Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ8:01039:01040
Extra
PDB:
ATOM 1 O3' A A1038 34.758 109.983 106.489 1.00 40.21 O
ATOM 2 P C A1039 34.303 108.873 105.417 1.00 41.12 P
ATOM 3 OP1 C A1039 33.995 109.653 104.194 1.00 40.01 O
ATOM 4 OP2 C A1039 33.271 107.977 106.002 1.00 42.01 O
ATOM 5 O5' C A1039 35.600 107.990 105.154 1.00 43.96 O
ATOM 6 C5' C A1039 36.865 108.582 104.794 1.00 46.12 C
ATOM 7 C4' C A1039 37.990 107.698 105.279 1.00 48.02 C
ATOM 8 O4' C A1039 37.935 107.621 106.724 1.00 49.20 O
ATOM 9 C3' C A1039 37.885 106.256 104.817 1.00 49.82 C
ATOM 10 O3' C A1039 38.540 106.116 103.568 1.00 51.73 O
ATOM 11 C2' C A1039 38.624 105.488 105.908 1.00 52.02 C
ATOM 12 O2' C A1039 40.034 105.494 105.743 1.00 55.12 O
ATOM 13 C1' C A1039 38.283 106.316 107.148 1.00 49.74 C
ATOM 14 N1 C A1039 37.217 105.815 108.033 1.00 47.76 N
ATOM 15 C2 C A1039 37.571 105.023 109.135 1.00 48.12 C
ATOM 16 O2 C A1039 38.756 104.663 109.266 1.00 51.02 O
ATOM 17 N3 C A1039 36.618 104.673 110.030 1.00 46.89 N
ATOM 18 C4 C A1039 35.359 105.075 109.854 1.00 45.62 C
ATOM 19 N4 C A1039 34.471 104.779 110.803 1.00 43.46 N
ATOM 20 C5 C A1039 34.959 105.818 108.706 1.00 46.32 C
ATOM 21 C6 C A1039 35.910 106.156 107.825 1.00 46.63 C
ATOM 22 P A A1040 37.675 105.973 102.223 1.00 54.48 P
ATOM 23 OP1 A A1040 37.705 107.296 101.542 1.00 53.66 O
ATOM 24 OP2 A A1040 36.359 105.337 102.535 1.00 53.02 O
ATOM 25 O5' A A1040 38.538 104.948 101.362 1.00 48.08 O
TER
ATOM 1 O3' C B1039 38.540 106.116 103.568 1.00 51.73 O
ATOM 2 P A B1040 37.675 105.973 102.223 1.00 54.48 P
ATOM 3 OP1 A B1040 37.705 107.296 101.542 1.00 53.66 O
ATOM 4 OP2 A B1040 36.359 105.337 102.535 1.00 53.02 O
ATOM 5 O5' A B1040 38.538 104.948 101.362 1.00 48.08 O
ATOM 6 C5' A B1040 38.792 103.625 101.848 1.00 40.69 C
ATOM 7 C4' A B1040 38.738 102.652 100.706 1.00 38.48 C
ATOM 8 O4' A B1040 39.756 103.000 99.737 1.00 34.86 O
ATOM 9 C3' A B1040 39.029 101.205 101.050 1.00 36.80 C
ATOM 10 O3' A B1040 37.836 100.589 101.535 1.00 38.82 O
ATOM 11 C2' A B1040 39.438 100.647 99.691 1.00 36.09 C
ATOM 12 O2' A B1040 38.323 100.441 98.851 1.00 37.99 O
ATOM 13 C1' A B1040 40.208 101.828 99.092 1.00 34.21 C
ATOM 14 N9 A B1040 41.664 101.758 99.206 1.00 31.27 N
ATOM 15 C8 A B1040 42.471 102.326 100.157 1.00 30.48 C
ATOM 16 N7 A B1040 43.750 102.101 99.967 1.00 32.15 N
ATOM 17 C5 A B1040 43.785 101.321 98.818 1.00 29.88 C
ATOM 18 C6 A B1040 44.845 100.731 98.104 1.00 30.32 C
ATOM 19 N6 A B1040 46.130 100.836 98.463 1.00 28.38 N
ATOM 20 N1 A B1040 44.537 100.009 96.998 1.00 31.52 N
ATOM 21 C2 A B1040 43.252 99.891 96.654 1.00 30.12 C
ATOM 22 N3 A B1040 42.169 100.392 97.252 1.00 29.55 N
ATOM 23 C4 A B1040 42.509 101.102 98.340 1.00 29.57 C
ATOM 24 P A B1041 37.686 100.218 103.101 1.00 35.74 P
ATOM 25 OP1 A B1041 36.282 100.540 103.464 1.00 37.65 O
ATOM 26 OP2 A B1041 38.797 100.816 103.893 1.00 35.26 O
ATOM 27 O5' A B1041 37.872 98.640 103.116 1.00 35.10 O
TER
ATOM 2 P C A1039 34.303 108.873 105.417 1.00 41.12 P
ATOM 3 OP1 C A1039 33.995 109.653 104.194 1.00 40.01 O
ATOM 4 OP2 C A1039 33.271 107.977 106.002 1.00 42.01 O
ATOM 5 O5' C A1039 35.600 107.990 105.154 1.00 43.96 O
ATOM 6 C5' C A1039 36.865 108.582 104.794 1.00 46.12 C
ATOM 7 C4' C A1039 37.990 107.698 105.279 1.00 48.02 C
ATOM 8 O4' C A1039 37.935 107.621 106.724 1.00 49.20 O
ATOM 9 C3' C A1039 37.885 106.256 104.817 1.00 49.82 C
ATOM 10 O3' C A1039 38.540 106.116 103.568 1.00 51.73 O
ATOM 11 C2' C A1039 38.624 105.488 105.908 1.00 52.02 C
ATOM 12 O2' C A1039 40.034 105.494 105.743 1.00 55.12 O
ATOM 13 C1' C A1039 38.283 106.316 107.148 1.00 49.74 C
ATOM 14 N1 C A1039 37.217 105.815 108.033 1.00 47.76 N
ATOM 15 C2 C A1039 37.571 105.023 109.135 1.00 48.12 C
ATOM 16 O2 C A1039 38.756 104.663 109.266 1.00 51.02 O
ATOM 17 N3 C A1039 36.618 104.673 110.030 1.00 46.89 N
ATOM 18 C4 C A1039 35.359 105.075 109.854 1.00 45.62 C
ATOM 19 N4 C A1039 34.471 104.779 110.803 1.00 43.46 N
ATOM 20 C5 C A1039 34.959 105.818 108.706 1.00 46.32 C
ATOM 21 C6 C A1039 35.910 106.156 107.825 1.00 46.63 C
ATOM 22 P A A1040 37.675 105.973 102.223 1.00 54.48 P
ATOM 23 OP1 A A1040 37.705 107.296 101.542 1.00 53.66 O
ATOM 24 OP2 A A1040 36.359 105.337 102.535 1.00 53.02 O
ATOM 25 O5' A A1040 38.538 104.948 101.362 1.00 48.08 O
TER
ATOM 1 O3' C B1039 38.540 106.116 103.568 1.00 51.73 O
ATOM 2 P A B1040 37.675 105.973 102.223 1.00 54.48 P
ATOM 3 OP1 A B1040 37.705 107.296 101.542 1.00 53.66 O
ATOM 4 OP2 A B1040 36.359 105.337 102.535 1.00 53.02 O
ATOM 5 O5' A B1040 38.538 104.948 101.362 1.00 48.08 O
ATOM 6 C5' A B1040 38.792 103.625 101.848 1.00 40.69 C
ATOM 7 C4' A B1040 38.738 102.652 100.706 1.00 38.48 C
ATOM 8 O4' A B1040 39.756 103.000 99.737 1.00 34.86 O
ATOM 9 C3' A B1040 39.029 101.205 101.050 1.00 36.80 C
ATOM 10 O3' A B1040 37.836 100.589 101.535 1.00 38.82 O
ATOM 11 C2' A B1040 39.438 100.647 99.691 1.00 36.09 C
ATOM 12 O2' A B1040 38.323 100.441 98.851 1.00 37.99 O
ATOM 13 C1' A B1040 40.208 101.828 99.092 1.00 34.21 C
ATOM 14 N9 A B1040 41.664 101.758 99.206 1.00 31.27 N
ATOM 15 C8 A B1040 42.471 102.326 100.157 1.00 30.48 C
ATOM 16 N7 A B1040 43.750 102.101 99.967 1.00 32.15 N
ATOM 17 C5 A B1040 43.785 101.321 98.818 1.00 29.88 C
ATOM 18 C6 A B1040 44.845 100.731 98.104 1.00 30.32 C
ATOM 19 N6 A B1040 46.130 100.836 98.463 1.00 28.38 N
ATOM 20 N1 A B1040 44.537 100.009 96.998 1.00 31.52 N
ATOM 21 C2 A B1040 43.252 99.891 96.654 1.00 30.12 C
ATOM 22 N3 A B1040 42.169 100.392 97.252 1.00 29.55 N
ATOM 23 C4 A B1040 42.509 101.102 98.340 1.00 29.57 C
ATOM 24 P A B1041 37.686 100.218 103.101 1.00 35.74 P
ATOM 25 OP1 A B1041 36.282 100.540 103.464 1.00 37.65 O
ATOM 26 OP2 A B1041 38.797 100.816 103.893 1.00 35.26 O
ATOM 27 O5' A B1041 37.872 98.640 103.116 1.00 35.10 O
TER
Atoms:
C2: (37.571,105.023,109.135)
OP1: (33.995,109.653,104.194)
OP2: (33.271,107.977,106.002)
C4: (35.359,105.075,109.854)
O5': (35.600,107.990,105.154)
C3': (37.885,106.256,104.817)
C1': (38.283,106.316,107.148)
O4': (37.935,107.621,106.724)
C5': (36.865,108.582,104.794)
P: (34.303,108.873,105.417)
O2: (38.756,104.663,109.266)
C4': (37.990,107.698,105.279)
C2': (38.624,105.488,105.908)
O2': (40.034,105.494,105.743)
N1: (37.217,105.815,108.033)
N3: (36.618,104.673,110.030)
N4: (34.471,104.779,110.803)
C6: (35.910,106.156,107.825)
C5: (34.959,105.818,108.706)
O3': (38.540,106.116,103.568)
OP1: (33.995,109.653,104.194)
OP2: (33.271,107.977,106.002)
C4: (35.359,105.075,109.854)
O5': (35.600,107.990,105.154)
C3': (37.885,106.256,104.817)
C1': (38.283,106.316,107.148)
O4': (37.935,107.621,106.724)
C5': (36.865,108.582,104.794)
P: (34.303,108.873,105.417)
O2: (38.756,104.663,109.266)
C4': (37.990,107.698,105.279)
C2': (38.624,105.488,105.908)
O2': (40.034,105.494,105.743)
N1: (37.217,105.815,108.033)
N3: (36.618,104.673,110.030)
N4: (34.471,104.779,110.803)
C6: (35.910,106.156,107.825)
C5: (34.959,105.818,108.706)
O3': (38.540,106.116,103.568)
OP1: (37.705,107.296,101.542)
OP2: (36.359,105.337,102.535)
C3': (39.029,101.205,101.050)
C1': (40.208,101.828,99.092)
C5': (38.792,103.625,101.848)
O4': (39.756,103.000,99.737)
C8: (42.471,102.326,100.157)
O2': (38.323,100.441,98.851)
C6: (44.845,100.731,98.104)
C5: (43.785,101.321,98.818)
C4: (42.509,101.102,98.340)
P: (37.675,105.973,102.223)
C4': (38.738,102.652,100.706)
C2': (39.438,100.647,99.691)
C2: (43.252,99.891,96.654)
N1: (44.537,100.009,96.998)
N3: (42.169,100.392,97.252)
N6: (46.130,100.836,98.463)
N7: (43.750,102.101,99.967)
N9: (41.664,101.758,99.206)
O5': (38.538,104.948,101.362)
O3': (37.836,100.589,101.535)
OP2: (36.359,105.337,102.535)
C3': (39.029,101.205,101.050)
C1': (40.208,101.828,99.092)
C5': (38.792,103.625,101.848)
O4': (39.756,103.000,99.737)
C8: (42.471,102.326,100.157)
O2': (38.323,100.441,98.851)
C6: (44.845,100.731,98.104)
C5: (43.785,101.321,98.818)
C4: (42.509,101.102,98.340)
P: (37.675,105.973,102.223)
C4': (38.738,102.652,100.706)
C2': (39.438,100.647,99.691)
C2: (43.252,99.891,96.654)
N1: (44.537,100.009,96.998)
N3: (42.169,100.392,97.252)
N6: (46.130,100.836,98.463)
N7: (43.750,102.101,99.967)
N9: (41.664,101.758,99.206)
O5': (38.538,104.948,101.362)
O3': (37.836,100.589,101.535)
Image (generated by PyMOL):