Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1N8R:A1039:A1040
Extra
PDB:
ATOM 1 O3' A A1038 34.889 111.585 106.692 1.00 25.12 O
ATOM 2 P C A1039 34.679 110.446 105.576 1.00 27.02 P
ATOM 3 OP1 C A1039 34.600 111.126 104.262 1.00 26.20 O
ATOM 4 OP2 C A1039 33.611 109.497 105.983 1.00 26.36 O
ATOM 5 O5' C A1039 36.029 109.630 105.594 1.00 28.32 O
ATOM 6 C5' C A1039 37.035 109.868 104.629 1.00 32.56 C
ATOM 7 C4' C A1039 38.101 108.849 104.801 1.00 36.90 C
ATOM 8 O4' C A1039 38.540 108.926 106.186 1.00 38.53 O
ATOM 9 C3' C A1039 37.606 107.414 104.682 1.00 40.11 C
ATOM 10 O3' C A1039 37.488 106.862 103.368 1.00 40.68 O
ATOM 11 C2' C A1039 38.692 106.695 105.459 1.00 42.40 C
ATOM 12 O2' C A1039 39.924 106.667 104.759 1.00 45.06 O
ATOM 13 C1' C A1039 38.826 107.620 106.661 1.00 41.07 C
ATOM 14 N1 C A1039 37.855 107.242 107.709 1.00 40.94 N
ATOM 15 C2 C A1039 38.310 106.456 108.777 1.00 41.47 C
ATOM 16 O2 C A1039 39.500 106.113 108.809 1.00 43.70 O
ATOM 17 N3 C A1039 37.448 106.088 109.744 1.00 40.26 N
ATOM 18 C4 C A1039 36.179 106.473 109.678 1.00 38.52 C
ATOM 19 N4 C A1039 35.370 106.115 110.666 1.00 37.92 N
ATOM 20 C5 C A1039 35.681 107.256 108.598 1.00 38.80 C
ATOM 21 C6 C A1039 36.545 107.623 107.648 1.00 39.01 C
ATOM 22 P A A1040 38.217 107.554 102.113 1.00 42.21 P
ATOM 23 OP1 A A1040 39.411 108.292 102.609 1.00 41.59 O
ATOM 24 OP2 A A1040 37.208 108.269 101.277 1.00 42.82 O
ATOM 25 O5' A A1040 38.750 106.299 101.281 1.00 37.07 O
TER
ATOM 1 O3' C B1039 37.488 106.862 103.368 1.00 40.68 O
ATOM 2 P A B1040 38.217 107.554 102.113 1.00 42.21 P
ATOM 3 OP1 A B1040 39.411 108.292 102.609 1.00 41.59 O
ATOM 4 OP2 A B1040 37.208 108.269 101.277 1.00 42.82 O
ATOM 5 O5' A B1040 38.750 106.299 101.281 1.00 37.07 O
ATOM 6 C5' A B1040 38.865 105.000 101.890 1.00 27.20 C
ATOM 7 C4' A B1040 38.840 103.926 100.827 1.00 25.62 C
ATOM 8 O4' A B1040 39.885 104.173 99.851 1.00 23.82 O
ATOM 9 C3' A B1040 39.118 102.525 101.341 1.00 24.25 C
ATOM 10 O3' A B1040 37.922 101.922 101.842 1.00 25.27 O
ATOM 11 C2' A B1040 39.643 101.815 100.096 1.00 23.97 C
ATOM 12 O2' A B1040 38.653 101.318 99.217 1.00 25.66 O
ATOM 13 C1' A B1040 40.382 102.942 99.380 1.00 23.58 C
ATOM 14 N9 A B1040 41.820 102.886 99.598 1.00 23.07 N
ATOM 15 C8 A B1040 42.546 103.367 100.650 1.00 22.50 C
ATOM 16 N7 A B1040 43.837 103.144 100.546 1.00 22.57 N
ATOM 17 C5 A B1040 43.962 102.473 99.336 1.00 21.25 C
ATOM 18 C6 A B1040 45.067 101.958 98.645 1.00 20.73 C
ATOM 19 N6 A B1040 46.305 102.041 99.086 1.00 21.35 N
ATOM 20 N1 A B1040 44.845 101.340 97.469 1.00 19.65 N
ATOM 21 C2 A B1040 43.593 101.250 97.021 1.00 20.18 C
ATOM 22 N3 A B1040 42.468 101.695 97.576 1.00 21.59 N
ATOM 23 C4 A B1040 42.726 102.304 98.746 1.00 21.83 C
ATOM 24 P A B1041 37.759 101.608 103.417 1.00 26.93 P
ATOM 25 OP1 A B1041 36.346 101.880 103.703 1.00 26.46 O
ATOM 26 OP2 A B1041 38.795 102.239 104.257 1.00 26.12 O
ATOM 27 O5' A B1041 37.990 100.041 103.512 1.00 25.17 O
TER
ATOM 2 P C A1039 34.679 110.446 105.576 1.00 27.02 P
ATOM 3 OP1 C A1039 34.600 111.126 104.262 1.00 26.20 O
ATOM 4 OP2 C A1039 33.611 109.497 105.983 1.00 26.36 O
ATOM 5 O5' C A1039 36.029 109.630 105.594 1.00 28.32 O
ATOM 6 C5' C A1039 37.035 109.868 104.629 1.00 32.56 C
ATOM 7 C4' C A1039 38.101 108.849 104.801 1.00 36.90 C
ATOM 8 O4' C A1039 38.540 108.926 106.186 1.00 38.53 O
ATOM 9 C3' C A1039 37.606 107.414 104.682 1.00 40.11 C
ATOM 10 O3' C A1039 37.488 106.862 103.368 1.00 40.68 O
ATOM 11 C2' C A1039 38.692 106.695 105.459 1.00 42.40 C
ATOM 12 O2' C A1039 39.924 106.667 104.759 1.00 45.06 O
ATOM 13 C1' C A1039 38.826 107.620 106.661 1.00 41.07 C
ATOM 14 N1 C A1039 37.855 107.242 107.709 1.00 40.94 N
ATOM 15 C2 C A1039 38.310 106.456 108.777 1.00 41.47 C
ATOM 16 O2 C A1039 39.500 106.113 108.809 1.00 43.70 O
ATOM 17 N3 C A1039 37.448 106.088 109.744 1.00 40.26 N
ATOM 18 C4 C A1039 36.179 106.473 109.678 1.00 38.52 C
ATOM 19 N4 C A1039 35.370 106.115 110.666 1.00 37.92 N
ATOM 20 C5 C A1039 35.681 107.256 108.598 1.00 38.80 C
ATOM 21 C6 C A1039 36.545 107.623 107.648 1.00 39.01 C
ATOM 22 P A A1040 38.217 107.554 102.113 1.00 42.21 P
ATOM 23 OP1 A A1040 39.411 108.292 102.609 1.00 41.59 O
ATOM 24 OP2 A A1040 37.208 108.269 101.277 1.00 42.82 O
ATOM 25 O5' A A1040 38.750 106.299 101.281 1.00 37.07 O
TER
ATOM 1 O3' C B1039 37.488 106.862 103.368 1.00 40.68 O
ATOM 2 P A B1040 38.217 107.554 102.113 1.00 42.21 P
ATOM 3 OP1 A B1040 39.411 108.292 102.609 1.00 41.59 O
ATOM 4 OP2 A B1040 37.208 108.269 101.277 1.00 42.82 O
ATOM 5 O5' A B1040 38.750 106.299 101.281 1.00 37.07 O
ATOM 6 C5' A B1040 38.865 105.000 101.890 1.00 27.20 C
ATOM 7 C4' A B1040 38.840 103.926 100.827 1.00 25.62 C
ATOM 8 O4' A B1040 39.885 104.173 99.851 1.00 23.82 O
ATOM 9 C3' A B1040 39.118 102.525 101.341 1.00 24.25 C
ATOM 10 O3' A B1040 37.922 101.922 101.842 1.00 25.27 O
ATOM 11 C2' A B1040 39.643 101.815 100.096 1.00 23.97 C
ATOM 12 O2' A B1040 38.653 101.318 99.217 1.00 25.66 O
ATOM 13 C1' A B1040 40.382 102.942 99.380 1.00 23.58 C
ATOM 14 N9 A B1040 41.820 102.886 99.598 1.00 23.07 N
ATOM 15 C8 A B1040 42.546 103.367 100.650 1.00 22.50 C
ATOM 16 N7 A B1040 43.837 103.144 100.546 1.00 22.57 N
ATOM 17 C5 A B1040 43.962 102.473 99.336 1.00 21.25 C
ATOM 18 C6 A B1040 45.067 101.958 98.645 1.00 20.73 C
ATOM 19 N6 A B1040 46.305 102.041 99.086 1.00 21.35 N
ATOM 20 N1 A B1040 44.845 101.340 97.469 1.00 19.65 N
ATOM 21 C2 A B1040 43.593 101.250 97.021 1.00 20.18 C
ATOM 22 N3 A B1040 42.468 101.695 97.576 1.00 21.59 N
ATOM 23 C4 A B1040 42.726 102.304 98.746 1.00 21.83 C
ATOM 24 P A B1041 37.759 101.608 103.417 1.00 26.93 P
ATOM 25 OP1 A B1041 36.346 101.880 103.703 1.00 26.46 O
ATOM 26 OP2 A B1041 38.795 102.239 104.257 1.00 26.12 O
ATOM 27 O5' A B1041 37.990 100.041 103.512 1.00 25.17 O
TER
Atoms:
C2: (38.310,106.456,108.777)
OP1: (34.600,111.126,104.262)
OP2: (33.611,109.497,105.983)
C4: (36.179,106.473,109.678)
O5': (36.029,109.630,105.594)
C3': (37.606,107.414,104.682)
C1': (38.826,107.620,106.661)
O4': (38.540,108.926,106.186)
C5': (37.035,109.868,104.629)
P: (34.679,110.446,105.576)
O2: (39.500,106.113,108.809)
C4': (38.101,108.849,104.801)
C2': (38.692,106.695,105.459)
O2': (39.924,106.667,104.759)
N1: (37.855,107.242,107.709)
N3: (37.448,106.088,109.744)
N4: (35.370,106.115,110.666)
C6: (36.545,107.623,107.648)
C5: (35.681,107.256,108.598)
O3': (37.488,106.862,103.368)
OP1: (34.600,111.126,104.262)
OP2: (33.611,109.497,105.983)
C4: (36.179,106.473,109.678)
O5': (36.029,109.630,105.594)
C3': (37.606,107.414,104.682)
C1': (38.826,107.620,106.661)
O4': (38.540,108.926,106.186)
C5': (37.035,109.868,104.629)
P: (34.679,110.446,105.576)
O2: (39.500,106.113,108.809)
C4': (38.101,108.849,104.801)
C2': (38.692,106.695,105.459)
O2': (39.924,106.667,104.759)
N1: (37.855,107.242,107.709)
N3: (37.448,106.088,109.744)
N4: (35.370,106.115,110.666)
C6: (36.545,107.623,107.648)
C5: (35.681,107.256,108.598)
O3': (37.488,106.862,103.368)
OP1: (39.411,108.292,102.609)
OP2: (37.208,108.269,101.277)
C3': (39.118,102.525,101.341)
C1': (40.382,102.942,99.380)
C5': (38.865,105.000,101.890)
O4': (39.885,104.173,99.851)
C8: (42.546,103.367,100.650)
O2': (38.653,101.318,99.217)
C6: (45.067,101.958,98.645)
C5: (43.962,102.473,99.336)
C4: (42.726,102.304,98.746)
P: (38.217,107.554,102.113)
C4': (38.840,103.926,100.827)
C2': (39.643,101.815,100.096)
C2: (43.593,101.250,97.021)
N1: (44.845,101.340,97.469)
N3: (42.468,101.695,97.576)
N6: (46.305,102.041,99.086)
N7: (43.837,103.144,100.546)
N9: (41.820,102.886,99.598)
O5': (38.750,106.299,101.281)
O3': (37.922,101.922,101.842)
OP2: (37.208,108.269,101.277)
C3': (39.118,102.525,101.341)
C1': (40.382,102.942,99.380)
C5': (38.865,105.000,101.890)
O4': (39.885,104.173,99.851)
C8: (42.546,103.367,100.650)
O2': (38.653,101.318,99.217)
C6: (45.067,101.958,98.645)
C5: (43.962,102.473,99.336)
C4: (42.726,102.304,98.746)
P: (38.217,107.554,102.113)
C4': (38.840,103.926,100.827)
C2': (39.643,101.815,100.096)
C2: (43.593,101.250,97.021)
N1: (44.845,101.340,97.469)
N3: (42.468,101.695,97.576)
N6: (46.305,102.041,99.086)
N7: (43.837,103.144,100.546)
N9: (41.820,102.886,99.598)
O5': (38.750,106.299,101.281)
O3': (37.922,101.922,101.842)
Image (generated by PyMOL):