Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQK:01039:01040
Extra
PDB:
ATOM 1 O3' A A1038 34.730 110.125 106.598 1.00 41.06 O
ATOM 2 P C A1039 34.384 108.992 105.517 1.00 41.21 P
ATOM 3 OP1 C A1039 34.199 109.747 104.256 1.00 41.27 O
ATOM 4 OP2 C A1039 33.300 108.115 106.018 1.00 42.80 O
ATOM 5 O5' C A1039 35.697 108.103 105.408 1.00 44.04 O
ATOM 6 C5' C A1039 36.935 108.636 104.904 1.00 46.99 C
ATOM 7 C4' C A1039 38.072 107.750 105.344 1.00 49.91 C
ATOM 8 O4' C A1039 38.059 107.688 106.787 1.00 51.68 O
ATOM 9 C3' C A1039 37.942 106.305 104.896 1.00 52.50 C
ATOM 10 O3' C A1039 38.615 106.140 103.662 1.00 54.73 O
ATOM 11 C2' C A1039 38.680 105.535 105.982 1.00 55.12 C
ATOM 12 O2' C A1039 40.086 105.522 105.785 1.00 59.27 O
ATOM 13 C1' C A1039 38.370 106.378 107.217 1.00 52.15 C
ATOM 14 N1 C A1039 37.287 105.911 108.098 1.00 50.46 N
ATOM 15 C2 C A1039 37.617 105.114 109.204 1.00 50.13 C
ATOM 16 O2 C A1039 38.791 104.725 109.339 1.00 52.39 O
ATOM 17 N3 C A1039 36.654 104.791 110.097 1.00 47.93 N
ATOM 18 C4 C A1039 35.407 105.227 109.919 1.00 47.34 C
ATOM 19 N4 C A1039 34.511 104.956 110.866 1.00 44.31 N
ATOM 20 C5 C A1039 35.028 105.979 108.767 1.00 49.02 C
ATOM 21 C6 C A1039 35.990 106.288 107.886 1.00 48.70 C
ATOM 22 P A A1040 37.781 106.087 102.297 1.00 58.76 P
ATOM 23 OP1 A A1040 37.963 107.417 101.654 1.00 58.92 O
ATOM 24 OP2 A A1040 36.402 105.576 102.555 1.00 57.56 O
ATOM 25 O5' A A1040 38.577 105.010 101.437 1.00 51.16 O
TER
ATOM 1 O3' C B1039 38.615 106.140 103.662 1.00 54.73 O
ATOM 2 P A B1040 37.781 106.087 102.297 1.00 58.76 P
ATOM 3 OP1 A B1040 37.963 107.417 101.654 1.00 58.92 O
ATOM 4 OP2 A B1040 36.402 105.576 102.555 1.00 57.56 O
ATOM 5 O5' A B1040 38.577 105.010 101.437 1.00 51.16 O
ATOM 6 C5' A B1040 38.815 103.699 101.945 1.00 40.89 C
ATOM 7 C4' A B1040 38.797 102.708 100.817 1.00 40.15 C
ATOM 8 O4' A B1040 39.828 103.040 99.856 1.00 36.34 O
ATOM 9 C3' A B1040 39.105 101.281 101.211 1.00 38.71 C
ATOM 10 O3' A B1040 37.912 100.682 101.712 1.00 40.74 O
ATOM 11 C2' A B1040 39.554 100.674 99.885 1.00 38.40 C
ATOM 12 O2' A B1040 38.468 100.331 99.056 1.00 42.52 O
ATOM 13 C1' A B1040 40.282 101.856 99.231 1.00 35.68 C
ATOM 14 N9 A B1040 41.741 101.821 99.310 1.00 32.72 N
ATOM 15 C8 A B1040 42.535 102.431 100.239 1.00 31.02 C
ATOM 16 N7 A B1040 43.814 102.242 100.047 1.00 33.11 N
ATOM 17 C5 A B1040 43.868 101.444 98.914 1.00 31.20 C
ATOM 18 C6 A B1040 44.941 100.880 98.204 1.00 31.01 C
ATOM 19 N6 A B1040 46.221 101.050 98.538 1.00 26.87 N
ATOM 20 N1 A B1040 44.650 100.119 97.125 1.00 31.14 N
ATOM 21 C2 A B1040 43.369 99.949 96.794 1.00 30.63 C
ATOM 22 N3 A B1040 42.279 100.427 97.381 1.00 30.94 N
ATOM 23 C4 A B1040 42.599 101.174 98.450 1.00 31.23 C
ATOM 24 P A B1041 37.781 100.318 103.279 1.00 38.15 P
ATOM 25 OP1 A B1041 36.388 100.628 103.665 1.00 38.80 O
ATOM 26 OP2 A B1041 38.895 100.915 104.055 1.00 38.00 O
ATOM 27 O5' A B1041 37.978 98.740 103.278 1.00 39.19 O
TER
ATOM 2 P C A1039 34.384 108.992 105.517 1.00 41.21 P
ATOM 3 OP1 C A1039 34.199 109.747 104.256 1.00 41.27 O
ATOM 4 OP2 C A1039 33.300 108.115 106.018 1.00 42.80 O
ATOM 5 O5' C A1039 35.697 108.103 105.408 1.00 44.04 O
ATOM 6 C5' C A1039 36.935 108.636 104.904 1.00 46.99 C
ATOM 7 C4' C A1039 38.072 107.750 105.344 1.00 49.91 C
ATOM 8 O4' C A1039 38.059 107.688 106.787 1.00 51.68 O
ATOM 9 C3' C A1039 37.942 106.305 104.896 1.00 52.50 C
ATOM 10 O3' C A1039 38.615 106.140 103.662 1.00 54.73 O
ATOM 11 C2' C A1039 38.680 105.535 105.982 1.00 55.12 C
ATOM 12 O2' C A1039 40.086 105.522 105.785 1.00 59.27 O
ATOM 13 C1' C A1039 38.370 106.378 107.217 1.00 52.15 C
ATOM 14 N1 C A1039 37.287 105.911 108.098 1.00 50.46 N
ATOM 15 C2 C A1039 37.617 105.114 109.204 1.00 50.13 C
ATOM 16 O2 C A1039 38.791 104.725 109.339 1.00 52.39 O
ATOM 17 N3 C A1039 36.654 104.791 110.097 1.00 47.93 N
ATOM 18 C4 C A1039 35.407 105.227 109.919 1.00 47.34 C
ATOM 19 N4 C A1039 34.511 104.956 110.866 1.00 44.31 N
ATOM 20 C5 C A1039 35.028 105.979 108.767 1.00 49.02 C
ATOM 21 C6 C A1039 35.990 106.288 107.886 1.00 48.70 C
ATOM 22 P A A1040 37.781 106.087 102.297 1.00 58.76 P
ATOM 23 OP1 A A1040 37.963 107.417 101.654 1.00 58.92 O
ATOM 24 OP2 A A1040 36.402 105.576 102.555 1.00 57.56 O
ATOM 25 O5' A A1040 38.577 105.010 101.437 1.00 51.16 O
TER
ATOM 1 O3' C B1039 38.615 106.140 103.662 1.00 54.73 O
ATOM 2 P A B1040 37.781 106.087 102.297 1.00 58.76 P
ATOM 3 OP1 A B1040 37.963 107.417 101.654 1.00 58.92 O
ATOM 4 OP2 A B1040 36.402 105.576 102.555 1.00 57.56 O
ATOM 5 O5' A B1040 38.577 105.010 101.437 1.00 51.16 O
ATOM 6 C5' A B1040 38.815 103.699 101.945 1.00 40.89 C
ATOM 7 C4' A B1040 38.797 102.708 100.817 1.00 40.15 C
ATOM 8 O4' A B1040 39.828 103.040 99.856 1.00 36.34 O
ATOM 9 C3' A B1040 39.105 101.281 101.211 1.00 38.71 C
ATOM 10 O3' A B1040 37.912 100.682 101.712 1.00 40.74 O
ATOM 11 C2' A B1040 39.554 100.674 99.885 1.00 38.40 C
ATOM 12 O2' A B1040 38.468 100.331 99.056 1.00 42.52 O
ATOM 13 C1' A B1040 40.282 101.856 99.231 1.00 35.68 C
ATOM 14 N9 A B1040 41.741 101.821 99.310 1.00 32.72 N
ATOM 15 C8 A B1040 42.535 102.431 100.239 1.00 31.02 C
ATOM 16 N7 A B1040 43.814 102.242 100.047 1.00 33.11 N
ATOM 17 C5 A B1040 43.868 101.444 98.914 1.00 31.20 C
ATOM 18 C6 A B1040 44.941 100.880 98.204 1.00 31.01 C
ATOM 19 N6 A B1040 46.221 101.050 98.538 1.00 26.87 N
ATOM 20 N1 A B1040 44.650 100.119 97.125 1.00 31.14 N
ATOM 21 C2 A B1040 43.369 99.949 96.794 1.00 30.63 C
ATOM 22 N3 A B1040 42.279 100.427 97.381 1.00 30.94 N
ATOM 23 C4 A B1040 42.599 101.174 98.450 1.00 31.23 C
ATOM 24 P A B1041 37.781 100.318 103.279 1.00 38.15 P
ATOM 25 OP1 A B1041 36.388 100.628 103.665 1.00 38.80 O
ATOM 26 OP2 A B1041 38.895 100.915 104.055 1.00 38.00 O
ATOM 27 O5' A B1041 37.978 98.740 103.278 1.00 39.19 O
TER
Atoms:
C2: (37.617,105.114,109.204)
OP1: (34.199,109.747,104.256)
OP2: (33.300,108.115,106.018)
C4: (35.407,105.227,109.919)
O5': (35.697,108.103,105.408)
C3': (37.942,106.305,104.896)
C1': (38.370,106.378,107.217)
O4': (38.059,107.688,106.787)
C5': (36.935,108.636,104.904)
P: (34.384,108.992,105.517)
O2: (38.791,104.725,109.339)
C4': (38.072,107.750,105.344)
C2': (38.680,105.535,105.982)
O2': (40.086,105.522,105.785)
N1: (37.287,105.911,108.098)
N3: (36.654,104.791,110.097)
N4: (34.511,104.956,110.866)
C6: (35.990,106.288,107.886)
C5: (35.028,105.979,108.767)
O3': (38.615,106.140,103.662)
OP1: (34.199,109.747,104.256)
OP2: (33.300,108.115,106.018)
C4: (35.407,105.227,109.919)
O5': (35.697,108.103,105.408)
C3': (37.942,106.305,104.896)
C1': (38.370,106.378,107.217)
O4': (38.059,107.688,106.787)
C5': (36.935,108.636,104.904)
P: (34.384,108.992,105.517)
O2: (38.791,104.725,109.339)
C4': (38.072,107.750,105.344)
C2': (38.680,105.535,105.982)
O2': (40.086,105.522,105.785)
N1: (37.287,105.911,108.098)
N3: (36.654,104.791,110.097)
N4: (34.511,104.956,110.866)
C6: (35.990,106.288,107.886)
C5: (35.028,105.979,108.767)
O3': (38.615,106.140,103.662)
OP1: (37.963,107.417,101.654)
OP2: (36.402,105.576,102.555)
C3': (39.105,101.281,101.211)
C1': (40.282,101.856,99.231)
C5': (38.815,103.699,101.945)
O4': (39.828,103.040,99.856)
C8: (42.535,102.431,100.239)
O2': (38.468,100.331,99.056)
C6: (44.941,100.880,98.204)
C5: (43.868,101.444,98.914)
C4: (42.599,101.174,98.450)
P: (37.781,106.087,102.297)
C4': (38.797,102.708,100.817)
C2': (39.554,100.674,99.885)
C2: (43.369,99.949,96.794)
N1: (44.650,100.119,97.125)
N3: (42.279,100.427,97.381)
N6: (46.221,101.050,98.538)
N7: (43.814,102.242,100.047)
N9: (41.741,101.821,99.310)
O5': (38.577,105.010,101.437)
O3': (37.912,100.682,101.712)
OP2: (36.402,105.576,102.555)
C3': (39.105,101.281,101.211)
C1': (40.282,101.856,99.231)
C5': (38.815,103.699,101.945)
O4': (39.828,103.040,99.856)
C8: (42.535,102.431,100.239)
O2': (38.468,100.331,99.056)
C6: (44.941,100.880,98.204)
C5: (43.868,101.444,98.914)
C4: (42.599,101.174,98.450)
P: (37.781,106.087,102.297)
C4': (38.797,102.708,100.817)
C2': (39.554,100.674,99.885)
C2: (43.369,99.949,96.794)
N1: (44.650,100.119,97.125)
N3: (42.279,100.427,97.381)
N6: (46.221,101.050,98.538)
N7: (43.814,102.242,100.047)
N9: (41.741,101.821,99.310)
O5': (38.577,105.010,101.437)
O3': (37.912,100.682,101.712)
Image (generated by PyMOL):