Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1NJI:A1039:A1040
Extra
PDB:
ATOM 1 O3' A A1038 34.453 111.035 106.138 1.00 30.14 O
ATOM 2 P C A1039 34.237 109.945 104.969 1.00 31.74 P
ATOM 3 OP1 C A1039 34.163 110.736 103.703 1.00 29.44 O
ATOM 4 OP2 C A1039 33.155 108.989 105.301 1.00 32.15 O
ATOM 5 O5' C A1039 35.566 109.084 104.986 1.00 32.16 O
ATOM 6 C5' C A1039 36.694 109.412 104.175 1.00 34.09 C
ATOM 7 C4' C A1039 37.747 108.367 104.383 1.00 37.22 C
ATOM 8 O4' C A1039 38.132 108.398 105.785 1.00 39.48 O
ATOM 9 C3' C A1039 37.242 106.938 104.206 1.00 39.63 C
ATOM 10 O3' C A1039 37.176 106.406 102.873 1.00 40.19 O
ATOM 11 C2' C A1039 38.266 106.167 105.023 1.00 42.48 C
ATOM 12 O2' C A1039 39.522 106.066 104.367 1.00 44.96 O
ATOM 13 C1' C A1039 38.420 107.084 106.233 1.00 42.04 C
ATOM 14 N1 C A1039 37.477 106.710 107.309 1.00 43.93 N
ATOM 15 C2 C A1039 37.946 105.929 108.384 1.00 46.57 C
ATOM 16 O2 C A1039 39.145 105.594 108.419 1.00 49.24 O
ATOM 17 N3 C A1039 37.080 105.560 109.358 1.00 46.69 N
ATOM 18 C4 C A1039 35.801 105.944 109.298 1.00 45.30 C
ATOM 19 N4 C A1039 34.990 105.564 110.285 1.00 45.34 N
ATOM 20 C5 C A1039 35.301 106.738 108.225 1.00 45.20 C
ATOM 21 C6 C A1039 36.165 107.096 107.264 1.00 43.82 C
ATOM 22 P A A1040 38.020 107.067 101.680 1.00 42.50 P
ATOM 23 OP1 A A1040 39.231 107.701 102.254 1.00 43.03 O
ATOM 24 OP2 A A1040 37.103 107.870 100.827 1.00 43.53 O
ATOM 25 O5' A A1040 38.500 105.803 100.839 1.00 37.69 O
TER
ATOM 1 O3' C B1039 37.176 106.406 102.873 1.00 40.19 O
ATOM 2 P A B1040 38.020 107.067 101.680 1.00 42.50 P
ATOM 3 OP1 A B1040 39.231 107.701 102.254 1.00 43.03 O
ATOM 4 OP2 A B1040 37.103 107.870 100.827 1.00 43.53 O
ATOM 5 O5' A B1040 38.500 105.803 100.839 1.00 37.69 O
ATOM 6 C5' A B1040 38.605 104.508 101.451 1.00 31.21 C
ATOM 7 C4' A B1040 38.568 103.428 100.401 1.00 27.96 C
ATOM 8 O4' A B1040 39.598 103.674 99.429 1.00 28.16 O
ATOM 9 C3' A B1040 38.858 102.030 100.909 1.00 27.27 C
ATOM 10 O3' A B1040 37.669 101.431 101.394 1.00 28.06 O
ATOM 11 C2' A B1040 39.345 101.315 99.662 1.00 27.32 C
ATOM 12 O2' A B1040 38.272 100.872 98.858 1.00 27.05 O
ATOM 13 C1' A B1040 40.102 102.441 98.952 1.00 27.39 C
ATOM 14 N9 A B1040 41.555 102.438 99.137 1.00 28.06 N
ATOM 15 C8 A B1040 42.318 103.052 100.098 1.00 26.62 C
ATOM 16 N7 A B1040 43.604 102.879 99.935 1.00 26.52 N
ATOM 17 C5 A B1040 43.693 102.090 98.799 1.00 26.28 C
ATOM 18 C6 A B1040 44.785 101.556 98.098 1.00 26.33 C
ATOM 19 N6 A B1040 46.058 101.720 98.461 1.00 26.08 N
ATOM 20 N1 A B1040 44.521 100.825 96.996 1.00 25.87 N
ATOM 21 C2 A B1040 43.252 100.635 96.643 1.00 24.84 C
ATOM 22 N3 A B1040 42.150 101.070 97.224 1.00 26.09 N
ATOM 23 C4 A B1040 42.442 101.805 98.305 1.00 26.55 C
ATOM 24 P A B1041 37.539 101.048 102.943 1.00 29.07 P
ATOM 25 OP1 A B1041 36.130 101.297 103.315 1.00 29.12 O
ATOM 26 OP2 A B1041 38.629 101.708 103.695 1.00 28.35 O
ATOM 27 O5' A B1041 37.776 99.483 102.955 1.00 27.75 O
TER
ATOM 2 P C A1039 34.237 109.945 104.969 1.00 31.74 P
ATOM 3 OP1 C A1039 34.163 110.736 103.703 1.00 29.44 O
ATOM 4 OP2 C A1039 33.155 108.989 105.301 1.00 32.15 O
ATOM 5 O5' C A1039 35.566 109.084 104.986 1.00 32.16 O
ATOM 6 C5' C A1039 36.694 109.412 104.175 1.00 34.09 C
ATOM 7 C4' C A1039 37.747 108.367 104.383 1.00 37.22 C
ATOM 8 O4' C A1039 38.132 108.398 105.785 1.00 39.48 O
ATOM 9 C3' C A1039 37.242 106.938 104.206 1.00 39.63 C
ATOM 10 O3' C A1039 37.176 106.406 102.873 1.00 40.19 O
ATOM 11 C2' C A1039 38.266 106.167 105.023 1.00 42.48 C
ATOM 12 O2' C A1039 39.522 106.066 104.367 1.00 44.96 O
ATOM 13 C1' C A1039 38.420 107.084 106.233 1.00 42.04 C
ATOM 14 N1 C A1039 37.477 106.710 107.309 1.00 43.93 N
ATOM 15 C2 C A1039 37.946 105.929 108.384 1.00 46.57 C
ATOM 16 O2 C A1039 39.145 105.594 108.419 1.00 49.24 O
ATOM 17 N3 C A1039 37.080 105.560 109.358 1.00 46.69 N
ATOM 18 C4 C A1039 35.801 105.944 109.298 1.00 45.30 C
ATOM 19 N4 C A1039 34.990 105.564 110.285 1.00 45.34 N
ATOM 20 C5 C A1039 35.301 106.738 108.225 1.00 45.20 C
ATOM 21 C6 C A1039 36.165 107.096 107.264 1.00 43.82 C
ATOM 22 P A A1040 38.020 107.067 101.680 1.00 42.50 P
ATOM 23 OP1 A A1040 39.231 107.701 102.254 1.00 43.03 O
ATOM 24 OP2 A A1040 37.103 107.870 100.827 1.00 43.53 O
ATOM 25 O5' A A1040 38.500 105.803 100.839 1.00 37.69 O
TER
ATOM 1 O3' C B1039 37.176 106.406 102.873 1.00 40.19 O
ATOM 2 P A B1040 38.020 107.067 101.680 1.00 42.50 P
ATOM 3 OP1 A B1040 39.231 107.701 102.254 1.00 43.03 O
ATOM 4 OP2 A B1040 37.103 107.870 100.827 1.00 43.53 O
ATOM 5 O5' A B1040 38.500 105.803 100.839 1.00 37.69 O
ATOM 6 C5' A B1040 38.605 104.508 101.451 1.00 31.21 C
ATOM 7 C4' A B1040 38.568 103.428 100.401 1.00 27.96 C
ATOM 8 O4' A B1040 39.598 103.674 99.429 1.00 28.16 O
ATOM 9 C3' A B1040 38.858 102.030 100.909 1.00 27.27 C
ATOM 10 O3' A B1040 37.669 101.431 101.394 1.00 28.06 O
ATOM 11 C2' A B1040 39.345 101.315 99.662 1.00 27.32 C
ATOM 12 O2' A B1040 38.272 100.872 98.858 1.00 27.05 O
ATOM 13 C1' A B1040 40.102 102.441 98.952 1.00 27.39 C
ATOM 14 N9 A B1040 41.555 102.438 99.137 1.00 28.06 N
ATOM 15 C8 A B1040 42.318 103.052 100.098 1.00 26.62 C
ATOM 16 N7 A B1040 43.604 102.879 99.935 1.00 26.52 N
ATOM 17 C5 A B1040 43.693 102.090 98.799 1.00 26.28 C
ATOM 18 C6 A B1040 44.785 101.556 98.098 1.00 26.33 C
ATOM 19 N6 A B1040 46.058 101.720 98.461 1.00 26.08 N
ATOM 20 N1 A B1040 44.521 100.825 96.996 1.00 25.87 N
ATOM 21 C2 A B1040 43.252 100.635 96.643 1.00 24.84 C
ATOM 22 N3 A B1040 42.150 101.070 97.224 1.00 26.09 N
ATOM 23 C4 A B1040 42.442 101.805 98.305 1.00 26.55 C
ATOM 24 P A B1041 37.539 101.048 102.943 1.00 29.07 P
ATOM 25 OP1 A B1041 36.130 101.297 103.315 1.00 29.12 O
ATOM 26 OP2 A B1041 38.629 101.708 103.695 1.00 28.35 O
ATOM 27 O5' A B1041 37.776 99.483 102.955 1.00 27.75 O
TER
Atoms:
C2: (37.946,105.929,108.384)
OP1: (34.163,110.736,103.703)
OP2: (33.155,108.989,105.301)
C4: (35.801,105.944,109.298)
O5': (35.566,109.084,104.986)
C3': (37.242,106.938,104.206)
C1': (38.420,107.084,106.233)
O4': (38.132,108.398,105.785)
C5': (36.694,109.412,104.175)
P: (34.237,109.945,104.969)
O2: (39.145,105.594,108.419)
C4': (37.747,108.367,104.383)
C2': (38.266,106.167,105.023)
O2': (39.522,106.066,104.367)
N1: (37.477,106.710,107.309)
N3: (37.080,105.560,109.358)
N4: (34.990,105.564,110.285)
C6: (36.165,107.096,107.264)
C5: (35.301,106.738,108.225)
O3': (37.176,106.406,102.873)
OP1: (34.163,110.736,103.703)
OP2: (33.155,108.989,105.301)
C4: (35.801,105.944,109.298)
O5': (35.566,109.084,104.986)
C3': (37.242,106.938,104.206)
C1': (38.420,107.084,106.233)
O4': (38.132,108.398,105.785)
C5': (36.694,109.412,104.175)
P: (34.237,109.945,104.969)
O2: (39.145,105.594,108.419)
C4': (37.747,108.367,104.383)
C2': (38.266,106.167,105.023)
O2': (39.522,106.066,104.367)
N1: (37.477,106.710,107.309)
N3: (37.080,105.560,109.358)
N4: (34.990,105.564,110.285)
C6: (36.165,107.096,107.264)
C5: (35.301,106.738,108.225)
O3': (37.176,106.406,102.873)
OP1: (39.231,107.701,102.254)
OP2: (37.103,107.870,100.827)
C3': (38.858,102.030,100.909)
C1': (40.102,102.441,98.952)
C5': (38.605,104.508,101.451)
O4': (39.598,103.674,99.429)
C8: (42.318,103.052,100.098)
O2': (38.272,100.872,98.858)
C6: (44.785,101.556,98.098)
C5: (43.693,102.090,98.799)
C4: (42.442,101.805,98.305)
P: (38.020,107.067,101.680)
C4': (38.568,103.428,100.401)
C2': (39.345,101.315,99.662)
C2: (43.252,100.635,96.643)
N1: (44.521,100.825,96.996)
N3: (42.150,101.070,97.224)
N6: (46.058,101.720,98.461)
N7: (43.604,102.879,99.935)
N9: (41.555,102.438,99.137)
O5': (38.500,105.803,100.839)
O3': (37.669,101.431,101.394)
OP2: (37.103,107.870,100.827)
C3': (38.858,102.030,100.909)
C1': (40.102,102.441,98.952)
C5': (38.605,104.508,101.451)
O4': (39.598,103.674,99.429)
C8: (42.318,103.052,100.098)
O2': (38.272,100.872,98.858)
C6: (44.785,101.556,98.098)
C5: (43.693,102.090,98.799)
C4: (42.442,101.805,98.305)
P: (38.020,107.067,101.680)
C4': (38.568,103.428,100.401)
C2': (39.345,101.315,99.662)
C2: (43.252,100.635,96.643)
N1: (44.521,100.825,96.996)
N3: (42.150,101.070,97.224)
N6: (46.058,101.720,98.461)
N7: (43.604,102.879,99.935)
N9: (41.555,102.438,99.137)
O5': (38.500,105.803,100.839)
O3': (37.669,101.431,101.394)
Image (generated by PyMOL):