Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1H:A1006:A1019
Extra
PDB:
ATOM 1 O3' C A1005 -120.703 -88.956 9.557 1.00 53.76 O
ATOM 2 P G A1006 -120.692 -89.530 11.066 1.00 99.58 P
ATOM 3 OP1 G A1006 -122.106 -89.881 11.319 1.00102.64 O
ATOM 4 OP2 G A1006 -119.965 -88.617 11.998 1.00 71.59 O
ATOM 5 O5' G A1006 -119.879 -90.913 10.984 1.00 86.32 O
ATOM 6 C5' G A1006 -120.204 -91.921 10.025 1.00 71.84 C
ATOM 7 C4' G A1006 -119.153 -93.016 10.037 1.00 81.19 C
ATOM 8 O4' G A1006 -117.915 -92.608 9.403 1.00 84.02 O
ATOM 9 C3' G A1006 -118.666 -93.397 11.418 1.00 76.71 C
ATOM 10 O3' G A1006 -119.601 -94.192 12.057 1.00 82.04 O
ATOM 11 C2' G A1006 -117.479 -94.253 11.031 1.00 82.60 C
ATOM 12 O2' G A1006 -117.887 -95.477 10.452 1.00 82.59 O
ATOM 13 C1' G A1006 -116.842 -93.321 10.006 1.00 81.94 C
ATOM 14 N9 G A1006 -115.884 -92.427 10.666 1.00 87.54 N
ATOM 15 C8 G A1006 -115.956 -91.064 10.861 1.00 92.46 C
ATOM 16 N7 G A1006 -114.934 -90.555 11.505 1.00 78.51 N
ATOM 17 C5 G A1006 -114.131 -91.658 11.766 1.00 81.24 C
ATOM 18 C6 G A1006 -112.893 -91.745 12.437 1.00 73.98 C
ATOM 19 O6 G A1006 -112.242 -90.833 12.947 1.00 77.14 O
ATOM 20 N1 G A1006 -112.402 -93.041 12.485 1.00 67.44 N
ATOM 21 C2 G A1006 -113.047 -94.121 11.946 1.00 72.54 C
ATOM 22 N2 G A1006 -112.433 -95.301 12.085 1.00 86.89 N
ATOM 23 N3 G A1006 -114.212 -94.068 11.315 1.00 78.29 N
ATOM 24 C4 G A1006 -114.697 -92.807 11.260 1.00 85.14 C
ATOM 25 P A A1007 -119.799 -93.994 13.623 1.00 52.54 P
ATOM 26 OP1 A A1007 -120.833 -94.983 14.035 1.00 65.65 O
ATOM 27 OP2 A A1007 -119.984 -92.542 13.869 1.00 51.54 O
ATOM 28 O5' A A1007 -118.409 -94.474 14.232 1.00 55.32 O
TER
ATOM 1 O3' U B1018 -122.658-103.079 7.664 1.00 68.23 O
ATOM 2 P A B1019 -122.451-101.742 6.794 1.00 79.54 P
ATOM 3 OP1 A B1019 -123.770-101.093 6.553 1.00 67.43 O
ATOM 4 OP2 A B1019 -121.590-102.127 5.655 1.00 76.09 O
ATOM 5 O5' A B1019 -121.607-100.778 7.748 1.00 66.59 O
ATOM 6 C5' A B1019 -122.284-100.169 8.825 1.00 66.29 C
ATOM 7 C4' A B1019 -121.509 -98.968 9.323 1.00 75.82 C
ATOM 8 O4' A B1019 -120.243 -99.405 9.863 1.00 80.43 O
ATOM 9 C3' A B1019 -121.138 -97.969 8.244 1.00 72.49 C
ATOM 10 O3' A B1019 -122.222 -97.080 8.028 1.00 67.51 O
ATOM 11 C2' A B1019 -119.944 -97.263 8.878 1.00 72.30 C
ATOM 12 O2' A B1019 -120.342 -96.241 9.764 1.00 67.37 O
ATOM 13 C1' A B1019 -119.281 -98.379 9.681 1.00 71.60 C
ATOM 14 N9 A B1019 -118.091 -98.980 9.072 1.00 68.15 N
ATOM 15 C8 A B1019 -118.022-100.195 8.438 1.00 69.48 C
ATOM 16 N7 A B1019 -116.823-100.496 7.995 1.00 64.73 N
ATOM 17 C5 A B1019 -116.049 -99.409 8.365 1.00 62.58 C
ATOM 18 C6 A B1019 -114.687 -99.123 8.189 1.00 56.17 C
ATOM 19 N6 A B1019 -113.842 -99.951 7.566 1.00 55.42 N
ATOM 20 N1 A B1019 -114.236 -97.955 8.686 1.00 60.25 N
ATOM 21 C2 A B1019 -115.087 -97.139 9.314 1.00 63.83 C
ATOM 22 N3 A B1019 -116.387 -97.300 9.539 1.00 60.89 N
ATOM 23 C4 A B1019 -116.810 -98.465 9.033 1.00 64.60 C
ATOM 24 P A B1020 -122.766 -96.878 6.534 1.00 85.23 P
ATOM 25 OP1 A B1020 -124.131 -96.308 6.641 1.00100.04 O
ATOM 26 OP2 A B1020 -122.511 -98.120 5.765 1.00 74.81 O
ATOM 27 O5' A B1020 -121.797 -95.763 5.926 1.00 97.19 O
TER
ATOM 2 P G A1006 -120.692 -89.530 11.066 1.00 99.58 P
ATOM 3 OP1 G A1006 -122.106 -89.881 11.319 1.00102.64 O
ATOM 4 OP2 G A1006 -119.965 -88.617 11.998 1.00 71.59 O
ATOM 5 O5' G A1006 -119.879 -90.913 10.984 1.00 86.32 O
ATOM 6 C5' G A1006 -120.204 -91.921 10.025 1.00 71.84 C
ATOM 7 C4' G A1006 -119.153 -93.016 10.037 1.00 81.19 C
ATOM 8 O4' G A1006 -117.915 -92.608 9.403 1.00 84.02 O
ATOM 9 C3' G A1006 -118.666 -93.397 11.418 1.00 76.71 C
ATOM 10 O3' G A1006 -119.601 -94.192 12.057 1.00 82.04 O
ATOM 11 C2' G A1006 -117.479 -94.253 11.031 1.00 82.60 C
ATOM 12 O2' G A1006 -117.887 -95.477 10.452 1.00 82.59 O
ATOM 13 C1' G A1006 -116.842 -93.321 10.006 1.00 81.94 C
ATOM 14 N9 G A1006 -115.884 -92.427 10.666 1.00 87.54 N
ATOM 15 C8 G A1006 -115.956 -91.064 10.861 1.00 92.46 C
ATOM 16 N7 G A1006 -114.934 -90.555 11.505 1.00 78.51 N
ATOM 17 C5 G A1006 -114.131 -91.658 11.766 1.00 81.24 C
ATOM 18 C6 G A1006 -112.893 -91.745 12.437 1.00 73.98 C
ATOM 19 O6 G A1006 -112.242 -90.833 12.947 1.00 77.14 O
ATOM 20 N1 G A1006 -112.402 -93.041 12.485 1.00 67.44 N
ATOM 21 C2 G A1006 -113.047 -94.121 11.946 1.00 72.54 C
ATOM 22 N2 G A1006 -112.433 -95.301 12.085 1.00 86.89 N
ATOM 23 N3 G A1006 -114.212 -94.068 11.315 1.00 78.29 N
ATOM 24 C4 G A1006 -114.697 -92.807 11.260 1.00 85.14 C
ATOM 25 P A A1007 -119.799 -93.994 13.623 1.00 52.54 P
ATOM 26 OP1 A A1007 -120.833 -94.983 14.035 1.00 65.65 O
ATOM 27 OP2 A A1007 -119.984 -92.542 13.869 1.00 51.54 O
ATOM 28 O5' A A1007 -118.409 -94.474 14.232 1.00 55.32 O
TER
ATOM 1 O3' U B1018 -122.658-103.079 7.664 1.00 68.23 O
ATOM 2 P A B1019 -122.451-101.742 6.794 1.00 79.54 P
ATOM 3 OP1 A B1019 -123.770-101.093 6.553 1.00 67.43 O
ATOM 4 OP2 A B1019 -121.590-102.127 5.655 1.00 76.09 O
ATOM 5 O5' A B1019 -121.607-100.778 7.748 1.00 66.59 O
ATOM 6 C5' A B1019 -122.284-100.169 8.825 1.00 66.29 C
ATOM 7 C4' A B1019 -121.509 -98.968 9.323 1.00 75.82 C
ATOM 8 O4' A B1019 -120.243 -99.405 9.863 1.00 80.43 O
ATOM 9 C3' A B1019 -121.138 -97.969 8.244 1.00 72.49 C
ATOM 10 O3' A B1019 -122.222 -97.080 8.028 1.00 67.51 O
ATOM 11 C2' A B1019 -119.944 -97.263 8.878 1.00 72.30 C
ATOM 12 O2' A B1019 -120.342 -96.241 9.764 1.00 67.37 O
ATOM 13 C1' A B1019 -119.281 -98.379 9.681 1.00 71.60 C
ATOM 14 N9 A B1019 -118.091 -98.980 9.072 1.00 68.15 N
ATOM 15 C8 A B1019 -118.022-100.195 8.438 1.00 69.48 C
ATOM 16 N7 A B1019 -116.823-100.496 7.995 1.00 64.73 N
ATOM 17 C5 A B1019 -116.049 -99.409 8.365 1.00 62.58 C
ATOM 18 C6 A B1019 -114.687 -99.123 8.189 1.00 56.17 C
ATOM 19 N6 A B1019 -113.842 -99.951 7.566 1.00 55.42 N
ATOM 20 N1 A B1019 -114.236 -97.955 8.686 1.00 60.25 N
ATOM 21 C2 A B1019 -115.087 -97.139 9.314 1.00 63.83 C
ATOM 22 N3 A B1019 -116.387 -97.300 9.539 1.00 60.89 N
ATOM 23 C4 A B1019 -116.810 -98.465 9.033 1.00 64.60 C
ATOM 24 P A B1020 -122.766 -96.878 6.534 1.00 85.23 P
ATOM 25 OP1 A B1020 -124.131 -96.308 6.641 1.00100.04 O
ATOM 26 OP2 A B1020 -122.511 -98.120 5.765 1.00 74.81 O
ATOM 27 O5' A B1020 -121.797 -95.763 5.926 1.00 97.19 O
TER
Atoms:
OP1: (-122.106,-89.881,11.319)
OP2: (-119.965,-88.617,11.998)
C3': (-118.666,-93.397,11.418)
C1': (-116.842,-93.321,10.006)
C5': (-120.204,-91.921,10.025)
O6: (-112.242,-90.833,12.947)
O4': (-117.915,-92.608,9.403)
C8: (-115.956,-91.064,10.861)
C2: (-113.047,-94.121,11.946)
C6: (-112.893,-91.745,12.437)
C5: (-114.131,-91.658,11.766)
C4: (-114.697,-92.807,11.260)
P: (-120.692,-89.530,11.066)
C4': (-119.153,-93.016,10.037)
C2': (-117.479,-94.253,11.031)
O2': (-117.887,-95.477,10.452)
N1: (-112.402,-93.041,12.485)
N2: (-112.433,-95.301,12.085)
N3: (-114.212,-94.068,11.315)
N7: (-114.934,-90.555,11.505)
N9: (-115.884,-92.427,10.666)
O5': (-119.879,-90.913,10.984)
O3': (-119.601,-94.192,12.057)
OP2: (-119.965,-88.617,11.998)
C3': (-118.666,-93.397,11.418)
C1': (-116.842,-93.321,10.006)
C5': (-120.204,-91.921,10.025)
O6: (-112.242,-90.833,12.947)
O4': (-117.915,-92.608,9.403)
C8: (-115.956,-91.064,10.861)
C2: (-113.047,-94.121,11.946)
C6: (-112.893,-91.745,12.437)
C5: (-114.131,-91.658,11.766)
C4: (-114.697,-92.807,11.260)
P: (-120.692,-89.530,11.066)
C4': (-119.153,-93.016,10.037)
C2': (-117.479,-94.253,11.031)
O2': (-117.887,-95.477,10.452)
N1: (-112.402,-93.041,12.485)
N2: (-112.433,-95.301,12.085)
N3: (-114.212,-94.068,11.315)
N7: (-114.934,-90.555,11.505)
N9: (-115.884,-92.427,10.666)
O5': (-119.879,-90.913,10.984)
O3': (-119.601,-94.192,12.057)
OP1: (-123.770,-101.093,6.553)
OP2: (-121.590,-102.127,5.655)
C3': (-121.138,-97.969,8.244)
C1': (-119.281,-98.379,9.681)
C5': (-122.284,-100.169,8.825)
O4': (-120.243,-99.405,9.863)
C8: (-118.022,-100.195,8.438)
O2': (-120.342,-96.241,9.764)
C6: (-114.687,-99.123,8.189)
C5: (-116.049,-99.409,8.365)
C4: (-116.810,-98.465,9.033)
P: (-122.451,-101.742,6.794)
C4': (-121.509,-98.968,9.323)
C2': (-119.944,-97.263,8.878)
C2: (-115.087,-97.139,9.314)
N1: (-114.236,-97.955,8.686)
N3: (-116.387,-97.300,9.539)
N6: (-113.842,-99.951,7.566)
N7: (-116.823,-100.496,7.995)
N9: (-118.091,-98.980,9.072)
O5': (-121.607,-100.778,7.748)
O3': (-122.222,-97.080,8.028)
OP2: (-121.590,-102.127,5.655)
C3': (-121.138,-97.969,8.244)
C1': (-119.281,-98.379,9.681)
C5': (-122.284,-100.169,8.825)
O4': (-120.243,-99.405,9.863)
C8: (-118.022,-100.195,8.438)
O2': (-120.342,-96.241,9.764)
C6: (-114.687,-99.123,8.189)
C5: (-116.049,-99.409,8.365)
C4: (-116.810,-98.465,9.033)
P: (-122.451,-101.742,6.794)
C4': (-121.509,-98.968,9.323)
C2': (-119.944,-97.263,8.878)
C2: (-115.087,-97.139,9.314)
N1: (-114.236,-97.955,8.686)
N3: (-116.387,-97.300,9.539)
N6: (-113.842,-99.951,7.566)
N7: (-116.823,-100.496,7.995)
N9: (-118.091,-98.980,9.072)
O5': (-121.607,-100.778,7.748)
O3': (-122.222,-97.080,8.028)
Image (generated by PyMOL):