOM 7 C4' A B1209 248.175 124.182 -15.236 1.00 45.68 C
ATOM 8 O4' A B1209 248.790 123.877 -13.953 1.00 45.68 O
ATOM 9 C3' A B1209 249.149 125.161 -15.858 1.00 45.68 C
ATOM 10 O3' A B1209 248.528 125.968 -16.826 1.00 45.68 O
ATOM 11 C2' A B1209 249.490 126.027 -14.655 1.00 45.68 C
ATOM 12 O2' A B1209 248.404 126.892 -14.371 1.00 45.68 O
ATOM 13 C1' A B1209 249.568 124.992 -13.536 1.00 45.68 C
ATOM 14 N9 A B1209 250.961 124.589 -13.338 1.00 74.42 N
ATOM 15 C8 A B1209 251.599 123.412 -13.637 1.00 74.42 C
ATOM 16 N7 A B1209 252.882 123.424 -13.362 1.00 74.42 N
ATOM 17 C5 A B1209 253.100 124.691 -12.838 1.00 74.42 C
ATOM 18 C6 A B1209 254.254 125.340 -12.359 1.00 74.42 C
ATOM 19 N6 A B1209 255.465 124.786 -12.337 1.00 74.42 N
ATOM 20 N1 A B1209 254.120 126.600 -11.900 1.00 74.42 N
ATOM 21 C2 A B1209 252.912 127.166 -11.931 1.00 74.42 C
ATOM 22 N3 A B1209 251.759 126.667 -12.362 1.00 74.42 N
ATOM 23 C4 A B1209 251.923 125.412 -12.807 1.00 74.42 C
ATOM 24 P A B1210 249.433 126.779 -17.862 1.00 52.99 P
ATOM 25 OP1 A B1210 248.516 127.569 -18.723 1.00 51.71 O
ATOM 26 OP2 A B1210 250.392 125.811 -18.474 1.00 51.71 O
ATOM 27 O5' A B1210 250.282 127.796 -16.975 1.00 52.99 O
TER
Atoms:
OP1: (247.045,134.659,-12.288)
OP2: (249.173,135.481,-13.492)
C3': (249.463,130.910,-11.346)
C1': (250.939,130.035,-12.967)
C5': (247.893,131.846,-13.100)
O6: (255.923,133.148,-14.222)
O4': (249.729,130.375,-13.617)
C8: (251.741,132.239,-13.950)
C2: (255.277,130.028,-12.645)
C6: (255.259,132.208,-13.761)
C5: (253.850,132.049,-13.743)
C4: (253.320,130.903,-13.192)
P: (248.080,134.474,-13.346)
C4': (248.707,130.666,-12.636)
C2': (250.656,129.979,-11.467)
O2': (250.317,128.665,-11.090)
N1: (255.904,131.124,-13.173)
N2: (256.064,129.092,-12.122)
N3: (253.971,129.862,-12.629)
N7: (252.844,132.883,-14.210)
N9: (251.954,131.022,-13.346)
O5': (248.720,133.024,-13.159)
O3': (248.666,130.582,-10.228)
OP2: (249.173,135.481,-13.492)
C3': (249.463,130.910,-11.346)
C1': (250.939,130.035,-12.967)
C5': (247.893,131.846,-13.100)
O6: (255.923,133.148,-14.222)
O4': (249.729,130.375,-13.617)
C8: (251.741,132.239,-13.950)
C2: (255.277,130.028,-12.645)
C6: (255.259,132.208,-13.761)
C5: (253.850,132.049,-13.743)
C4: (253.320,130.903,-13.192)
P: (248.080,134.474,-13.346)
C4': (248.707,130.666,-12.636)
C2': (250.656,129.979,-11.467)
O2': (250.317,128.665,-11.090)
N1: (255.904,131.124,-13.173)
N2: (256.064,129.092,-12.122)
N3: (253.971,129.862,-12.629)
N7: (252.844,132.883,-14.210)
N9: (251.954,131.022,-13.346)
O5': (248.720,133.024,-13.159)
O3': (248.666,130.582,-10.228)
OP1: (247.315,120.145,-16.351)
OP2: (249.845,119.794,-16.472)
C3': (249.149,125.161,-15.858)
C1': (249.568,124.992,-13.536)
C5': (247.798,122.936,-15.990)
O4': (248.790,123.877,-13.953)
C8: (251.599,123.412,-13.637)
O2': (248.404,126.892,-14.371)
C6: (254.254,125.340,-12.359)
C5: (253.100,124.691,-12.838)
C4: (251.923,125.412,-12.807)
P: (248.673,120.499,-15.887)
C4': (248.175,124.182,-15.236)
C2': (249.490,126.027,-14.655)
C2: (252.912,127.166,-11.931)
N1: (254.120,126.600,-11.900)
N3: (251.759,126.667,-12.362)
N6: (255.465,124.786,-12.337)
N7: (252.882,123.424,-13.362)
N9: (250.961,124.589,-13.338)
O5': (248.890,122.058,-16.095)
O3': (248.528,125.968,-16.826)
OP2: (249.845,119.794,-16.472)
C3': (249.149,125.161,-15.858)
C1': (249.568,124.992,-13.536)
C5': (247.798,122.936,-15.990)
O4': (248.790,123.877,-13.953)
C8: (251.599,123.412,-13.637)
O2': (248.404,126.892,-14.371)
C6: (254.254,125.340,-12.359)
C5: (253.100,124.691,-12.838)
C4: (251.923,125.412,-12.807)
P: (248.673,120.499,-15.887)
C4': (248.175,124.182,-15.236)
C2': (249.490,126.027,-14.655)
C2: (252.912,127.166,-11.931)
N1: (254.120,126.600,-11.900)
N3: (251.759,126.667,-12.362)
N6: (255.465,124.786,-12.337)
N7: (252.882,123.424,-13.362)
N9: (250.961,124.589,-13.338)
O5': (248.890,122.058,-16.095)
O3': (248.528,125.968,-16.826)
Image (generated by PyMOL):