Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ6:01039:01040
Extra
PDB:
ATOM 1 O3' A A1038 34.462 111.018 106.155 1.00 48.63 O
ATOM 2 P C A1039 34.168 109.905 105.038 1.00 48.10 P
ATOM 3 OP1 C A1039 34.075 110.649 103.763 1.00 47.15 O
ATOM 4 OP2 C A1039 33.040 109.031 105.471 1.00 49.92 O
ATOM 5 O5' C A1039 35.455 108.971 105.029 1.00 51.92 O
ATOM 6 C5' C A1039 36.599 109.250 104.214 1.00 55.24 C
ATOM 7 C4' C A1039 37.725 108.331 104.614 1.00 58.41 C
ATOM 8 O4' C A1039 37.943 108.511 106.045 1.00 59.89 O
ATOM 9 C3' C A1039 37.417 106.843 104.525 1.00 60.20 C
ATOM 10 O3' C A1039 37.645 106.153 103.306 1.00 62.35 O
ATOM 11 C2' C A1039 38.446 106.287 105.492 1.00 62.13 C
ATOM 12 O2' C A1039 39.764 106.332 104.961 1.00 60.54 O
ATOM 13 C1' C A1039 38.316 107.274 106.639 1.00 60.62 C
ATOM 14 N1 C A1039 37.249 106.833 107.563 1.00 62.27 N
ATOM 15 C2 C A1039 37.578 105.968 108.630 1.00 64.00 C
ATOM 16 O2 C A1039 38.751 105.579 108.762 1.00 66.60 O
ATOM 17 N3 C A1039 36.607 105.578 109.485 1.00 63.75 N
ATOM 18 C4 C A1039 35.353 106.008 109.312 1.00 63.54 C
ATOM 19 N4 C A1039 34.429 105.620 110.197 1.00 62.41 N
ATOM 20 C5 C A1039 34.990 106.862 108.231 1.00 62.95 C
ATOM 21 C6 C A1039 35.958 107.248 107.392 1.00 61.76 C
ATOM 22 P A A1040 37.651 106.906 101.894 1.00 61.21 P
ATOM 23 OP1 A A1040 38.729 107.919 101.926 1.00 64.00 O
ATOM 24 OP2 A A1040 36.272 107.304 101.520 1.00 63.96 O
ATOM 25 O5' A A1040 38.125 105.726 100.935 1.00 56.36 O
TER
ATOM 1 O3' C B1039 37.645 106.153 103.306 1.00 62.35 O
ATOM 2 P A B1040 37.651 106.906 101.894 1.00 61.21 P
ATOM 3 OP1 A B1040 38.729 107.919 101.926 1.00 64.00 O
ATOM 4 OP2 A B1040 36.272 107.304 101.520 1.00 63.96 O
ATOM 5 O5' A B1040 38.125 105.726 100.935 1.00 56.36 O
ATOM 6 C5' A B1040 38.412 104.431 101.490 1.00 46.86 C
ATOM 7 C4' A B1040 38.427 103.391 100.417 1.00 45.35 C
ATOM 8 O4' A B1040 39.497 103.676 99.492 1.00 44.31 O
ATOM 9 C3' A B1040 38.726 101.992 100.910 1.00 46.35 C
ATOM 10 O3' A B1040 37.512 101.385 101.348 1.00 48.02 O
ATOM 11 C2' A B1040 39.254 101.316 99.652 1.00 45.80 C
ATOM 12 O2' A B1040 38.215 100.912 98.786 1.00 47.43 O
ATOM 13 C1' A B1040 40.013 102.464 98.984 1.00 44.60 C
ATOM 14 N9 A B1040 41.464 102.462 99.169 1.00 44.30 N
ATOM 15 C8 A B1040 42.195 103.061 100.164 1.00 43.42 C
ATOM 16 N7 A B1040 43.486 102.895 100.039 1.00 44.47 N
ATOM 17 C5 A B1040 43.616 102.131 98.887 1.00 44.29 C
ATOM 18 C6 A B1040 44.737 101.611 98.213 1.00 44.69 C
ATOM 19 N6 A B1040 45.993 101.788 98.617 1.00 43.03 N
ATOM 20 N1 A B1040 44.518 100.888 97.093 1.00 45.60 N
ATOM 21 C2 A B1040 43.261 100.703 96.689 1.00 43.16 C
ATOM 22 N3 A B1040 42.132 101.137 97.237 1.00 43.42 N
ATOM 23 C4 A B1040 42.380 101.854 98.345 1.00 43.52 C
ATOM 24 P A B1041 37.271 101.081 102.907 1.00 42.94 P
ATOM 25 OP1 A B1041 35.821 101.325 103.142 1.00 45.11 O
ATOM 26 OP2 A B1041 38.278 101.787 103.738 1.00 45.88 O
ATOM 27 O5' A B1041 37.529 99.519 103.020 1.00 44.09 O
TER
ATOM 2 P C A1039 34.168 109.905 105.038 1.00 48.10 P
ATOM 3 OP1 C A1039 34.075 110.649 103.763 1.00 47.15 O
ATOM 4 OP2 C A1039 33.040 109.031 105.471 1.00 49.92 O
ATOM 5 O5' C A1039 35.455 108.971 105.029 1.00 51.92 O
ATOM 6 C5' C A1039 36.599 109.250 104.214 1.00 55.24 C
ATOM 7 C4' C A1039 37.725 108.331 104.614 1.00 58.41 C
ATOM 8 O4' C A1039 37.943 108.511 106.045 1.00 59.89 O
ATOM 9 C3' C A1039 37.417 106.843 104.525 1.00 60.20 C
ATOM 10 O3' C A1039 37.645 106.153 103.306 1.00 62.35 O
ATOM 11 C2' C A1039 38.446 106.287 105.492 1.00 62.13 C
ATOM 12 O2' C A1039 39.764 106.332 104.961 1.00 60.54 O
ATOM 13 C1' C A1039 38.316 107.274 106.639 1.00 60.62 C
ATOM 14 N1 C A1039 37.249 106.833 107.563 1.00 62.27 N
ATOM 15 C2 C A1039 37.578 105.968 108.630 1.00 64.00 C
ATOM 16 O2 C A1039 38.751 105.579 108.762 1.00 66.60 O
ATOM 17 N3 C A1039 36.607 105.578 109.485 1.00 63.75 N
ATOM 18 C4 C A1039 35.353 106.008 109.312 1.00 63.54 C
ATOM 19 N4 C A1039 34.429 105.620 110.197 1.00 62.41 N
ATOM 20 C5 C A1039 34.990 106.862 108.231 1.00 62.95 C
ATOM 21 C6 C A1039 35.958 107.248 107.392 1.00 61.76 C
ATOM 22 P A A1040 37.651 106.906 101.894 1.00 61.21 P
ATOM 23 OP1 A A1040 38.729 107.919 101.926 1.00 64.00 O
ATOM 24 OP2 A A1040 36.272 107.304 101.520 1.00 63.96 O
ATOM 25 O5' A A1040 38.125 105.726 100.935 1.00 56.36 O
TER
ATOM 1 O3' C B1039 37.645 106.153 103.306 1.00 62.35 O
ATOM 2 P A B1040 37.651 106.906 101.894 1.00 61.21 P
ATOM 3 OP1 A B1040 38.729 107.919 101.926 1.00 64.00 O
ATOM 4 OP2 A B1040 36.272 107.304 101.520 1.00 63.96 O
ATOM 5 O5' A B1040 38.125 105.726 100.935 1.00 56.36 O
ATOM 6 C5' A B1040 38.412 104.431 101.490 1.00 46.86 C
ATOM 7 C4' A B1040 38.427 103.391 100.417 1.00 45.35 C
ATOM 8 O4' A B1040 39.497 103.676 99.492 1.00 44.31 O
ATOM 9 C3' A B1040 38.726 101.992 100.910 1.00 46.35 C
ATOM 10 O3' A B1040 37.512 101.385 101.348 1.00 48.02 O
ATOM 11 C2' A B1040 39.254 101.316 99.652 1.00 45.80 C
ATOM 12 O2' A B1040 38.215 100.912 98.786 1.00 47.43 O
ATOM 13 C1' A B1040 40.013 102.464 98.984 1.00 44.60 C
ATOM 14 N9 A B1040 41.464 102.462 99.169 1.00 44.30 N
ATOM 15 C8 A B1040 42.195 103.061 100.164 1.00 43.42 C
ATOM 16 N7 A B1040 43.486 102.895 100.039 1.00 44.47 N
ATOM 17 C5 A B1040 43.616 102.131 98.887 1.00 44.29 C
ATOM 18 C6 A B1040 44.737 101.611 98.213 1.00 44.69 C
ATOM 19 N6 A B1040 45.993 101.788 98.617 1.00 43.03 N
ATOM 20 N1 A B1040 44.518 100.888 97.093 1.00 45.60 N
ATOM 21 C2 A B1040 43.261 100.703 96.689 1.00 43.16 C
ATOM 22 N3 A B1040 42.132 101.137 97.237 1.00 43.42 N
ATOM 23 C4 A B1040 42.380 101.854 98.345 1.00 43.52 C
ATOM 24 P A B1041 37.271 101.081 102.907 1.00 42.94 P
ATOM 25 OP1 A B1041 35.821 101.325 103.142 1.00 45.11 O
ATOM 26 OP2 A B1041 38.278 101.787 103.738 1.00 45.88 O
ATOM 27 O5' A B1041 37.529 99.519 103.020 1.00 44.09 O
TER
Atoms:
C2: (37.578,105.968,108.630)
OP1: (34.075,110.649,103.763)
OP2: (33.040,109.031,105.471)
C4: (35.353,106.008,109.312)
O5': (35.455,108.971,105.029)
C3': (37.417,106.843,104.525)
C1': (38.316,107.274,106.639)
O4': (37.943,108.511,106.045)
C5': (36.599,109.250,104.214)
P: (34.168,109.905,105.038)
O2: (38.751,105.579,108.762)
C4': (37.725,108.331,104.614)
C2': (38.446,106.287,105.492)
O2': (39.764,106.332,104.961)
N1: (37.249,106.833,107.563)
N3: (36.607,105.578,109.485)
N4: (34.429,105.620,110.197)
C6: (35.958,107.248,107.392)
C5: (34.990,106.862,108.231)
O3': (37.645,106.153,103.306)
OP1: (34.075,110.649,103.763)
OP2: (33.040,109.031,105.471)
C4: (35.353,106.008,109.312)
O5': (35.455,108.971,105.029)
C3': (37.417,106.843,104.525)
C1': (38.316,107.274,106.639)
O4': (37.943,108.511,106.045)
C5': (36.599,109.250,104.214)
P: (34.168,109.905,105.038)
O2: (38.751,105.579,108.762)
C4': (37.725,108.331,104.614)
C2': (38.446,106.287,105.492)
O2': (39.764,106.332,104.961)
N1: (37.249,106.833,107.563)
N3: (36.607,105.578,109.485)
N4: (34.429,105.620,110.197)
C6: (35.958,107.248,107.392)
C5: (34.990,106.862,108.231)
O3': (37.645,106.153,103.306)
OP1: (38.729,107.919,101.926)
OP2: (36.272,107.304,101.520)
C3': (38.726,101.992,100.910)
C1': (40.013,102.464,98.984)
C5': (38.412,104.431,101.490)
O4': (39.497,103.676,99.492)
C8: (42.195,103.061,100.164)
O2': (38.215,100.912,98.786)
C6: (44.737,101.611,98.213)
C5: (43.616,102.131,98.887)
C4: (42.380,101.854,98.345)
P: (37.651,106.906,101.894)
C4': (38.427,103.391,100.417)
C2': (39.254,101.316,99.652)
C2: (43.261,100.703,96.689)
N1: (44.518,100.888,97.093)
N3: (42.132,101.137,97.237)
N6: (45.993,101.788,98.617)
N7: (43.486,102.895,100.039)
N9: (41.464,102.462,99.169)
O5': (38.125,105.726,100.935)
O3': (37.512,101.385,101.348)
OP2: (36.272,107.304,101.520)
C3': (38.726,101.992,100.910)
C1': (40.013,102.464,98.984)
C5': (38.412,104.431,101.490)
O4': (39.497,103.676,99.492)
C8: (42.195,103.061,100.164)
O2': (38.215,100.912,98.786)
C6: (44.737,101.611,98.213)
C5: (43.616,102.131,98.887)
C4: (42.380,101.854,98.345)
P: (37.651,106.906,101.894)
C4': (38.427,103.391,100.417)
C2': (39.254,101.316,99.652)
C2: (43.261,100.703,96.689)
N1: (44.518,100.888,97.093)
N3: (42.132,101.137,97.237)
N6: (45.993,101.788,98.617)
N7: (43.486,102.895,100.039)
N9: (41.464,102.462,99.169)
O5': (38.125,105.726,100.935)
O3': (37.512,101.385,101.348)
Image (generated by PyMOL):