Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11550:11540
Extra
PDB:
ATOM 1 O3' A A1549 37.297 40.799 128.473 1.00 61.76 O
ATOM 2 P U A1550 35.896 40.904 127.675 1.00 62.00 P
ATOM 3 OP1 U A1550 35.669 39.566 126.995 1.00 61.29 O
ATOM 4 OP2 U A1550 35.929 42.159 126.838 1.00 62.09 O
ATOM 5 O5' U A1550 34.853 41.095 128.864 1.00 62.56 O
ATOM 6 C5' U A1550 34.875 42.267 129.652 1.00 63.28 C
ATOM 7 C4' U A1550 34.505 41.984 131.074 1.00 63.79 C
ATOM 8 O4' U A1550 33.090 41.710 131.144 1.00 63.74 O
ATOM 9 C3' U A1550 35.217 40.785 131.730 1.00 63.66 C
ATOM 10 O3' U A1550 35.650 41.120 133.044 1.00 64.34 O
ATOM 11 C2' U A1550 34.099 39.771 131.870 1.00 63.39 C
ATOM 12 O2' U A1550 34.244 38.916 132.974 1.00 63.59 O
ATOM 13 C1' U A1550 32.903 40.673 132.050 1.00 63.78 C
ATOM 14 N1 U A1550 31.627 40.028 131.794 1.00 63.47 N
ATOM 15 C2 U A1550 30.639 40.456 132.596 1.00 63.98 C
ATOM 16 O2 U A1550 30.796 41.319 133.391 1.00 64.62 O
ATOM 17 N3 U A1550 29.462 39.866 132.419 1.00 63.74 N
ATOM 18 C4 U A1550 29.175 38.873 131.518 1.00 63.03 C
ATOM 19 O4 U A1550 28.018 38.440 131.490 1.00 62.92 O
ATOM 20 C5 U A1550 30.267 38.451 130.723 1.00 62.53 C
ATOM 21 C6 U A1550 31.447 39.026 130.904 1.00 62.77 C
ATOM 22 P U A1551 37.007 41.943 133.327 1.00 63.47 P
ATOM 23 OP1 U A1551 36.604 43.242 133.902 1.00 64.17 O
ATOM 24 OP2 U A1551 37.814 41.932 132.120 1.00 62.94 O
ATOM 25 O5' U A1551 37.700 41.068 134.443 1.00 63.67 O
TER
ATOM 1 O3' U B1539 28.200 40.605 136.742 1.00 60.67 O
ATOM 2 P C B1540 27.222 40.504 135.489 1.00 59.80 P
ATOM 3 OP1 C B1540 25.966 39.918 135.953 1.00 59.86 O
ATOM 4 OP2 C B1540 27.953 39.832 134.419 1.00 59.07 O
ATOM 5 O5' C B1540 27.001 42.012 135.118 1.00 60.16 O
ATOM 6 C5' C B1540 28.100 42.823 134.750 1.00 60.24 C
ATOM 7 C4' C B1540 28.109 44.129 135.497 1.00 61.04 C
ATOM 8 O4' C B1540 28.684 43.939 136.817 1.00 61.55 O
ATOM 9 C3' C B1540 28.954 45.222 134.886 1.00 61.13 C
ATOM 10 O3' C B1540 28.289 45.887 133.837 1.00 60.93 O
ATOM 11 C2' C B1540 29.273 46.118 136.084 1.00 62.00 C
ATOM 12 O2' C B1540 28.185 46.985 136.357 1.00 62.48 O
ATOM 13 C1' C B1540 29.379 45.100 137.218 1.00 62.14 C
ATOM 14 N1 C B1540 30.750 44.713 137.497 1.00 62.09 N
ATOM 15 C2 C B1540 31.569 45.501 138.275 1.00 62.73 C
ATOM 16 O2 C B1540 31.100 46.546 138.694 1.00 63.33 O
ATOM 17 N3 C B1540 32.840 45.120 138.558 1.00 62.71 N
ATOM 18 C4 C B1540 33.262 43.956 138.085 1.00 62.06 C
ATOM 19 N4 C B1540 34.498 43.590 138.366 1.00 62.05 N
ATOM 20 C5 C B1540 32.425 43.116 137.299 1.00 61.40 C
ATOM 21 C6 C B1540 31.185 43.516 137.038 1.00 61.44 C
ATOM 22 P C B1541 29.049 46.142 132.470 1.00 66.88 P
ATOM 23 OP1 C B1541 28.065 45.956 131.400 1.00 66.38 O
ATOM 24 OP2 C B1541 30.281 45.307 132.497 1.00 66.55 O
ATOM 25 O5' C B1541 29.447 47.672 132.562 1.00 67.48 O
TER
ATOM 2 P U A1550 35.896 40.904 127.675 1.00 62.00 P
ATOM 3 OP1 U A1550 35.669 39.566 126.995 1.00 61.29 O
ATOM 4 OP2 U A1550 35.929 42.159 126.838 1.00 62.09 O
ATOM 5 O5' U A1550 34.853 41.095 128.864 1.00 62.56 O
ATOM 6 C5' U A1550 34.875 42.267 129.652 1.00 63.28 C
ATOM 7 C4' U A1550 34.505 41.984 131.074 1.00 63.79 C
ATOM 8 O4' U A1550 33.090 41.710 131.144 1.00 63.74 O
ATOM 9 C3' U A1550 35.217 40.785 131.730 1.00 63.66 C
ATOM 10 O3' U A1550 35.650 41.120 133.044 1.00 64.34 O
ATOM 11 C2' U A1550 34.099 39.771 131.870 1.00 63.39 C
ATOM 12 O2' U A1550 34.244 38.916 132.974 1.00 63.59 O
ATOM 13 C1' U A1550 32.903 40.673 132.050 1.00 63.78 C
ATOM 14 N1 U A1550 31.627 40.028 131.794 1.00 63.47 N
ATOM 15 C2 U A1550 30.639 40.456 132.596 1.00 63.98 C
ATOM 16 O2 U A1550 30.796 41.319 133.391 1.00 64.62 O
ATOM 17 N3 U A1550 29.462 39.866 132.419 1.00 63.74 N
ATOM 18 C4 U A1550 29.175 38.873 131.518 1.00 63.03 C
ATOM 19 O4 U A1550 28.018 38.440 131.490 1.00 62.92 O
ATOM 20 C5 U A1550 30.267 38.451 130.723 1.00 62.53 C
ATOM 21 C6 U A1550 31.447 39.026 130.904 1.00 62.77 C
ATOM 22 P U A1551 37.007 41.943 133.327 1.00 63.47 P
ATOM 23 OP1 U A1551 36.604 43.242 133.902 1.00 64.17 O
ATOM 24 OP2 U A1551 37.814 41.932 132.120 1.00 62.94 O
ATOM 25 O5' U A1551 37.700 41.068 134.443 1.00 63.67 O
TER
ATOM 1 O3' U B1539 28.200 40.605 136.742 1.00 60.67 O
ATOM 2 P C B1540 27.222 40.504 135.489 1.00 59.80 P
ATOM 3 OP1 C B1540 25.966 39.918 135.953 1.00 59.86 O
ATOM 4 OP2 C B1540 27.953 39.832 134.419 1.00 59.07 O
ATOM 5 O5' C B1540 27.001 42.012 135.118 1.00 60.16 O
ATOM 6 C5' C B1540 28.100 42.823 134.750 1.00 60.24 C
ATOM 7 C4' C B1540 28.109 44.129 135.497 1.00 61.04 C
ATOM 8 O4' C B1540 28.684 43.939 136.817 1.00 61.55 O
ATOM 9 C3' C B1540 28.954 45.222 134.886 1.00 61.13 C
ATOM 10 O3' C B1540 28.289 45.887 133.837 1.00 60.93 O
ATOM 11 C2' C B1540 29.273 46.118 136.084 1.00 62.00 C
ATOM 12 O2' C B1540 28.185 46.985 136.357 1.00 62.48 O
ATOM 13 C1' C B1540 29.379 45.100 137.218 1.00 62.14 C
ATOM 14 N1 C B1540 30.750 44.713 137.497 1.00 62.09 N
ATOM 15 C2 C B1540 31.569 45.501 138.275 1.00 62.73 C
ATOM 16 O2 C B1540 31.100 46.546 138.694 1.00 63.33 O
ATOM 17 N3 C B1540 32.840 45.120 138.558 1.00 62.71 N
ATOM 18 C4 C B1540 33.262 43.956 138.085 1.00 62.06 C
ATOM 19 N4 C B1540 34.498 43.590 138.366 1.00 62.05 N
ATOM 20 C5 C B1540 32.425 43.116 137.299 1.00 61.40 C
ATOM 21 C6 C B1540 31.185 43.516 137.038 1.00 61.44 C
ATOM 22 P C B1541 29.049 46.142 132.470 1.00 66.88 P
ATOM 23 OP1 C B1541 28.065 45.956 131.400 1.00 66.38 O
ATOM 24 OP2 C B1541 30.281 45.307 132.497 1.00 66.55 O
ATOM 25 O5' C B1541 29.447 47.672 132.562 1.00 67.48 O
TER
Atoms:
C4: (29.175,38.873,131.518)
N3: (29.462,39.866,132.419)
OP1: (35.669,39.566,126.995)
OP2: (35.929,42.159,126.838)
C2: (30.639,40.456,132.596)
C1': (32.903,40.673,132.050)
C3': (35.217,40.785,131.730)
O5': (34.853,41.095,128.864)
O4': (33.090,41.710,131.144)
C5': (34.875,42.267,129.652)
P: (35.896,40.904,127.675)
C4': (34.505,41.984,131.074)
C2': (34.099,39.771,131.870)
O2': (34.244,38.916,132.974)
N1: (31.627,40.028,131.794)
O4: (28.018,38.440,131.490)
O2: (30.796,41.319,133.391)
C6: (31.447,39.026,130.904)
C5: (30.267,38.451,130.723)
O3': (35.650,41.120,133.044)
N3: (29.462,39.866,132.419)
OP1: (35.669,39.566,126.995)
OP2: (35.929,42.159,126.838)
C2: (30.639,40.456,132.596)
C1': (32.903,40.673,132.050)
C3': (35.217,40.785,131.730)
O5': (34.853,41.095,128.864)
O4': (33.090,41.710,131.144)
C5': (34.875,42.267,129.652)
P: (35.896,40.904,127.675)
C4': (34.505,41.984,131.074)
C2': (34.099,39.771,131.870)
O2': (34.244,38.916,132.974)
N1: (31.627,40.028,131.794)
O4: (28.018,38.440,131.490)
O2: (30.796,41.319,133.391)
C6: (31.447,39.026,130.904)
C5: (30.267,38.451,130.723)
O3': (35.650,41.120,133.044)
C2: (31.569,45.501,138.275)
OP1: (25.966,39.918,135.953)
OP2: (27.953,39.832,134.419)
C4: (33.262,43.956,138.085)
O5': (27.001,42.012,135.118)
C3': (28.954,45.222,134.886)
C1': (29.379,45.100,137.218)
O4': (28.684,43.939,136.817)
C5': (28.100,42.823,134.750)
P: (27.222,40.504,135.489)
O2: (31.100,46.546,138.694)
C4': (28.109,44.129,135.497)
C2': (29.273,46.118,136.084)
O2': (28.185,46.985,136.357)
N1: (30.750,44.713,137.497)
N3: (32.840,45.120,138.558)
N4: (34.498,43.590,138.366)
C6: (31.185,43.516,137.038)
C5: (32.425,43.116,137.299)
O3': (28.289,45.887,133.837)
OP1: (25.966,39.918,135.953)
OP2: (27.953,39.832,134.419)
C4: (33.262,43.956,138.085)
O5': (27.001,42.012,135.118)
C3': (28.954,45.222,134.886)
C1': (29.379,45.100,137.218)
O4': (28.684,43.939,136.817)
C5': (28.100,42.823,134.750)
P: (27.222,40.504,135.489)
O2: (31.100,46.546,138.694)
C4': (28.109,44.129,135.497)
C2': (29.273,46.118,136.084)
O2': (28.185,46.985,136.357)
N1: (30.750,44.713,137.497)
N3: (32.840,45.120,138.558)
N4: (34.498,43.590,138.366)
C6: (31.185,43.516,137.038)
C5: (32.425,43.116,137.299)
O3': (28.289,45.887,133.837)
Image (generated by PyMOL):