Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A2538:A2539
Extra
PDB:
ATOM 1 O3' G A2537 -48.899 85.126 167.476 1.00 0.21 O
ATOM 2 P U A2538 -48.211 86.464 166.929 1.00 0.11 P
ATOM 3 OP1 U A2538 -46.766 86.165 166.777 1.00 0.11 O
ATOM 4 OP2 U A2538 -48.623 87.576 167.833 1.00 0.11 O
ATOM 5 O5' U A2538 -48.881 86.671 165.511 1.00 0.11 O
ATOM 6 C5' U A2538 -49.330 85.581 164.740 1.00 0.11 C
ATOM 7 C4' U A2538 -50.449 86.003 163.818 1.00 0.11 C
ATOM 8 O4' U A2538 -51.676 86.169 164.574 1.00 0.11 O
ATOM 9 C3' U A2538 -50.282 87.352 163.127 1.00 0.11 C
ATOM 10 O3' U A2538 -49.400 87.323 162.011 1.00 0.11 O
ATOM 11 C2' U A2538 -51.714 87.713 162.771 1.00 0.11 C
ATOM 12 O2' U A2538 -52.147 87.020 161.612 1.00 0.11 O
ATOM 13 C1' U A2538 -52.469 87.166 163.973 1.00 0.11 C
ATOM 14 N1 U A2538 -52.728 88.197 164.943 1.00 0.34 N
ATOM 15 C2 U A2538 -53.772 89.020 164.604 1.00 0.34 C
ATOM 16 O2 U A2538 -54.414 88.886 163.583 1.00 0.34 O
ATOM 17 N3 U A2538 -54.066 90.011 165.482 1.00 0.34 N
ATOM 18 C4 U A2538 -53.411 90.240 166.655 1.00 0.34 C
ATOM 19 O4 U A2538 -53.823 91.180 167.331 1.00 0.34 O
ATOM 20 C5 U A2538 -52.324 89.341 166.951 1.00 0.34 C
ATOM 21 C6 U A2538 -52.017 88.355 166.095 1.00 0.34 C
ATOM 22 P A A2539 -48.576 88.652 161.579 1.00 4.90 P
ATOM 23 OP1 A A2539 -47.462 88.823 162.545 1.00 4.90 O
ATOM 24 OP2 A A2539 -49.551 89.771 161.416 1.00 4.90 O
ATOM 25 O5' A A2539 -48.007 88.247 160.179 1.00 4.90 O
TER
ATOM 1 O3' U B2538 -49.400 87.323 162.011 1.00 0.11 O
ATOM 2 P A B2539 -48.576 88.652 161.579 1.00 4.90 P
ATOM 3 OP1 A B2539 -47.462 88.823 162.545 1.00 4.90 O
ATOM 4 OP2 A B2539 -49.551 89.771 161.416 1.00 4.90 O
ATOM 5 O5' A B2539 -48.007 88.247 160.179 1.00 4.90 O
ATOM 6 C5' A B2539 -46.806 88.791 159.737 1.00 4.90 C
ATOM 7 C4' A B2539 -45.913 87.731 159.214 1.00 4.90 C
ATOM 8 O4' A B2539 -46.686 86.793 158.439 1.00 4.90 O
ATOM 9 C3' A B2539 -44.847 88.218 158.270 1.00 4.90 C
ATOM 10 O3' A B2539 -43.716 88.678 158.967 1.00 4.90 O
ATOM 11 C2' A B2539 -44.584 87.009 157.373 1.00 4.90 C
ATOM 12 O2' A B2539 -43.704 86.079 158.008 1.00 4.90 O
ATOM 13 C1' A B2539 -45.965 86.383 157.302 1.00 4.90 C
ATOM 14 N9 A B2539 -46.736 86.770 156.113 1.00 4.82 N
ATOM 15 C8 A B2539 -47.821 87.595 156.152 1.00 4.82 C
ATOM 16 N7 A B2539 -48.424 87.727 155.000 1.00 4.82 N
ATOM 17 C5 A B2539 -47.704 86.909 154.157 1.00 4.82 C
ATOM 18 C6 A B2539 -47.873 86.619 152.801 1.00 4.82 C
ATOM 19 N6 A B2539 -48.845 87.127 152.027 1.00 4.82 N
ATOM 20 N1 A B2539 -46.981 85.755 152.273 1.00 4.82 N
ATOM 21 C2 A B2539 -46.019 85.221 153.042 1.00 4.82 C
ATOM 22 N3 A B2539 -45.777 85.416 154.327 1.00 4.82 N
ATOM 23 C4 A B2539 -46.670 86.286 154.831 1.00 4.82 C
ATOM 24 P U B2540 -43.003 90.009 158.494 1.00 0.05 P
ATOM 25 OP1 U B2540 -42.323 90.582 159.685 1.00 0.05 O
ATOM 26 OP2 U B2540 -44.029 90.817 157.783 1.00 0.05 O
ATOM 27 O5' U B2540 -41.920 89.452 157.463 1.00 0.05 O
TER
ATOM 2 P U A2538 -48.211 86.464 166.929 1.00 0.11 P
ATOM 3 OP1 U A2538 -46.766 86.165 166.777 1.00 0.11 O
ATOM 4 OP2 U A2538 -48.623 87.576 167.833 1.00 0.11 O
ATOM 5 O5' U A2538 -48.881 86.671 165.511 1.00 0.11 O
ATOM 6 C5' U A2538 -49.330 85.581 164.740 1.00 0.11 C
ATOM 7 C4' U A2538 -50.449 86.003 163.818 1.00 0.11 C
ATOM 8 O4' U A2538 -51.676 86.169 164.574 1.00 0.11 O
ATOM 9 C3' U A2538 -50.282 87.352 163.127 1.00 0.11 C
ATOM 10 O3' U A2538 -49.400 87.323 162.011 1.00 0.11 O
ATOM 11 C2' U A2538 -51.714 87.713 162.771 1.00 0.11 C
ATOM 12 O2' U A2538 -52.147 87.020 161.612 1.00 0.11 O
ATOM 13 C1' U A2538 -52.469 87.166 163.973 1.00 0.11 C
ATOM 14 N1 U A2538 -52.728 88.197 164.943 1.00 0.34 N
ATOM 15 C2 U A2538 -53.772 89.020 164.604 1.00 0.34 C
ATOM 16 O2 U A2538 -54.414 88.886 163.583 1.00 0.34 O
ATOM 17 N3 U A2538 -54.066 90.011 165.482 1.00 0.34 N
ATOM 18 C4 U A2538 -53.411 90.240 166.655 1.00 0.34 C
ATOM 19 O4 U A2538 -53.823 91.180 167.331 1.00 0.34 O
ATOM 20 C5 U A2538 -52.324 89.341 166.951 1.00 0.34 C
ATOM 21 C6 U A2538 -52.017 88.355 166.095 1.00 0.34 C
ATOM 22 P A A2539 -48.576 88.652 161.579 1.00 4.90 P
ATOM 23 OP1 A A2539 -47.462 88.823 162.545 1.00 4.90 O
ATOM 24 OP2 A A2539 -49.551 89.771 161.416 1.00 4.90 O
ATOM 25 O5' A A2539 -48.007 88.247 160.179 1.00 4.90 O
TER
ATOM 1 O3' U B2538 -49.400 87.323 162.011 1.00 0.11 O
ATOM 2 P A B2539 -48.576 88.652 161.579 1.00 4.90 P
ATOM 3 OP1 A B2539 -47.462 88.823 162.545 1.00 4.90 O
ATOM 4 OP2 A B2539 -49.551 89.771 161.416 1.00 4.90 O
ATOM 5 O5' A B2539 -48.007 88.247 160.179 1.00 4.90 O
ATOM 6 C5' A B2539 -46.806 88.791 159.737 1.00 4.90 C
ATOM 7 C4' A B2539 -45.913 87.731 159.214 1.00 4.90 C
ATOM 8 O4' A B2539 -46.686 86.793 158.439 1.00 4.90 O
ATOM 9 C3' A B2539 -44.847 88.218 158.270 1.00 4.90 C
ATOM 10 O3' A B2539 -43.716 88.678 158.967 1.00 4.90 O
ATOM 11 C2' A B2539 -44.584 87.009 157.373 1.00 4.90 C
ATOM 12 O2' A B2539 -43.704 86.079 158.008 1.00 4.90 O
ATOM 13 C1' A B2539 -45.965 86.383 157.302 1.00 4.90 C
ATOM 14 N9 A B2539 -46.736 86.770 156.113 1.00 4.82 N
ATOM 15 C8 A B2539 -47.821 87.595 156.152 1.00 4.82 C
ATOM 16 N7 A B2539 -48.424 87.727 155.000 1.00 4.82 N
ATOM 17 C5 A B2539 -47.704 86.909 154.157 1.00 4.82 C
ATOM 18 C6 A B2539 -47.873 86.619 152.801 1.00 4.82 C
ATOM 19 N6 A B2539 -48.845 87.127 152.027 1.00 4.82 N
ATOM 20 N1 A B2539 -46.981 85.755 152.273 1.00 4.82 N
ATOM 21 C2 A B2539 -46.019 85.221 153.042 1.00 4.82 C
ATOM 22 N3 A B2539 -45.777 85.416 154.327 1.00 4.82 N
ATOM 23 C4 A B2539 -46.670 86.286 154.831 1.00 4.82 C
ATOM 24 P U B2540 -43.003 90.009 158.494 1.00 0.05 P
ATOM 25 OP1 U B2540 -42.323 90.582 159.685 1.00 0.05 O
ATOM 26 OP2 U B2540 -44.029 90.817 157.783 1.00 0.05 O
ATOM 27 O5' U B2540 -41.920 89.452 157.463 1.00 0.05 O
TER
Atoms:
C4: (-53.411,90.240,166.655)
N3: (-54.066,90.011,165.482)
OP1: (-46.766,86.165,166.777)
OP2: (-48.623,87.576,167.833)
C2: (-53.772,89.020,164.604)
C1': (-52.469,87.166,163.973)
C3': (-50.282,87.352,163.127)
O5': (-48.881,86.671,165.511)
O4': (-51.676,86.169,164.574)
C5': (-49.330,85.581,164.740)
P: (-48.211,86.464,166.929)
C4': (-50.449,86.003,163.818)
C2': (-51.714,87.713,162.771)
O2': (-52.147,87.020,161.612)
N1: (-52.728,88.197,164.943)
O4: (-53.823,91.180,167.331)
O2: (-54.414,88.886,163.583)
C6: (-52.017,88.355,166.095)
C5: (-52.324,89.341,166.951)
O3': (-49.400,87.323,162.011)
N3: (-54.066,90.011,165.482)
OP1: (-46.766,86.165,166.777)
OP2: (-48.623,87.576,167.833)
C2: (-53.772,89.020,164.604)
C1': (-52.469,87.166,163.973)
C3': (-50.282,87.352,163.127)
O5': (-48.881,86.671,165.511)
O4': (-51.676,86.169,164.574)
C5': (-49.330,85.581,164.740)
P: (-48.211,86.464,166.929)
C4': (-50.449,86.003,163.818)
C2': (-51.714,87.713,162.771)
O2': (-52.147,87.020,161.612)
N1: (-52.728,88.197,164.943)
O4: (-53.823,91.180,167.331)
O2: (-54.414,88.886,163.583)
C6: (-52.017,88.355,166.095)
C5: (-52.324,89.341,166.951)
O3': (-49.400,87.323,162.011)
OP1: (-47.462,88.823,162.545)
OP2: (-49.551,89.771,161.416)
C3': (-44.847,88.218,158.270)
C1': (-45.965,86.383,157.302)
C5': (-46.806,88.791,159.737)
O4': (-46.686,86.793,158.439)
C8: (-47.821,87.595,156.152)
O2': (-43.704,86.079,158.008)
C6: (-47.873,86.619,152.801)
C5: (-47.704,86.909,154.157)
C4: (-46.670,86.286,154.831)
P: (-48.576,88.652,161.579)
C4': (-45.913,87.731,159.214)
C2': (-44.584,87.009,157.373)
C2: (-46.019,85.221,153.042)
N1: (-46.981,85.755,152.273)
N3: (-45.777,85.416,154.327)
N6: (-48.845,87.127,152.027)
N7: (-48.424,87.727,155.000)
N9: (-46.736,86.770,156.113)
O5': (-48.007,88.247,160.179)
O3': (-43.716,88.678,158.967)
OP2: (-49.551,89.771,161.416)
C3': (-44.847,88.218,158.270)
C1': (-45.965,86.383,157.302)
C5': (-46.806,88.791,159.737)
O4': (-46.686,86.793,158.439)
C8: (-47.821,87.595,156.152)
O2': (-43.704,86.079,158.008)
C6: (-47.873,86.619,152.801)
C5: (-47.704,86.909,154.157)
C4: (-46.670,86.286,154.831)
P: (-48.576,88.652,161.579)
C4': (-45.913,87.731,159.214)
C2': (-44.584,87.009,157.373)
C2: (-46.019,85.221,153.042)
N1: (-46.981,85.755,152.273)
N3: (-45.777,85.416,154.327)
N6: (-48.845,87.127,152.027)
N7: (-48.424,87.727,155.000)
N9: (-46.736,86.770,156.113)
O5': (-48.007,88.247,160.179)
O3': (-43.716,88.678,158.967)
Image (generated by PyMOL):