ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OI1:A560:A1168

Extra

PDB:
ATOM 1 O3' G A 559 177.457 -92.826 -79.291 1.00112.06 O
ATOM 2 P G A 560 177.470 -93.455 -80.774 1.00146.50 P
ATOM 3 OP1 G A 560 176.289 -92.917 -81.498 1.00105.78 O
ATOM 4 OP2 G A 560 177.605 -94.922 -80.627 1.00104.70 O
ATOM 5 O5' G A 560 178.802 -92.853 -81.392 1.00 93.12 O
ATOM 6 C5' G A 560 180.050 -93.483 -81.155 1.00 82.69 C
ATOM 7 C4' G A 560 181.216 -92.589 -81.502 1.00 72.39 C
ATOM 8 O4' G A 560 182.164 -92.596 -80.396 1.00 82.09 O
ATOM 9 C3' G A 560 182.022 -93.030 -82.728 1.00 77.44 C
ATOM 10 O3' G A 560 181.568 -92.420 -83.933 1.00 69.24 O
ATOM 11 C2' G A 560 183.469 -92.695 -82.353 1.00 72.03 C
ATOM 12 O2' G A 560 183.739 -91.315 -82.561 1.00 69.19 O
ATOM 13 C1' G A 560 183.445 -92.953 -80.850 1.00 73.49 C
ATOM 14 N9 G A 560 183.655 -94.381 -80.513 1.00 74.98 N
ATOM 15 C8 G A 560 182.686 -95.222 -80.013 1.00 74.25 C
ATOM 16 N7 G A 560 183.101 -96.434 -79.769 1.00 75.90 N
ATOM 17 C5 G A 560 184.439 -96.405 -80.111 1.00 75.07 C
ATOM 18 C6 G A 560 185.421 -97.436 -80.053 1.00 80.33 C
ATOM 19 O6 G A 560 185.315 -98.616 -79.673 1.00 72.43 O
ATOM 20 N1 G A 560 186.652 -96.972 -80.511 1.00 84.02 N
ATOM 21 C2 G A 560 186.911 -95.690 -80.949 1.00 85.47 C
ATOM 22 N2 G A 560 188.184 -95.452 -81.344 1.00 89.78 N
ATOM 23 N3 G A 560 185.995 -94.721 -80.996 1.00 80.37 N
ATOM 24 C4 G A 560 184.795 -95.144 -80.564 1.00 76.69 C
ATOM 25 P G A 561 181.571 -93.238 -85.323 1.00 84.66 P
ATOM 26 OP1 G A 561 181.161 -92.268 -86.383 1.00 59.95 O
ATOM 27 OP2 G A 561 180.750 -94.467 -85.136 1.00 73.19 O
ATOM 28 O5' G A 561 183.117 -93.625 -85.480 1.00 50.99 O
TER

ATOM 1 O3' G B1167 188.229 -86.960 -88.125 1.00 68.58 O
ATOM 2 P A B1168 186.780 -86.972 -88.782 1.00 89.74 P
ATOM 3 OP1 A B1168 186.892 -87.762 -90.039 1.00 73.06 O
ATOM 4 OP2 A B1168 186.323 -85.550 -88.845 1.00 61.76 O
ATOM 5 O5' A B1168 185.913 -87.776 -87.714 1.00107.53 O
ATOM 6 C5' A B1168 184.510 -87.570 -87.595 1.00106.23 C
ATOM 7 C4' A B1168 184.037 -87.816 -86.185 1.00107.29 C
ATOM 8 O4' A B1168 184.660 -89.028 -85.676 1.00 94.01 O
ATOM 9 C3' A B1168 184.380 -86.717 -85.189 1.00104.32 C
ATOM 10 O3' A B1168 183.351 -86.632 -84.218 1.00103.84 O
ATOM 11 C2' A B1168 185.647 -87.236 -84.534 1.00 98.58 C
ATOM 12 O2' A B1168 185.892 -86.707 -83.250 1.00 99.42 O
ATOM 13 C1' A B1168 185.373 -88.738 -84.495 1.00 88.69 C
ATOM 14 N9 A B1168 186.581 -89.559 -84.491 1.00 66.30 N
ATOM 15 C8 A B1168 187.620 -89.482 -85.371 1.00 75.60 C
ATOM 16 N7 A B1168 188.598 -90.328 -85.137 1.00 73.10 N
ATOM 17 C5 A B1168 188.177 -91.019 -84.009 1.00 66.86 C
ATOM 18 C6 A B1168 188.771 -92.061 -83.246 1.00 70.38 C
ATOM 19 N6 A B1168 189.954 -92.624 -83.513 1.00 68.75 N
ATOM 20 N1 A B1168 188.095 -92.528 -82.174 1.00 68.19 N
ATOM 21 C2 A B1168 186.895 -91.984 -81.900 1.00 70.33 C
ATOM 22 N3 A B1168 186.239 -91.010 -82.537 1.00 84.28 N
ATOM 23 C4 A B1168 186.933 -90.554 -83.604 1.00 73.00 C
ATOM 24 P C B1169 182.177 -85.566 -84.410 1.00101.14 P
ATOM 25 OP1 C B1169 181.051 -85.989 -83.540 1.00131.26 O
ATOM 26 OP2 C B1169 181.944 -85.434 -85.871 1.00132.14 O
ATOM 27 O5' C B1169 182.831 -84.235 -83.842 1.00 84.75 O
TER

Atoms:
OP1: (176.289,-92.917,-81.498)
OP2: (177.605,-94.922,-80.627)
C3': (182.022,-93.030,-82.728)
C1': (183.445,-92.953,-80.850)
C5': (180.050,-93.483,-81.155)
O6: (185.315,-98.616,-79.673)
O4': (182.164,-92.596,-80.396)
C8: (182.686,-95.222,-80.013)
C2: (186.911,-95.690,-80.949)
C6: (185.421,-97.436,-80.053)
C5: (184.439,-96.405,-80.111)
C4: (184.795,-95.144,-80.564)
P: (177.470,-93.455,-80.774)
C4': (181.216,-92.589,-81.502)
C2': (183.469,-92.695,-82.353)
O2': (183.739,-91.315,-82.561)
N1: (186.652,-96.972,-80.511)
N2: (188.184,-95.452,-81.344)
N3: (185.995,-94.721,-80.996)
N7: (183.101,-96.434,-79.769)
N9: (183.655,-94.381,-80.513)
O5': (178.802,-92.853,-81.392)
O3': (181.568,-92.420,-83.933)
OP1: (186.892,-87.762,-90.039)
OP2: (186.323,-85.550,-88.845)
C3': (184.380,-86.717,-85.189)
C1': (185.373,-88.738,-84.495)
C5': (184.510,-87.570,-87.595)
O4': (184.660,-89.028,-85.676)
C8: (187.620,-89.482,-85.371)
O2': (185.892,-86.707,-83.250)
C6: (188.771,-92.061,-83.246)
C5: (188.177,-91.019,-84.009)
C4: (186.933,-90.554,-83.604)
P: (186.780,-86.972,-88.782)
C4': (184.037,-87.816,-86.185)
C2': (185.647,-87.236,-84.534)
C2: (186.895,-91.984,-81.900)
N1: (188.095,-92.528,-82.174)
N3: (186.239,-91.010,-82.537)
N6: (189.954,-92.624,-83.513)
N7: (188.598,-90.328,-85.137)
N9: (186.581,-89.559,-84.491)
O5': (185.913,-87.776,-87.714)
O3': (183.351,-86.632,-84.218)
Image (generated by PyMOL):
PyMOL image
show in jmol