Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQL:01039:01040
Extra
PDB:
ATOM 1 O3' A A1038 34.620 110.067 106.405 1.00 44.66 O
ATOM 2 P C A1039 34.193 108.963 105.319 1.00 45.26 P
ATOM 3 OP1 C A1039 34.041 109.711 104.047 1.00 44.89 O
ATOM 4 OP2 C A1039 33.063 108.148 105.835 1.00 46.78 O
ATOM 5 O5' C A1039 35.437 107.981 105.218 1.00 46.85 O
ATOM 6 C5' C A1039 36.647 108.344 104.542 1.00 49.04 C
ATOM 7 C4' C A1039 37.733 107.370 104.920 1.00 51.68 C
ATOM 8 O4' C A1039 37.982 107.508 106.345 1.00 53.18 O
ATOM 9 C3' C A1039 37.337 105.903 104.793 1.00 55.75 C
ATOM 10 O3' C A1039 37.478 105.276 103.526 1.00 58.04 O
ATOM 11 C2' C A1039 38.323 105.252 105.743 1.00 57.46 C
ATOM 12 O2' C A1039 39.631 105.206 105.195 1.00 60.87 O
ATOM 13 C1' C A1039 38.281 106.237 106.905 1.00 55.21 C
ATOM 14 N1 C A1039 37.222 105.871 107.868 1.00 54.14 N
ATOM 15 C2 C A1039 37.556 105.057 108.963 1.00 53.66 C
ATOM 16 O2 C A1039 38.719 104.634 109.070 1.00 55.03 O
ATOM 17 N3 C A1039 36.605 104.753 109.875 1.00 52.45 N
ATOM 18 C4 C A1039 35.367 105.225 109.732 1.00 51.66 C
ATOM 19 N4 C A1039 34.479 104.945 110.685 1.00 49.18 N
ATOM 20 C5 C A1039 34.989 106.020 108.612 1.00 53.57 C
ATOM 21 C6 C A1039 35.939 106.316 107.712 1.00 53.67 C
ATOM 22 P A A1040 37.976 106.098 102.252 1.00 57.43 P
ATOM 23 OP1 A A1040 39.244 106.762 102.639 1.00 58.08 O
ATOM 24 OP2 A A1040 36.842 106.900 101.725 1.00 55.38 O
ATOM 25 O5' A A1040 38.348 104.942 101.226 1.00 50.22 O
TER
ATOM 1 O3' C B1039 37.478 105.276 103.526 1.00 58.04 O
ATOM 2 P A B1040 37.976 106.098 102.252 1.00 57.43 P
ATOM 3 OP1 A B1040 39.244 106.762 102.639 1.00 58.08 O
ATOM 4 OP2 A B1040 36.842 106.900 101.725 1.00 55.38 O
ATOM 5 O5' A B1040 38.348 104.942 101.226 1.00 50.22 O
ATOM 6 C5' A B1040 38.735 103.655 101.709 1.00 42.59 C
ATOM 7 C4' A B1040 38.685 102.655 100.596 1.00 40.67 C
ATOM 8 O4' A B1040 39.713 102.972 99.630 1.00 36.99 O
ATOM 9 C3' A B1040 38.980 101.230 101.006 1.00 39.34 C
ATOM 10 O3' A B1040 37.776 100.640 101.492 1.00 42.71 O
ATOM 11 C2' A B1040 39.433 100.610 99.689 1.00 39.65 C
ATOM 12 O2' A B1040 38.348 100.284 98.852 1.00 43.05 O
ATOM 13 C1' A B1040 40.181 101.779 99.037 1.00 37.36 C
ATOM 14 N9 A B1040 41.637 101.744 99.152 1.00 34.93 N
ATOM 15 C8 A B1040 42.426 102.320 100.112 1.00 34.45 C
ATOM 16 N7 A B1040 43.707 102.118 99.932 1.00 36.07 N
ATOM 17 C5 A B1040 43.765 101.350 98.778 1.00 34.06 C
ATOM 18 C6 A B1040 44.837 100.779 98.070 1.00 34.19 C
ATOM 19 N6 A B1040 46.117 100.894 98.435 1.00 29.78 N
ATOM 20 N1 A B1040 44.545 100.063 96.962 1.00 34.11 N
ATOM 21 C2 A B1040 43.269 99.928 96.607 1.00 31.35 C
ATOM 22 N3 A B1040 42.181 100.409 97.192 1.00 32.15 N
ATOM 23 C4 A B1040 42.498 101.116 98.286 1.00 33.38 C
ATOM 24 P A B1041 37.626 100.259 103.057 1.00 38.83 P
ATOM 25 OP1 A B1041 36.211 100.530 103.403 1.00 41.45 O
ATOM 26 OP2 A B1041 38.696 100.891 103.856 1.00 41.08 O
ATOM 27 O5' A B1041 37.866 98.689 103.059 1.00 39.72 O
TER
ATOM 2 P C A1039 34.193 108.963 105.319 1.00 45.26 P
ATOM 3 OP1 C A1039 34.041 109.711 104.047 1.00 44.89 O
ATOM 4 OP2 C A1039 33.063 108.148 105.835 1.00 46.78 O
ATOM 5 O5' C A1039 35.437 107.981 105.218 1.00 46.85 O
ATOM 6 C5' C A1039 36.647 108.344 104.542 1.00 49.04 C
ATOM 7 C4' C A1039 37.733 107.370 104.920 1.00 51.68 C
ATOM 8 O4' C A1039 37.982 107.508 106.345 1.00 53.18 O
ATOM 9 C3' C A1039 37.337 105.903 104.793 1.00 55.75 C
ATOM 10 O3' C A1039 37.478 105.276 103.526 1.00 58.04 O
ATOM 11 C2' C A1039 38.323 105.252 105.743 1.00 57.46 C
ATOM 12 O2' C A1039 39.631 105.206 105.195 1.00 60.87 O
ATOM 13 C1' C A1039 38.281 106.237 106.905 1.00 55.21 C
ATOM 14 N1 C A1039 37.222 105.871 107.868 1.00 54.14 N
ATOM 15 C2 C A1039 37.556 105.057 108.963 1.00 53.66 C
ATOM 16 O2 C A1039 38.719 104.634 109.070 1.00 55.03 O
ATOM 17 N3 C A1039 36.605 104.753 109.875 1.00 52.45 N
ATOM 18 C4 C A1039 35.367 105.225 109.732 1.00 51.66 C
ATOM 19 N4 C A1039 34.479 104.945 110.685 1.00 49.18 N
ATOM 20 C5 C A1039 34.989 106.020 108.612 1.00 53.57 C
ATOM 21 C6 C A1039 35.939 106.316 107.712 1.00 53.67 C
ATOM 22 P A A1040 37.976 106.098 102.252 1.00 57.43 P
ATOM 23 OP1 A A1040 39.244 106.762 102.639 1.00 58.08 O
ATOM 24 OP2 A A1040 36.842 106.900 101.725 1.00 55.38 O
ATOM 25 O5' A A1040 38.348 104.942 101.226 1.00 50.22 O
TER
ATOM 1 O3' C B1039 37.478 105.276 103.526 1.00 58.04 O
ATOM 2 P A B1040 37.976 106.098 102.252 1.00 57.43 P
ATOM 3 OP1 A B1040 39.244 106.762 102.639 1.00 58.08 O
ATOM 4 OP2 A B1040 36.842 106.900 101.725 1.00 55.38 O
ATOM 5 O5' A B1040 38.348 104.942 101.226 1.00 50.22 O
ATOM 6 C5' A B1040 38.735 103.655 101.709 1.00 42.59 C
ATOM 7 C4' A B1040 38.685 102.655 100.596 1.00 40.67 C
ATOM 8 O4' A B1040 39.713 102.972 99.630 1.00 36.99 O
ATOM 9 C3' A B1040 38.980 101.230 101.006 1.00 39.34 C
ATOM 10 O3' A B1040 37.776 100.640 101.492 1.00 42.71 O
ATOM 11 C2' A B1040 39.433 100.610 99.689 1.00 39.65 C
ATOM 12 O2' A B1040 38.348 100.284 98.852 1.00 43.05 O
ATOM 13 C1' A B1040 40.181 101.779 99.037 1.00 37.36 C
ATOM 14 N9 A B1040 41.637 101.744 99.152 1.00 34.93 N
ATOM 15 C8 A B1040 42.426 102.320 100.112 1.00 34.45 C
ATOM 16 N7 A B1040 43.707 102.118 99.932 1.00 36.07 N
ATOM 17 C5 A B1040 43.765 101.350 98.778 1.00 34.06 C
ATOM 18 C6 A B1040 44.837 100.779 98.070 1.00 34.19 C
ATOM 19 N6 A B1040 46.117 100.894 98.435 1.00 29.78 N
ATOM 20 N1 A B1040 44.545 100.063 96.962 1.00 34.11 N
ATOM 21 C2 A B1040 43.269 99.928 96.607 1.00 31.35 C
ATOM 22 N3 A B1040 42.181 100.409 97.192 1.00 32.15 N
ATOM 23 C4 A B1040 42.498 101.116 98.286 1.00 33.38 C
ATOM 24 P A B1041 37.626 100.259 103.057 1.00 38.83 P
ATOM 25 OP1 A B1041 36.211 100.530 103.403 1.00 41.45 O
ATOM 26 OP2 A B1041 38.696 100.891 103.856 1.00 41.08 O
ATOM 27 O5' A B1041 37.866 98.689 103.059 1.00 39.72 O
TER
Atoms:
C2: (37.556,105.057,108.963)
OP1: (34.041,109.711,104.047)
OP2: (33.063,108.148,105.835)
C4: (35.367,105.225,109.732)
O5': (35.437,107.981,105.218)
C3': (37.337,105.903,104.793)
C1': (38.281,106.237,106.905)
O4': (37.982,107.508,106.345)
C5': (36.647,108.344,104.542)
P: (34.193,108.963,105.319)
O2: (38.719,104.634,109.070)
C4': (37.733,107.370,104.920)
C2': (38.323,105.252,105.743)
O2': (39.631,105.206,105.195)
N1: (37.222,105.871,107.868)
N3: (36.605,104.753,109.875)
N4: (34.479,104.945,110.685)
C6: (35.939,106.316,107.712)
C5: (34.989,106.020,108.612)
O3': (37.478,105.276,103.526)
OP1: (34.041,109.711,104.047)
OP2: (33.063,108.148,105.835)
C4: (35.367,105.225,109.732)
O5': (35.437,107.981,105.218)
C3': (37.337,105.903,104.793)
C1': (38.281,106.237,106.905)
O4': (37.982,107.508,106.345)
C5': (36.647,108.344,104.542)
P: (34.193,108.963,105.319)
O2: (38.719,104.634,109.070)
C4': (37.733,107.370,104.920)
C2': (38.323,105.252,105.743)
O2': (39.631,105.206,105.195)
N1: (37.222,105.871,107.868)
N3: (36.605,104.753,109.875)
N4: (34.479,104.945,110.685)
C6: (35.939,106.316,107.712)
C5: (34.989,106.020,108.612)
O3': (37.478,105.276,103.526)
OP1: (39.244,106.762,102.639)
OP2: (36.842,106.900,101.725)
C3': (38.980,101.230,101.006)
C1': (40.181,101.779,99.037)
C5': (38.735,103.655,101.709)
O4': (39.713,102.972,99.630)
C8: (42.426,102.320,100.112)
O2': (38.348,100.284,98.852)
C6: (44.837,100.779,98.070)
C5: (43.765,101.350,98.778)
C4: (42.498,101.116,98.286)
P: (37.976,106.098,102.252)
C4': (38.685,102.655,100.596)
C2': (39.433,100.610,99.689)
C2: (43.269,99.928,96.607)
N1: (44.545,100.063,96.962)
N3: (42.181,100.409,97.192)
N6: (46.117,100.894,98.435)
N7: (43.707,102.118,99.932)
N9: (41.637,101.744,99.152)
O5': (38.348,104.942,101.226)
O3': (37.776,100.640,101.492)
OP2: (36.842,106.900,101.725)
C3': (38.980,101.230,101.006)
C1': (40.181,101.779,99.037)
C5': (38.735,103.655,101.709)
O4': (39.713,102.972,99.630)
C8: (42.426,102.320,100.112)
O2': (38.348,100.284,98.852)
C6: (44.837,100.779,98.070)
C5: (43.765,101.350,98.778)
C4: (42.498,101.116,98.286)
P: (37.976,106.098,102.252)
C4': (38.685,102.655,100.596)
C2': (39.433,100.610,99.689)
C2: (43.269,99.928,96.607)
N1: (44.545,100.063,96.962)
N3: (42.181,100.409,97.192)
N6: (46.117,100.894,98.435)
N7: (43.707,102.118,99.932)
N9: (41.637,101.744,99.152)
O5': (38.348,104.942,101.226)
O3': (37.776,100.640,101.492)
Image (generated by PyMOL):