Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:21544:21487
Extra
PDB:
ATOM 1 O3' U A1543 -65.510 -71.180 44.498 1.00 75.62 O
ATOM 2 P G A1544 -64.847 -72.485 45.139 1.00 84.87 P
ATOM 3 OP1 G A1544 -65.181 -72.486 46.581 1.00 85.02 O
ATOM 4 OP2 G A1544 -63.428 -72.480 44.736 1.00 84.57 O
ATOM 5 O5' G A1544 -65.617 -73.677 44.408 1.00 85.40 O
ATOM 6 C5' G A1544 -67.027 -73.743 44.427 1.00 85.73 C
ATOM 7 C4' G A1544 -67.530 -74.902 43.620 1.00 86.20 C
ATOM 8 O4' G A1544 -67.390 -74.634 42.200 1.00 86.02 O
ATOM 9 C3' G A1544 -66.797 -76.210 43.817 1.00 86.50 C
ATOM 10 O3' G A1544 -67.197 -76.876 44.982 1.00 86.89 O
ATOM 11 C2' G A1544 -67.133 -76.966 42.540 1.00 86.78 C
ATOM 12 O2' G A1544 -68.459 -77.471 42.586 1.00 87.25 O
ATOM 13 C1' G A1544 -67.072 -75.834 41.516 1.00 86.33 C
ATOM 14 N9 G A1544 -65.713 -75.692 40.974 1.00 85.98 N
ATOM 15 C8 G A1544 -64.870 -74.650 41.272 1.00 85.47 C
ATOM 16 N7 G A1544 -63.715 -74.779 40.691 1.00 85.27 N
ATOM 17 C5 G A1544 -63.784 -75.981 39.992 1.00 85.68 C
ATOM 18 C6 G A1544 -62.819 -76.629 39.177 1.00 85.71 C
ATOM 19 O6 G A1544 -61.672 -76.267 38.895 1.00 85.39 O
ATOM 20 N1 G A1544 -63.318 -77.817 38.654 1.00 86.21 N
ATOM 21 C2 G A1544 -64.564 -78.320 38.901 1.00 86.62 C
ATOM 22 N2 G A1544 -64.825 -79.485 38.309 1.00 87.07 N
ATOM 23 N3 G A1544 -65.478 -77.734 39.651 1.00 86.60 N
ATOM 24 C4 G A1544 -65.021 -76.569 40.162 1.00 86.12 C
ATOM 25 P C A1545 -66.127 -77.673 45.848 1.00 88.27 P
ATOM 26 OP1 C A1545 -66.785 -78.014 47.128 1.00 88.64 O
ATOM 27 OP2 C A1545 -64.877 -76.858 45.875 1.00 87.72 O
ATOM 28 O5' C A1545 -65.896 -78.986 44.985 1.00 88.65 O
TER
ATOM 1 O3' G B1486 -70.908 -84.139 43.424 1.00 87.15 O
ATOM 2 P A B1487 -72.195 -83.397 42.835 1.00 97.73 P
ATOM 3 OP1 A B1487 -72.893 -82.780 44.007 1.00 97.76 O
ATOM 4 OP2 A B1487 -72.924 -84.386 41.983 1.00 98.24 O
ATOM 5 O5' A B1487 -71.557 -82.249 41.929 1.00 97.07 O
ATOM 6 C5' A B1487 -71.141 -81.021 42.513 1.00 96.54 C
ATOM 7 C4' A B1487 -69.984 -80.396 41.767 1.00 95.99 C
ATOM 8 O4' A B1487 -69.000 -81.412 41.438 1.00 96.11 O
ATOM 9 C3' A B1487 -70.326 -79.740 40.435 1.00 95.78 C
ATOM 10 O3' A B1487 -70.817 -78.415 40.582 1.00 95.44 O
ATOM 11 C2' A B1487 -69.015 -79.827 39.665 1.00 95.47 C
ATOM 12 O2' A B1487 -68.121 -78.790 40.045 1.00 94.91 O
ATOM 13 C1' A B1487 -68.467 -81.175 40.155 1.00 95.84 C
ATOM 14 N9 A B1487 -68.900 -82.268 39.267 1.00 96.31 N
ATOM 15 C8 A B1487 -69.937 -83.136 39.434 1.00 96.88 C
ATOM 16 N7 A B1487 -70.083 -83.950 38.419 1.00 97.18 N
ATOM 17 C5 A B1487 -69.095 -83.580 37.515 1.00 96.79 C
ATOM 18 C6 A B1487 -68.719 -84.050 36.232 1.00 96.85 C
ATOM 19 N6 A B1487 -69.298 -85.055 35.569 1.00 97.34 N
ATOM 20 N1 A B1487 -67.676 -83.458 35.625 1.00 96.40 N
ATOM 21 C2 A B1487 -67.067 -82.448 36.272 1.00 95.91 C
ATOM 22 N3 A B1487 -67.322 -81.917 37.463 1.00 95.79 N
ATOM 23 C4 A B1487 -68.364 -82.537 38.036 1.00 96.25 C
ATOM 24 P G B1488 -72.333 -78.054 40.167 1.00 94.38 P
ATOM 25 OP1 G B1488 -72.406 -76.580 40.029 1.00 93.91 O
ATOM 26 OP2 G B1488 -73.232 -78.724 41.144 1.00 94.89 O
ATOM 27 O5' G B1488 -72.488 -78.745 38.739 1.00 94.63 O
TER
ATOM 2 P G A1544 -64.847 -72.485 45.139 1.00 84.87 P
ATOM 3 OP1 G A1544 -65.181 -72.486 46.581 1.00 85.02 O
ATOM 4 OP2 G A1544 -63.428 -72.480 44.736 1.00 84.57 O
ATOM 5 O5' G A1544 -65.617 -73.677 44.408 1.00 85.40 O
ATOM 6 C5' G A1544 -67.027 -73.743 44.427 1.00 85.73 C
ATOM 7 C4' G A1544 -67.530 -74.902 43.620 1.00 86.20 C
ATOM 8 O4' G A1544 -67.390 -74.634 42.200 1.00 86.02 O
ATOM 9 C3' G A1544 -66.797 -76.210 43.817 1.00 86.50 C
ATOM 10 O3' G A1544 -67.197 -76.876 44.982 1.00 86.89 O
ATOM 11 C2' G A1544 -67.133 -76.966 42.540 1.00 86.78 C
ATOM 12 O2' G A1544 -68.459 -77.471 42.586 1.00 87.25 O
ATOM 13 C1' G A1544 -67.072 -75.834 41.516 1.00 86.33 C
ATOM 14 N9 G A1544 -65.713 -75.692 40.974 1.00 85.98 N
ATOM 15 C8 G A1544 -64.870 -74.650 41.272 1.00 85.47 C
ATOM 16 N7 G A1544 -63.715 -74.779 40.691 1.00 85.27 N
ATOM 17 C5 G A1544 -63.784 -75.981 39.992 1.00 85.68 C
ATOM 18 C6 G A1544 -62.819 -76.629 39.177 1.00 85.71 C
ATOM 19 O6 G A1544 -61.672 -76.267 38.895 1.00 85.39 O
ATOM 20 N1 G A1544 -63.318 -77.817 38.654 1.00 86.21 N
ATOM 21 C2 G A1544 -64.564 -78.320 38.901 1.00 86.62 C
ATOM 22 N2 G A1544 -64.825 -79.485 38.309 1.00 87.07 N
ATOM 23 N3 G A1544 -65.478 -77.734 39.651 1.00 86.60 N
ATOM 24 C4 G A1544 -65.021 -76.569 40.162 1.00 86.12 C
ATOM 25 P C A1545 -66.127 -77.673 45.848 1.00 88.27 P
ATOM 26 OP1 C A1545 -66.785 -78.014 47.128 1.00 88.64 O
ATOM 27 OP2 C A1545 -64.877 -76.858 45.875 1.00 87.72 O
ATOM 28 O5' C A1545 -65.896 -78.986 44.985 1.00 88.65 O
TER
ATOM 1 O3' G B1486 -70.908 -84.139 43.424 1.00 87.15 O
ATOM 2 P A B1487 -72.195 -83.397 42.835 1.00 97.73 P
ATOM 3 OP1 A B1487 -72.893 -82.780 44.007 1.00 97.76 O
ATOM 4 OP2 A B1487 -72.924 -84.386 41.983 1.00 98.24 O
ATOM 5 O5' A B1487 -71.557 -82.249 41.929 1.00 97.07 O
ATOM 6 C5' A B1487 -71.141 -81.021 42.513 1.00 96.54 C
ATOM 7 C4' A B1487 -69.984 -80.396 41.767 1.00 95.99 C
ATOM 8 O4' A B1487 -69.000 -81.412 41.438 1.00 96.11 O
ATOM 9 C3' A B1487 -70.326 -79.740 40.435 1.00 95.78 C
ATOM 10 O3' A B1487 -70.817 -78.415 40.582 1.00 95.44 O
ATOM 11 C2' A B1487 -69.015 -79.827 39.665 1.00 95.47 C
ATOM 12 O2' A B1487 -68.121 -78.790 40.045 1.00 94.91 O
ATOM 13 C1' A B1487 -68.467 -81.175 40.155 1.00 95.84 C
ATOM 14 N9 A B1487 -68.900 -82.268 39.267 1.00 96.31 N
ATOM 15 C8 A B1487 -69.937 -83.136 39.434 1.00 96.88 C
ATOM 16 N7 A B1487 -70.083 -83.950 38.419 1.00 97.18 N
ATOM 17 C5 A B1487 -69.095 -83.580 37.515 1.00 96.79 C
ATOM 18 C6 A B1487 -68.719 -84.050 36.232 1.00 96.85 C
ATOM 19 N6 A B1487 -69.298 -85.055 35.569 1.00 97.34 N
ATOM 20 N1 A B1487 -67.676 -83.458 35.625 1.00 96.40 N
ATOM 21 C2 A B1487 -67.067 -82.448 36.272 1.00 95.91 C
ATOM 22 N3 A B1487 -67.322 -81.917 37.463 1.00 95.79 N
ATOM 23 C4 A B1487 -68.364 -82.537 38.036 1.00 96.25 C
ATOM 24 P G B1488 -72.333 -78.054 40.167 1.00 94.38 P
ATOM 25 OP1 G B1488 -72.406 -76.580 40.029 1.00 93.91 O
ATOM 26 OP2 G B1488 -73.232 -78.724 41.144 1.00 94.89 O
ATOM 27 O5' G B1488 -72.488 -78.745 38.739 1.00 94.63 O
TER
Atoms:
OP1: (-65.181,-72.486,46.581)
OP2: (-63.428,-72.480,44.736)
C3': (-66.797,-76.210,43.817)
C1': (-67.072,-75.834,41.516)
C5': (-67.027,-73.743,44.427)
O6: (-61.672,-76.267,38.895)
O4': (-67.390,-74.634,42.200)
C8: (-64.870,-74.650,41.272)
C2: (-64.564,-78.320,38.901)
C6: (-62.819,-76.629,39.177)
C5: (-63.784,-75.981,39.992)
C4: (-65.021,-76.569,40.162)
P: (-64.847,-72.485,45.139)
C4': (-67.530,-74.902,43.620)
C2': (-67.133,-76.966,42.540)
O2': (-68.459,-77.471,42.586)
N1: (-63.318,-77.817,38.654)
N2: (-64.825,-79.485,38.309)
N3: (-65.478,-77.734,39.651)
N7: (-63.715,-74.779,40.691)
N9: (-65.713,-75.692,40.974)
O5': (-65.617,-73.677,44.408)
O3': (-67.197,-76.876,44.982)
OP2: (-63.428,-72.480,44.736)
C3': (-66.797,-76.210,43.817)
C1': (-67.072,-75.834,41.516)
C5': (-67.027,-73.743,44.427)
O6: (-61.672,-76.267,38.895)
O4': (-67.390,-74.634,42.200)
C8: (-64.870,-74.650,41.272)
C2: (-64.564,-78.320,38.901)
C6: (-62.819,-76.629,39.177)
C5: (-63.784,-75.981,39.992)
C4: (-65.021,-76.569,40.162)
P: (-64.847,-72.485,45.139)
C4': (-67.530,-74.902,43.620)
C2': (-67.133,-76.966,42.540)
O2': (-68.459,-77.471,42.586)
N1: (-63.318,-77.817,38.654)
N2: (-64.825,-79.485,38.309)
N3: (-65.478,-77.734,39.651)
N7: (-63.715,-74.779,40.691)
N9: (-65.713,-75.692,40.974)
O5': (-65.617,-73.677,44.408)
O3': (-67.197,-76.876,44.982)
OP1: (-72.893,-82.780,44.007)
OP2: (-72.924,-84.386,41.983)
C3': (-70.326,-79.740,40.435)
C1': (-68.467,-81.175,40.155)
C5': (-71.141,-81.021,42.513)
O4': (-69.000,-81.412,41.438)
C8: (-69.937,-83.136,39.434)
O2': (-68.121,-78.790,40.045)
C6: (-68.719,-84.050,36.232)
C5: (-69.095,-83.580,37.515)
C4: (-68.364,-82.537,38.036)
P: (-72.195,-83.397,42.835)
C4': (-69.984,-80.396,41.767)
C2': (-69.015,-79.827,39.665)
C2: (-67.067,-82.448,36.272)
N1: (-67.676,-83.458,35.625)
N3: (-67.322,-81.917,37.463)
N6: (-69.298,-85.055,35.569)
N7: (-70.083,-83.950,38.419)
N9: (-68.900,-82.268,39.267)
O5': (-71.557,-82.249,41.929)
O3': (-70.817,-78.415,40.582)
OP2: (-72.924,-84.386,41.983)
C3': (-70.326,-79.740,40.435)
C1': (-68.467,-81.175,40.155)
C5': (-71.141,-81.021,42.513)
O4': (-69.000,-81.412,41.438)
C8: (-69.937,-83.136,39.434)
O2': (-68.121,-78.790,40.045)
C6: (-68.719,-84.050,36.232)
C5: (-69.095,-83.580,37.515)
C4: (-68.364,-82.537,38.036)
P: (-72.195,-83.397,42.835)
C4': (-69.984,-80.396,41.767)
C2': (-69.015,-79.827,39.665)
C2: (-67.067,-82.448,36.272)
N1: (-67.676,-83.458,35.625)
N3: (-67.322,-81.917,37.463)
N6: (-69.298,-85.055,35.569)
N7: (-70.083,-83.950,38.419)
N9: (-68.900,-82.268,39.267)
O5': (-71.557,-82.249,41.929)
O3': (-70.817,-78.415,40.582)
Image (generated by PyMOL):