ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHJ:A24:A1162

Extra

PDB:
ATOM 1 O3' U A 23 66.835 -95.177 -37.489 1.00 28.44 O
ATOM 2 P G A 24 66.551 -94.682 -38.983 1.00 24.03 P
ATOM 3 OP1 G A 24 67.854 -94.469 -39.630 1.00 40.02 O
ATOM 4 OP2 G A 24 65.611 -93.548 -38.901 1.00 36.26 O
ATOM 5 O5' G A 24 65.848 -95.941 -39.625 1.00 27.22 O
ATOM 6 C5' G A 24 66.392 -97.231 -39.433 1.00 35.24 C
ATOM 7 C4' G A 24 65.405 -98.312 -39.779 1.00 38.53 C
ATOM 8 O4' G A 24 64.488 -98.523 -38.681 1.00 33.76 O
ATOM 9 C3' G A 24 64.505 -98.031 -40.954 1.00 33.67 C
ATOM 10 O3' G A 24 65.153 -98.250 -42.184 1.00 35.47 O
ATOM 11 C2' G A 24 63.361 -98.982 -40.692 1.00 33.10 C
ATOM 12 O2' G A 24 63.759-100.308 -40.982 1.00 34.64 O
ATOM 13 C1' G A 24 63.223 -98.861 -39.180 1.00 31.12 C
ATOM 14 N9 G A 24 62.265 -97.813 -38.776 1.00 29.96 N
ATOM 15 C8 G A 24 62.587 -96.525 -38.486 1.00 31.77 C
ATOM 16 N7 G A 24 61.561 -95.802 -38.150 1.00 39.51 N
ATOM 17 C5 G A 24 60.477 -96.661 -38.208 1.00 37.10 C
ATOM 18 C6 G A 24 59.100 -96.422 -37.944 1.00 35.08 C
ATOM 19 O6 G A 24 58.551 -95.381 -37.609 1.00 42.83 O
ATOM 20 N1 G A 24 58.334 -97.544 -38.131 1.00 31.58 N
ATOM 21 C2 G A 24 58.846 -98.751 -38.522 1.00 34.88 C
ATOM 22 N2 G A 24 57.976 -99.748 -38.649 1.00 37.73 N
ATOM 23 N3 G A 24 60.118 -99.000 -38.762 1.00 35.26 N
ATOM 24 C4 G A 24 60.896 -97.912 -38.593 1.00 35.21 C
ATOM 25 P C A 25 64.626 -97.538 -43.508 1.00 32.85 P
ATOM 26 OP1 C A 25 65.437 -98.061 -44.640 1.00 46.43 O
ATOM 27 OP2 C A 25 64.605 -96.075 -43.257 1.00 30.72 O
ATOM 28 O5' C A 25 63.153 -98.090 -43.609 1.00 37.70 O
TER

ATOM 1 O3' A B1161 66.527-108.479 -43.153 1.00 37.51 O
ATOM 2 P A B1162 67.252-107.957 -41.820 1.00 41.28 P
ATOM 3 OP1 A B1162 68.723-108.055 -42.040 1.00 33.36 O
ATOM 4 OP2 A B1162 66.658-108.693 -40.681 1.00 29.92 O
ATOM 5 O5' A B1162 66.808-106.425 -41.787 1.00 39.59 O
ATOM 6 C5' A B1162 67.261-105.509 -42.774 1.00 29.22 C
ATOM 7 C4' A B1162 66.716-104.126 -42.530 1.00 29.63 C
ATOM 8 O4' A B1162 65.286-104.128 -42.729 1.00 42.34 O
ATOM 9 C3' A B1162 66.890-103.585 -41.129 1.00 28.67 C
ATOM 10 O3' A B1162 68.155-103.004 -40.920 1.00 34.40 O
ATOM 11 C2' A B1162 65.753-102.595 -41.014 1.00 33.74 C
ATOM 12 O2' A B1162 66.057-101.421 -41.728 1.00 40.28 O
ATOM 13 C1' A B1162 64.658-103.324 -41.761 1.00 37.72 C
ATOM 14 N9 A B1162 63.871-104.194 -40.866 1.00 37.11 N
ATOM 15 C8 A B1162 64.044-105.526 -40.640 1.00 32.73 C
ATOM 16 N7 A B1162 63.197-105.994 -39.772 1.00 41.46 N
ATOM 17 C5 A B1162 62.422-104.909 -39.409 1.00 38.89 C
ATOM 18 C6 A B1162 61.344-104.757 -38.540 1.00 40.18 C
ATOM 19 N6 A B1162 60.825-105.740 -37.817 1.00 41.99 N
ATOM 20 N1 A B1162 60.796-103.546 -38.430 1.00 46.49 N
ATOM 21 C2 A B1162 61.314-102.560 -39.148 1.00 45.53 C
ATOM 22 N3 A B1162 62.327-102.576 -39.991 1.00 35.11 N
ATOM 23 C4 A B1162 62.832-103.797 -40.078 1.00 34.98 C
ATOM 24 P G B1163 68.917-103.190 -39.513 1.00 41.61 P
ATOM 25 OP1 G B1163 70.135-102.355 -39.582 1.00 37.39 O
ATOM 26 OP2 G B1163 69.064-104.656 -39.267 1.00 38.24 O
ATOM 27 O5' G B1163 67.888-102.566 -38.474 1.00 29.84 O
TER

Atoms:
OP1: (67.854,-94.469,-39.630)
OP2: (65.611,-93.548,-38.901)
C3': (64.505,-98.031,-40.954)
C1': (63.223,-98.861,-39.180)
C5': (66.392,-97.231,-39.433)
O6: (58.551,-95.381,-37.609)
O4': (64.488,-98.523,-38.681)
C8: (62.587,-96.525,-38.486)
C2: (58.846,-98.751,-38.522)
C6: (59.100,-96.422,-37.944)
C5: (60.477,-96.661,-38.208)
C4: (60.896,-97.912,-38.593)
P: (66.551,-94.682,-38.983)
C4': (65.405,-98.312,-39.779)
C2': (63.361,-98.982,-40.692)
O2': (63.759,-100.308,-40.982)
N1: (58.334,-97.544,-38.131)
N2: (57.976,-99.748,-38.649)
N3: (60.118,-99.000,-38.762)
N7: (61.561,-95.802,-38.150)
N9: (62.265,-97.813,-38.776)
O5': (65.848,-95.941,-39.625)
O3': (65.153,-98.250,-42.184)
OP1: (68.723,-108.055,-42.040)
OP2: (66.658,-108.693,-40.681)
C3': (66.890,-103.585,-41.129)
C1': (64.658,-103.324,-41.761)
C5': (67.261,-105.509,-42.774)
O4': (65.286,-104.128,-42.729)
C8: (64.044,-105.526,-40.640)
O2': (66.057,-101.421,-41.728)
C6: (61.344,-104.757,-38.540)
C5: (62.422,-104.909,-39.409)
C4: (62.832,-103.797,-40.078)
P: (67.252,-107.957,-41.820)
C4': (66.716,-104.126,-42.530)
C2': (65.753,-102.595,-41.014)
C2: (61.314,-102.560,-39.148)
N1: (60.796,-103.546,-38.430)
N3: (62.327,-102.576,-39.991)
N6: (60.825,-105.740,-37.817)
N7: (63.197,-105.994,-39.772)
N9: (63.871,-104.194,-40.866)
O5': (66.808,-106.425,-41.787)
O3': (68.155,-103.004,-40.920)
Image (generated by PyMOL):
PyMOL image
show in jmol