Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1K9M:A1039:A1040
Extra
PDB:
ATOM 1 O3' A A1038 34.664 111.087 106.662 1.00 35.89 O
ATOM 2 P C A1039 34.458 110.024 105.484 1.00 37.95 P
ATOM 3 OP1 C A1039 34.452 110.829 104.229 1.00 38.25 O
ATOM 4 OP2 C A1039 33.310 109.140 105.793 1.00 40.06 O
ATOM 5 O5' C A1039 35.774 109.138 105.546 1.00 38.82 O
ATOM 6 C5' C A1039 36.890 109.385 104.676 1.00 39.25 C
ATOM 7 C4' C A1039 37.924 108.325 104.900 1.00 41.84 C
ATOM 8 O4' C A1039 38.332 108.370 106.300 1.00 42.42 O
ATOM 9 C3' C A1039 37.403 106.902 104.750 1.00 43.78 C
ATOM 10 O3' C A1039 37.272 106.366 103.418 1.00 46.46 O
ATOM 11 C2' C A1039 38.443 106.132 105.556 1.00 44.69 C
ATOM 12 O2' C A1039 39.694 106.038 104.893 1.00 43.84 O
ATOM 13 C1' C A1039 38.614 107.052 106.763 1.00 44.25 C
ATOM 14 N1 C A1039 37.677 106.699 107.856 1.00 45.58 N
ATOM 15 C2 C A1039 38.144 105.924 108.952 1.00 46.39 C
ATOM 16 O2 C A1039 39.343 105.587 108.999 1.00 49.24 O
ATOM 17 N3 C A1039 37.268 105.569 109.923 1.00 45.36 N
ATOM 18 C4 C A1039 35.988 105.959 109.848 1.00 44.79 C
ATOM 19 N4 C A1039 35.156 105.587 110.829 1.00 44.38 N
ATOM 20 C5 C A1039 35.501 106.750 108.767 1.00 44.73 C
ATOM 21 C6 C A1039 36.368 107.095 107.805 1.00 44.70 C
ATOM 22 P A A1040 38.040 107.030 102.167 1.00 48.75 P
ATOM 23 OP1 A A1040 39.245 107.732 102.653 1.00 48.71 O
ATOM 24 OP2 A A1040 37.076 107.745 101.277 1.00 49.63 O
ATOM 25 O5' A A1040 38.556 105.763 101.349 1.00 45.97 O
TER
ATOM 1 O3' C B1039 37.272 106.366 103.418 1.00 46.46 O
ATOM 2 P A B1040 38.040 107.030 102.167 1.00 48.75 P
ATOM 3 OP1 A B1040 39.245 107.732 102.653 1.00 48.71 O
ATOM 4 OP2 A B1040 37.076 107.745 101.277 1.00 49.63 O
ATOM 5 O5' A B1040 38.556 105.763 101.349 1.00 45.97 O
ATOM 6 C5' A B1040 38.721 104.492 101.980 1.00 39.17 C
ATOM 7 C4' A B1040 38.764 103.407 100.951 1.00 36.26 C
ATOM 8 O4' A B1040 39.803 103.671 99.992 1.00 33.87 O
ATOM 9 C3' A B1040 39.078 102.030 101.493 1.00 35.55 C
ATOM 10 O3' A B1040 37.864 101.433 101.931 1.00 35.71 O
ATOM 11 C2' A B1040 39.570 101.314 100.243 1.00 35.76 C
ATOM 12 O2' A B1040 38.484 100.927 99.433 1.00 37.60 O
ATOM 13 C1' A B1040 40.312 102.440 99.513 1.00 34.24 C
ATOM 14 N9 A B1040 41.767 102.419 99.696 1.00 33.29 N
ATOM 15 C8 A B1040 42.529 102.967 100.694 1.00 33.06 C
ATOM 16 N7 A B1040 43.810 102.761 100.551 1.00 33.56 N
ATOM 17 C5 A B1040 43.905 102.033 99.380 1.00 32.03 C
ATOM 18 C6 A B1040 45.006 101.504 98.681 1.00 30.55 C
ATOM 19 N6 A B1040 46.271 101.648 99.071 1.00 29.34 N
ATOM 20 N1 A B1040 44.757 100.814 97.554 1.00 31.23 N
ATOM 21 C2 A B1040 43.492 100.678 97.162 1.00 30.28 C
ATOM 22 N3 A B1040 42.382 101.132 97.725 1.00 30.60 N
ATOM 23 C4 A B1040 42.657 101.810 98.846 1.00 31.84 C
ATOM 24 P A B1041 37.638 101.052 103.477 1.00 36.04 P
ATOM 25 OP1 A B1041 36.212 101.372 103.742 1.00 35.20 O
ATOM 26 OP2 A B1041 38.688 101.645 104.322 1.00 35.82 O
ATOM 27 O5' A B1041 37.834 99.476 103.497 1.00 33.48 O
TER
ATOM 2 P C A1039 34.458 110.024 105.484 1.00 37.95 P
ATOM 3 OP1 C A1039 34.452 110.829 104.229 1.00 38.25 O
ATOM 4 OP2 C A1039 33.310 109.140 105.793 1.00 40.06 O
ATOM 5 O5' C A1039 35.774 109.138 105.546 1.00 38.82 O
ATOM 6 C5' C A1039 36.890 109.385 104.676 1.00 39.25 C
ATOM 7 C4' C A1039 37.924 108.325 104.900 1.00 41.84 C
ATOM 8 O4' C A1039 38.332 108.370 106.300 1.00 42.42 O
ATOM 9 C3' C A1039 37.403 106.902 104.750 1.00 43.78 C
ATOM 10 O3' C A1039 37.272 106.366 103.418 1.00 46.46 O
ATOM 11 C2' C A1039 38.443 106.132 105.556 1.00 44.69 C
ATOM 12 O2' C A1039 39.694 106.038 104.893 1.00 43.84 O
ATOM 13 C1' C A1039 38.614 107.052 106.763 1.00 44.25 C
ATOM 14 N1 C A1039 37.677 106.699 107.856 1.00 45.58 N
ATOM 15 C2 C A1039 38.144 105.924 108.952 1.00 46.39 C
ATOM 16 O2 C A1039 39.343 105.587 108.999 1.00 49.24 O
ATOM 17 N3 C A1039 37.268 105.569 109.923 1.00 45.36 N
ATOM 18 C4 C A1039 35.988 105.959 109.848 1.00 44.79 C
ATOM 19 N4 C A1039 35.156 105.587 110.829 1.00 44.38 N
ATOM 20 C5 C A1039 35.501 106.750 108.767 1.00 44.73 C
ATOM 21 C6 C A1039 36.368 107.095 107.805 1.00 44.70 C
ATOM 22 P A A1040 38.040 107.030 102.167 1.00 48.75 P
ATOM 23 OP1 A A1040 39.245 107.732 102.653 1.00 48.71 O
ATOM 24 OP2 A A1040 37.076 107.745 101.277 1.00 49.63 O
ATOM 25 O5' A A1040 38.556 105.763 101.349 1.00 45.97 O
TER
ATOM 1 O3' C B1039 37.272 106.366 103.418 1.00 46.46 O
ATOM 2 P A B1040 38.040 107.030 102.167 1.00 48.75 P
ATOM 3 OP1 A B1040 39.245 107.732 102.653 1.00 48.71 O
ATOM 4 OP2 A B1040 37.076 107.745 101.277 1.00 49.63 O
ATOM 5 O5' A B1040 38.556 105.763 101.349 1.00 45.97 O
ATOM 6 C5' A B1040 38.721 104.492 101.980 1.00 39.17 C
ATOM 7 C4' A B1040 38.764 103.407 100.951 1.00 36.26 C
ATOM 8 O4' A B1040 39.803 103.671 99.992 1.00 33.87 O
ATOM 9 C3' A B1040 39.078 102.030 101.493 1.00 35.55 C
ATOM 10 O3' A B1040 37.864 101.433 101.931 1.00 35.71 O
ATOM 11 C2' A B1040 39.570 101.314 100.243 1.00 35.76 C
ATOM 12 O2' A B1040 38.484 100.927 99.433 1.00 37.60 O
ATOM 13 C1' A B1040 40.312 102.440 99.513 1.00 34.24 C
ATOM 14 N9 A B1040 41.767 102.419 99.696 1.00 33.29 N
ATOM 15 C8 A B1040 42.529 102.967 100.694 1.00 33.06 C
ATOM 16 N7 A B1040 43.810 102.761 100.551 1.00 33.56 N
ATOM 17 C5 A B1040 43.905 102.033 99.380 1.00 32.03 C
ATOM 18 C6 A B1040 45.006 101.504 98.681 1.00 30.55 C
ATOM 19 N6 A B1040 46.271 101.648 99.071 1.00 29.34 N
ATOM 20 N1 A B1040 44.757 100.814 97.554 1.00 31.23 N
ATOM 21 C2 A B1040 43.492 100.678 97.162 1.00 30.28 C
ATOM 22 N3 A B1040 42.382 101.132 97.725 1.00 30.60 N
ATOM 23 C4 A B1040 42.657 101.810 98.846 1.00 31.84 C
ATOM 24 P A B1041 37.638 101.052 103.477 1.00 36.04 P
ATOM 25 OP1 A B1041 36.212 101.372 103.742 1.00 35.20 O
ATOM 26 OP2 A B1041 38.688 101.645 104.322 1.00 35.82 O
ATOM 27 O5' A B1041 37.834 99.476 103.497 1.00 33.48 O
TER
Atoms:
C2: (38.144,105.924,108.952)
OP1: (34.452,110.829,104.229)
OP2: (33.310,109.140,105.793)
C4: (35.988,105.959,109.848)
O5': (35.774,109.138,105.546)
C3': (37.403,106.902,104.750)
C1': (38.614,107.052,106.763)
O4': (38.332,108.370,106.300)
C5': (36.890,109.385,104.676)
P: (34.458,110.024,105.484)
O2: (39.343,105.587,108.999)
C4': (37.924,108.325,104.900)
C2': (38.443,106.132,105.556)
O2': (39.694,106.038,104.893)
N1: (37.677,106.699,107.856)
N3: (37.268,105.569,109.923)
N4: (35.156,105.587,110.829)
C6: (36.368,107.095,107.805)
C5: (35.501,106.750,108.767)
O3': (37.272,106.366,103.418)
OP1: (34.452,110.829,104.229)
OP2: (33.310,109.140,105.793)
C4: (35.988,105.959,109.848)
O5': (35.774,109.138,105.546)
C3': (37.403,106.902,104.750)
C1': (38.614,107.052,106.763)
O4': (38.332,108.370,106.300)
C5': (36.890,109.385,104.676)
P: (34.458,110.024,105.484)
O2: (39.343,105.587,108.999)
C4': (37.924,108.325,104.900)
C2': (38.443,106.132,105.556)
O2': (39.694,106.038,104.893)
N1: (37.677,106.699,107.856)
N3: (37.268,105.569,109.923)
N4: (35.156,105.587,110.829)
C6: (36.368,107.095,107.805)
C5: (35.501,106.750,108.767)
O3': (37.272,106.366,103.418)
OP1: (39.245,107.732,102.653)
OP2: (37.076,107.745,101.277)
C3': (39.078,102.030,101.493)
C1': (40.312,102.440,99.513)
C5': (38.721,104.492,101.980)
O4': (39.803,103.671,99.992)
C8: (42.529,102.967,100.694)
O2': (38.484,100.927,99.433)
C6: (45.006,101.504,98.681)
C5: (43.905,102.033,99.380)
C4: (42.657,101.810,98.846)
P: (38.040,107.030,102.167)
C4': (38.764,103.407,100.951)
C2': (39.570,101.314,100.243)
C2: (43.492,100.678,97.162)
N1: (44.757,100.814,97.554)
N3: (42.382,101.132,97.725)
N6: (46.271,101.648,99.071)
N7: (43.810,102.761,100.551)
N9: (41.767,102.419,99.696)
O5': (38.556,105.763,101.349)
O3': (37.864,101.433,101.931)
OP2: (37.076,107.745,101.277)
C3': (39.078,102.030,101.493)
C1': (40.312,102.440,99.513)
C5': (38.721,104.492,101.980)
O4': (39.803,103.671,99.992)
C8: (42.529,102.967,100.694)
O2': (38.484,100.927,99.433)
C6: (45.006,101.504,98.681)
C5: (43.905,102.033,99.380)
C4: (42.657,101.810,98.846)
P: (38.040,107.030,102.167)
C4': (38.764,103.407,100.951)
C2': (39.570,101.314,100.243)
C2: (43.492,100.678,97.162)
N1: (44.757,100.814,97.554)
N3: (42.382,101.132,97.725)
N6: (46.271,101.648,99.071)
N7: (43.810,102.761,100.551)
N9: (41.767,102.419,99.696)
O5': (38.556,105.763,101.349)
O3': (37.864,101.433,101.931)
Image (generated by PyMOL):