ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ4:01039:01040

Extra

PDB:
ATOM 1 O3' A A1038 34.796 111.553 106.559 1.00 39.99 O
ATOM 2 P C A1039 34.534 110.438 105.435 1.00 41.87 P
ATOM 3 OP1 C A1039 34.432 111.176 104.158 1.00 40.48 O
ATOM 4 OP2 C A1039 33.431 109.525 105.855 1.00 41.51 O
ATOM 5 O5' C A1039 35.859 109.568 105.435 1.00 42.97 O
ATOM 6 C5' C A1039 36.982 109.908 104.623 1.00 47.07 C
ATOM 7 C4' C A1039 38.087 108.919 104.875 1.00 49.92 C
ATOM 8 O4' C A1039 38.495 109.042 106.267 1.00 51.76 O
ATOM 9 C3' C A1039 37.672 107.456 104.785 1.00 51.56 C
ATOM 10 O3' C A1039 37.594 106.852 103.497 1.00 53.05 O
ATOM 11 C2' C A1039 38.778 106.811 105.598 1.00 52.82 C
ATOM 12 O2' C A1039 40.034 106.853 104.940 1.00 51.39 O
ATOM 13 C1' C A1039 38.822 107.758 106.788 1.00 51.21 C
ATOM 14 N1 C A1039 37.801 107.359 107.785 1.00 51.44 N
ATOM 15 C2 C A1039 38.172 106.483 108.822 1.00 51.92 C
ATOM 16 O2 C A1039 39.333 106.054 108.860 1.00 55.63 O
ATOM 17 N3 C A1039 37.251 106.125 109.752 1.00 49.39 N
ATOM 18 C4 C A1039 36.005 106.599 109.672 1.00 48.31 C
ATOM 19 N4 C A1039 35.135 106.237 110.618 1.00 46.43 N
ATOM 20 C5 C A1039 35.596 107.471 108.618 1.00 49.18 C
ATOM 21 C6 C A1039 36.515 107.823 107.708 1.00 49.44 C
ATOM 22 P A A1040 38.257 107.557 102.220 1.00 54.83 P
ATOM 23 OP1 A A1040 39.509 108.242 102.645 1.00 56.61 O
ATOM 24 OP2 A A1040 37.207 108.318 101.499 1.00 53.50 O
ATOM 25 O5' A A1040 38.704 106.315 101.332 1.00 48.72 O
TER

ATOM 1 O3' C B1039 37.594 106.852 103.497 1.00 53.05 O
ATOM 2 P A B1040 38.257 107.557 102.220 1.00 54.83 P
ATOM 3 OP1 A B1040 39.509 108.242 102.645 1.00 56.61 O
ATOM 4 OP2 A B1040 37.207 108.318 101.499 1.00 53.50 O
ATOM 5 O5' A B1040 38.704 106.315 101.332 1.00 48.72 O
ATOM 6 C5' A B1040 38.920 105.030 101.927 1.00 38.77 C
ATOM 7 C4' A B1040 38.891 103.973 100.866 1.00 37.72 C
ATOM 8 O4' A B1040 39.934 104.241 99.905 1.00 36.77 O
ATOM 9 C3' A B1040 39.166 102.564 101.342 1.00 38.69 C
ATOM 10 O3' A B1040 37.956 101.992 101.808 1.00 39.29 O
ATOM 11 C2' A B1040 39.652 101.887 100.067 1.00 39.74 C
ATOM 12 O2' A B1040 38.591 101.548 99.200 1.00 43.12 O
ATOM 13 C1' A B1040 40.435 103.019 99.400 1.00 37.35 C
ATOM 14 N9 A B1040 41.891 102.988 99.580 1.00 35.70 N
ATOM 15 C8 A B1040 42.653 103.566 100.566 1.00 33.05 C
ATOM 16 N7 A B1040 43.942 103.389 100.407 1.00 33.18 N
ATOM 17 C5 A B1040 44.037 102.630 99.246 1.00 34.59 C
ATOM 18 C6 A B1040 45.140 102.099 98.528 1.00 33.99 C
ATOM 19 N6 A B1040 46.414 102.247 98.890 1.00 27.39 N
ATOM 20 N1 A B1040 44.875 101.392 97.407 1.00 35.10 N
ATOM 21 C2 A B1040 43.606 101.221 97.044 1.00 32.40 C
ATOM 22 N3 A B1040 42.498 101.660 97.629 1.00 34.78 N
ATOM 23 C4 A B1040 42.782 102.368 98.734 1.00 34.75 C
ATOM 24 P A B1041 37.802 101.577 103.350 1.00 39.40 P
ATOM 25 OP1 A B1041 36.367 101.792 103.675 1.00 40.25 O
ATOM 26 OP2 A B1041 38.845 102.221 104.181 1.00 41.04 O
ATOM 27 O5' A B1041 38.104 100.018 103.349 1.00 39.18 O
TER

Atoms:
C2: (38.172,106.483,108.822)
OP1: (34.432,111.176,104.158)
OP2: (33.431,109.525,105.855)
C4: (36.005,106.599,109.672)
O5': (35.859,109.568,105.435)
C3': (37.672,107.456,104.785)
C1': (38.822,107.758,106.788)
O4': (38.495,109.042,106.267)
C5': (36.982,109.908,104.623)
P: (34.534,110.438,105.435)
O2: (39.333,106.054,108.860)
C4': (38.087,108.919,104.875)
C2': (38.778,106.811,105.598)
O2': (40.034,106.853,104.940)
N1: (37.801,107.359,107.785)
N3: (37.251,106.125,109.752)
N4: (35.135,106.237,110.618)
C6: (36.515,107.823,107.708)
C5: (35.596,107.471,108.618)
O3': (37.594,106.852,103.497)
OP1: (39.509,108.242,102.645)
OP2: (37.207,108.318,101.499)
C3': (39.166,102.564,101.342)
C1': (40.435,103.019,99.400)
C5': (38.920,105.030,101.927)
O4': (39.934,104.241,99.905)
C8: (42.653,103.566,100.566)
O2': (38.591,101.548,99.200)
C6: (45.140,102.099,98.528)
C5: (44.037,102.630,99.246)
C4: (42.782,102.368,98.734)
P: (38.257,107.557,102.220)
C4': (38.891,103.973,100.866)
C2': (39.652,101.887,100.067)
C2: (43.606,101.221,97.044)
N1: (44.875,101.392,97.407)
N3: (42.498,101.660,97.629)
N6: (46.414,102.247,98.890)
N7: (43.942,103.389,100.407)
N9: (41.891,102.988,99.580)
O5': (38.704,106.315,101.332)
O3': (37.956,101.992,101.808)
Image (generated by PyMOL):
PyMOL image
show in jmol