Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ9:01039:01040
Extra
PDB:
ATOM 1 O3' A A1038 34.841 110.137 106.302 1.00 38.60 O
ATOM 2 P C A1039 34.406 109.011 105.244 1.00 40.17 P
ATOM 3 OP1 C A1039 34.202 109.739 103.962 1.00 39.79 O
ATOM 4 OP2 C A1039 33.309 108.189 105.807 1.00 39.63 O
ATOM 5 O5' C A1039 35.680 108.071 105.091 1.00 41.73 O
ATOM 6 C5' C A1039 36.945 108.586 104.642 1.00 44.06 C
ATOM 7 C4' C A1039 38.059 107.736 105.199 1.00 46.20 C
ATOM 8 O4' C A1039 37.963 107.744 106.644 1.00 48.30 O
ATOM 9 C3' C A1039 37.966 106.268 104.834 1.00 48.01 C
ATOM 10 O3' C A1039 38.627 106.040 103.608 1.00 50.21 O
ATOM 11 C2' C A1039 38.713 105.591 105.974 1.00 51.03 C
ATOM 12 O2' C A1039 40.126 105.651 105.818 1.00 54.09 O
ATOM 13 C1' C A1039 38.316 106.474 107.155 1.00 49.01 C
ATOM 14 N1 C A1039 37.217 105.986 108.010 1.00 48.14 N
ATOM 15 C2 C A1039 37.523 105.109 109.057 1.00 48.91 C
ATOM 16 O2 C A1039 38.690 104.680 109.165 1.00 51.66 O
ATOM 17 N3 C A1039 36.549 104.754 109.929 1.00 47.96 N
ATOM 18 C4 C A1039 35.316 105.244 109.786 1.00 47.22 C
ATOM 19 N4 C A1039 34.411 104.946 110.722 1.00 44.92 N
ATOM 20 C5 C A1039 34.962 106.082 108.690 1.00 47.91 C
ATOM 21 C6 C A1039 35.933 106.417 107.827 1.00 47.44 C
ATOM 22 P A A1040 37.797 106.084 102.237 1.00 53.32 P
ATOM 23 OP1 A A1040 37.991 107.454 101.695 1.00 53.27 O
ATOM 24 OP2 A A1040 36.409 105.568 102.466 1.00 52.66 O
ATOM 25 O5' A A1040 38.567 105.046 101.305 1.00 46.43 O
TER
ATOM 1 O3' C B1039 38.627 106.040 103.608 1.00 50.21 O
ATOM 2 P A B1040 37.797 106.084 102.237 1.00 53.32 P
ATOM 3 OP1 A B1040 37.991 107.454 101.695 1.00 53.27 O
ATOM 4 OP2 A B1040 36.409 105.568 102.466 1.00 52.66 O
ATOM 5 O5' A B1040 38.567 105.046 101.305 1.00 46.43 O
ATOM 6 C5' A B1040 38.775 103.701 101.741 1.00 40.38 C
ATOM 7 C4' A B1040 38.742 102.770 100.565 1.00 37.92 C
ATOM 8 O4' A B1040 39.786 103.137 99.636 1.00 36.58 O
ATOM 9 C3' A B1040 39.040 101.323 100.889 1.00 37.38 C
ATOM 10 O3' A B1040 37.860 100.685 101.364 1.00 38.96 O
ATOM 11 C2' A B1040 39.478 100.783 99.537 1.00 36.54 C
ATOM 12 O2' A B1040 38.376 100.544 98.688 1.00 40.56 O
ATOM 13 C1' A B1040 40.246 101.978 98.968 1.00 35.51 C
ATOM 14 N9 A B1040 41.700 101.906 99.097 1.00 32.74 N
ATOM 15 C8 A B1040 42.495 102.454 100.067 1.00 31.51 C
ATOM 16 N7 A B1040 43.775 102.228 99.889 1.00 33.39 N
ATOM 17 C5 A B1040 43.823 101.479 98.722 1.00 32.73 C
ATOM 18 C6 A B1040 44.895 100.921 97.992 1.00 34.31 C
ATOM 19 N6 A B1040 46.179 101.057 98.340 1.00 33.72 N
ATOM 20 N1 A B1040 44.597 100.211 96.877 1.00 33.87 N
ATOM 21 C2 A B1040 43.317 100.085 96.529 1.00 32.59 C
ATOM 22 N3 A B1040 42.228 100.571 97.128 1.00 32.77 N
ATOM 23 C4 A B1040 42.554 101.265 98.229 1.00 31.83 C
ATOM 24 P A B1041 37.692 100.365 102.937 1.00 37.74 P
ATOM 25 OP1 A B1041 36.271 100.686 103.268 1.00 37.93 O
ATOM 26 OP2 A B1041 38.788 101.011 103.718 1.00 34.64 O
ATOM 27 O5' A B1041 37.887 98.790 102.994 1.00 34.59 O
TER
ATOM 2 P C A1039 34.406 109.011 105.244 1.00 40.17 P
ATOM 3 OP1 C A1039 34.202 109.739 103.962 1.00 39.79 O
ATOM 4 OP2 C A1039 33.309 108.189 105.807 1.00 39.63 O
ATOM 5 O5' C A1039 35.680 108.071 105.091 1.00 41.73 O
ATOM 6 C5' C A1039 36.945 108.586 104.642 1.00 44.06 C
ATOM 7 C4' C A1039 38.059 107.736 105.199 1.00 46.20 C
ATOM 8 O4' C A1039 37.963 107.744 106.644 1.00 48.30 O
ATOM 9 C3' C A1039 37.966 106.268 104.834 1.00 48.01 C
ATOM 10 O3' C A1039 38.627 106.040 103.608 1.00 50.21 O
ATOM 11 C2' C A1039 38.713 105.591 105.974 1.00 51.03 C
ATOM 12 O2' C A1039 40.126 105.651 105.818 1.00 54.09 O
ATOM 13 C1' C A1039 38.316 106.474 107.155 1.00 49.01 C
ATOM 14 N1 C A1039 37.217 105.986 108.010 1.00 48.14 N
ATOM 15 C2 C A1039 37.523 105.109 109.057 1.00 48.91 C
ATOM 16 O2 C A1039 38.690 104.680 109.165 1.00 51.66 O
ATOM 17 N3 C A1039 36.549 104.754 109.929 1.00 47.96 N
ATOM 18 C4 C A1039 35.316 105.244 109.786 1.00 47.22 C
ATOM 19 N4 C A1039 34.411 104.946 110.722 1.00 44.92 N
ATOM 20 C5 C A1039 34.962 106.082 108.690 1.00 47.91 C
ATOM 21 C6 C A1039 35.933 106.417 107.827 1.00 47.44 C
ATOM 22 P A A1040 37.797 106.084 102.237 1.00 53.32 P
ATOM 23 OP1 A A1040 37.991 107.454 101.695 1.00 53.27 O
ATOM 24 OP2 A A1040 36.409 105.568 102.466 1.00 52.66 O
ATOM 25 O5' A A1040 38.567 105.046 101.305 1.00 46.43 O
TER
ATOM 1 O3' C B1039 38.627 106.040 103.608 1.00 50.21 O
ATOM 2 P A B1040 37.797 106.084 102.237 1.00 53.32 P
ATOM 3 OP1 A B1040 37.991 107.454 101.695 1.00 53.27 O
ATOM 4 OP2 A B1040 36.409 105.568 102.466 1.00 52.66 O
ATOM 5 O5' A B1040 38.567 105.046 101.305 1.00 46.43 O
ATOM 6 C5' A B1040 38.775 103.701 101.741 1.00 40.38 C
ATOM 7 C4' A B1040 38.742 102.770 100.565 1.00 37.92 C
ATOM 8 O4' A B1040 39.786 103.137 99.636 1.00 36.58 O
ATOM 9 C3' A B1040 39.040 101.323 100.889 1.00 37.38 C
ATOM 10 O3' A B1040 37.860 100.685 101.364 1.00 38.96 O
ATOM 11 C2' A B1040 39.478 100.783 99.537 1.00 36.54 C
ATOM 12 O2' A B1040 38.376 100.544 98.688 1.00 40.56 O
ATOM 13 C1' A B1040 40.246 101.978 98.968 1.00 35.51 C
ATOM 14 N9 A B1040 41.700 101.906 99.097 1.00 32.74 N
ATOM 15 C8 A B1040 42.495 102.454 100.067 1.00 31.51 C
ATOM 16 N7 A B1040 43.775 102.228 99.889 1.00 33.39 N
ATOM 17 C5 A B1040 43.823 101.479 98.722 1.00 32.73 C
ATOM 18 C6 A B1040 44.895 100.921 97.992 1.00 34.31 C
ATOM 19 N6 A B1040 46.179 101.057 98.340 1.00 33.72 N
ATOM 20 N1 A B1040 44.597 100.211 96.877 1.00 33.87 N
ATOM 21 C2 A B1040 43.317 100.085 96.529 1.00 32.59 C
ATOM 22 N3 A B1040 42.228 100.571 97.128 1.00 32.77 N
ATOM 23 C4 A B1040 42.554 101.265 98.229 1.00 31.83 C
ATOM 24 P A B1041 37.692 100.365 102.937 1.00 37.74 P
ATOM 25 OP1 A B1041 36.271 100.686 103.268 1.00 37.93 O
ATOM 26 OP2 A B1041 38.788 101.011 103.718 1.00 34.64 O
ATOM 27 O5' A B1041 37.887 98.790 102.994 1.00 34.59 O
TER
Atoms:
C2: (37.523,105.109,109.057)
OP1: (34.202,109.739,103.962)
OP2: (33.309,108.189,105.807)
C4: (35.316,105.244,109.786)
O5': (35.680,108.071,105.091)
C3': (37.966,106.268,104.834)
C1': (38.316,106.474,107.155)
O4': (37.963,107.744,106.644)
C5': (36.945,108.586,104.642)
P: (34.406,109.011,105.244)
O2: (38.690,104.680,109.165)
C4': (38.059,107.736,105.199)
C2': (38.713,105.591,105.974)
O2': (40.126,105.651,105.818)
N1: (37.217,105.986,108.010)
N3: (36.549,104.754,109.929)
N4: (34.411,104.946,110.722)
C6: (35.933,106.417,107.827)
C5: (34.962,106.082,108.690)
O3': (38.627,106.040,103.608)
OP1: (34.202,109.739,103.962)
OP2: (33.309,108.189,105.807)
C4: (35.316,105.244,109.786)
O5': (35.680,108.071,105.091)
C3': (37.966,106.268,104.834)
C1': (38.316,106.474,107.155)
O4': (37.963,107.744,106.644)
C5': (36.945,108.586,104.642)
P: (34.406,109.011,105.244)
O2: (38.690,104.680,109.165)
C4': (38.059,107.736,105.199)
C2': (38.713,105.591,105.974)
O2': (40.126,105.651,105.818)
N1: (37.217,105.986,108.010)
N3: (36.549,104.754,109.929)
N4: (34.411,104.946,110.722)
C6: (35.933,106.417,107.827)
C5: (34.962,106.082,108.690)
O3': (38.627,106.040,103.608)
OP1: (37.991,107.454,101.695)
OP2: (36.409,105.568,102.466)
C3': (39.040,101.323,100.889)
C1': (40.246,101.978,98.968)
C5': (38.775,103.701,101.741)
O4': (39.786,103.137,99.636)
C8: (42.495,102.454,100.067)
O2': (38.376,100.544,98.688)
C6: (44.895,100.921,97.992)
C5: (43.823,101.479,98.722)
C4: (42.554,101.265,98.229)
P: (37.797,106.084,102.237)
C4': (38.742,102.770,100.565)
C2': (39.478,100.783,99.537)
C2: (43.317,100.085,96.529)
N1: (44.597,100.211,96.877)
N3: (42.228,100.571,97.128)
N6: (46.179,101.057,98.340)
N7: (43.775,102.228,99.889)
N9: (41.700,101.906,99.097)
O5': (38.567,105.046,101.305)
O3': (37.860,100.685,101.364)
OP2: (36.409,105.568,102.466)
C3': (39.040,101.323,100.889)
C1': (40.246,101.978,98.968)
C5': (38.775,103.701,101.741)
O4': (39.786,103.137,99.636)
C8: (42.495,102.454,100.067)
O2': (38.376,100.544,98.688)
C6: (44.895,100.921,97.992)
C5: (43.823,101.479,98.722)
C4: (42.554,101.265,98.229)
P: (37.797,106.084,102.237)
C4': (38.742,102.770,100.565)
C2': (39.478,100.783,99.537)
C2: (43.317,100.085,96.529)
N1: (44.597,100.211,96.877)
N3: (42.228,100.571,97.128)
N6: (46.179,101.057,98.340)
N7: (43.775,102.228,99.889)
N9: (41.700,101.906,99.097)
O5': (38.567,105.046,101.305)
O3': (37.860,100.685,101.364)
Image (generated by PyMOL):