Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQN:01039:01040
Extra
PDB:
ATOM 1 O3' A A1038 34.846 110.160 106.520 1.00 45.99 O
ATOM 2 P C A1039 34.342 109.075 105.447 1.00 47.91 P
ATOM 3 OP1 C A1039 34.038 109.891 104.244 1.00 47.08 O
ATOM 4 OP2 C A1039 33.302 108.192 106.027 1.00 44.79 O
ATOM 5 O5' C A1039 35.602 108.150 105.145 1.00 48.68 O
ATOM 6 C5' C A1039 36.893 108.700 104.837 1.00 51.25 C
ATOM 7 C4' C A1039 37.964 107.788 105.380 1.00 53.92 C
ATOM 8 O4' C A1039 37.799 107.699 106.814 1.00 55.94 O
ATOM 9 C3' C A1039 37.846 106.351 104.906 1.00 56.88 C
ATOM 10 O3' C A1039 38.566 106.187 103.701 1.00 58.85 O
ATOM 11 C2' C A1039 38.509 105.557 106.025 1.00 59.16 C
ATOM 12 O2' C A1039 39.922 105.500 105.911 1.00 62.64 O
ATOM 13 C1' C A1039 38.153 106.401 107.249 1.00 57.38 C
ATOM 14 N1 C A1039 37.112 105.896 108.163 1.00 55.58 N
ATOM 15 C2 C A1039 37.488 105.013 109.180 1.00 54.97 C
ATOM 16 O2 C A1039 38.652 104.579 109.200 1.00 56.59 O
ATOM 17 N3 C A1039 36.578 104.653 110.112 1.00 54.13 N
ATOM 18 C4 C A1039 35.336 105.131 110.049 1.00 53.00 C
ATOM 19 N4 C A1039 34.499 104.820 111.034 1.00 51.04 N
ATOM 20 C5 C A1039 34.905 105.969 108.982 1.00 54.60 C
ATOM 21 C6 C A1039 35.816 106.319 108.065 1.00 55.04 C
ATOM 22 P A A1040 37.791 106.185 102.300 1.00 60.91 P
ATOM 23 OP1 A A1040 38.024 107.524 101.705 1.00 61.06 O
ATOM 24 OP2 A A1040 36.394 105.697 102.485 1.00 60.82 O
ATOM 25 O5' A A1040 38.590 105.099 101.452 1.00 55.08 O
TER
ATOM 1 O3' C B1039 38.566 106.187 103.701 1.00 58.85 O
ATOM 2 P A B1040 37.791 106.185 102.300 1.00 60.91 P
ATOM 3 OP1 A B1040 38.024 107.524 101.705 1.00 61.06 O
ATOM 4 OP2 A B1040 36.394 105.697 102.485 1.00 60.82 O
ATOM 5 O5' A B1040 38.590 105.099 101.452 1.00 55.08 O
ATOM 6 C5' A B1040 38.755 103.764 101.945 1.00 46.42 C
ATOM 7 C4' A B1040 38.750 102.792 100.800 1.00 44.13 C
ATOM 8 O4' A B1040 39.808 103.135 99.877 1.00 42.03 O
ATOM 9 C3' A B1040 39.041 101.352 101.166 1.00 43.61 C
ATOM 10 O3' A B1040 37.843 100.730 101.620 1.00 45.89 O
ATOM 11 C2' A B1040 39.514 100.775 99.836 1.00 43.10 C
ATOM 12 O2' A B1040 38.452 100.471 98.960 1.00 46.62 O
ATOM 13 C1' A B1040 40.266 101.964 99.234 1.00 40.58 C
ATOM 14 N9 A B1040 41.724 101.912 99.327 1.00 37.86 N
ATOM 15 C8 A B1040 42.538 102.466 100.277 1.00 37.67 C
ATOM 16 N7 A B1040 43.814 102.267 100.058 1.00 39.32 N
ATOM 17 C5 A B1040 43.839 101.522 98.890 1.00 37.93 C
ATOM 18 C6 A B1040 44.894 100.974 98.135 1.00 38.98 C
ATOM 19 N6 A B1040 46.186 101.105 98.451 1.00 35.68 N
ATOM 20 N1 A B1040 44.569 100.268 97.027 1.00 39.29 N
ATOM 21 C2 A B1040 43.284 100.129 96.715 1.00 36.33 C
ATOM 22 N3 A B1040 42.211 100.596 97.344 1.00 36.48 N
ATOM 23 C4 A B1040 42.561 101.290 98.435 1.00 36.57 C
ATOM 24 P A B1041 37.666 100.356 103.177 1.00 43.90 P
ATOM 25 OP1 A B1041 36.252 100.660 103.511 1.00 45.60 O
ATOM 26 OP2 A B1041 38.751 100.974 103.979 1.00 43.93 O
ATOM 27 O5' A B1041 37.871 98.782 103.195 1.00 43.33 O
TER
ATOM 2 P C A1039 34.342 109.075 105.447 1.00 47.91 P
ATOM 3 OP1 C A1039 34.038 109.891 104.244 1.00 47.08 O
ATOM 4 OP2 C A1039 33.302 108.192 106.027 1.00 44.79 O
ATOM 5 O5' C A1039 35.602 108.150 105.145 1.00 48.68 O
ATOM 6 C5' C A1039 36.893 108.700 104.837 1.00 51.25 C
ATOM 7 C4' C A1039 37.964 107.788 105.380 1.00 53.92 C
ATOM 8 O4' C A1039 37.799 107.699 106.814 1.00 55.94 O
ATOM 9 C3' C A1039 37.846 106.351 104.906 1.00 56.88 C
ATOM 10 O3' C A1039 38.566 106.187 103.701 1.00 58.85 O
ATOM 11 C2' C A1039 38.509 105.557 106.025 1.00 59.16 C
ATOM 12 O2' C A1039 39.922 105.500 105.911 1.00 62.64 O
ATOM 13 C1' C A1039 38.153 106.401 107.249 1.00 57.38 C
ATOM 14 N1 C A1039 37.112 105.896 108.163 1.00 55.58 N
ATOM 15 C2 C A1039 37.488 105.013 109.180 1.00 54.97 C
ATOM 16 O2 C A1039 38.652 104.579 109.200 1.00 56.59 O
ATOM 17 N3 C A1039 36.578 104.653 110.112 1.00 54.13 N
ATOM 18 C4 C A1039 35.336 105.131 110.049 1.00 53.00 C
ATOM 19 N4 C A1039 34.499 104.820 111.034 1.00 51.04 N
ATOM 20 C5 C A1039 34.905 105.969 108.982 1.00 54.60 C
ATOM 21 C6 C A1039 35.816 106.319 108.065 1.00 55.04 C
ATOM 22 P A A1040 37.791 106.185 102.300 1.00 60.91 P
ATOM 23 OP1 A A1040 38.024 107.524 101.705 1.00 61.06 O
ATOM 24 OP2 A A1040 36.394 105.697 102.485 1.00 60.82 O
ATOM 25 O5' A A1040 38.590 105.099 101.452 1.00 55.08 O
TER
ATOM 1 O3' C B1039 38.566 106.187 103.701 1.00 58.85 O
ATOM 2 P A B1040 37.791 106.185 102.300 1.00 60.91 P
ATOM 3 OP1 A B1040 38.024 107.524 101.705 1.00 61.06 O
ATOM 4 OP2 A B1040 36.394 105.697 102.485 1.00 60.82 O
ATOM 5 O5' A B1040 38.590 105.099 101.452 1.00 55.08 O
ATOM 6 C5' A B1040 38.755 103.764 101.945 1.00 46.42 C
ATOM 7 C4' A B1040 38.750 102.792 100.800 1.00 44.13 C
ATOM 8 O4' A B1040 39.808 103.135 99.877 1.00 42.03 O
ATOM 9 C3' A B1040 39.041 101.352 101.166 1.00 43.61 C
ATOM 10 O3' A B1040 37.843 100.730 101.620 1.00 45.89 O
ATOM 11 C2' A B1040 39.514 100.775 99.836 1.00 43.10 C
ATOM 12 O2' A B1040 38.452 100.471 98.960 1.00 46.62 O
ATOM 13 C1' A B1040 40.266 101.964 99.234 1.00 40.58 C
ATOM 14 N9 A B1040 41.724 101.912 99.327 1.00 37.86 N
ATOM 15 C8 A B1040 42.538 102.466 100.277 1.00 37.67 C
ATOM 16 N7 A B1040 43.814 102.267 100.058 1.00 39.32 N
ATOM 17 C5 A B1040 43.839 101.522 98.890 1.00 37.93 C
ATOM 18 C6 A B1040 44.894 100.974 98.135 1.00 38.98 C
ATOM 19 N6 A B1040 46.186 101.105 98.451 1.00 35.68 N
ATOM 20 N1 A B1040 44.569 100.268 97.027 1.00 39.29 N
ATOM 21 C2 A B1040 43.284 100.129 96.715 1.00 36.33 C
ATOM 22 N3 A B1040 42.211 100.596 97.344 1.00 36.48 N
ATOM 23 C4 A B1040 42.561 101.290 98.435 1.00 36.57 C
ATOM 24 P A B1041 37.666 100.356 103.177 1.00 43.90 P
ATOM 25 OP1 A B1041 36.252 100.660 103.511 1.00 45.60 O
ATOM 26 OP2 A B1041 38.751 100.974 103.979 1.00 43.93 O
ATOM 27 O5' A B1041 37.871 98.782 103.195 1.00 43.33 O
TER
Atoms:
C2: (37.488,105.013,109.180)
OP1: (34.038,109.891,104.244)
OP2: (33.302,108.192,106.027)
C4: (35.336,105.131,110.049)
O5': (35.602,108.150,105.145)
C3': (37.846,106.351,104.906)
C1': (38.153,106.401,107.249)
O4': (37.799,107.699,106.814)
C5': (36.893,108.700,104.837)
P: (34.342,109.075,105.447)
O2: (38.652,104.579,109.200)
C4': (37.964,107.788,105.380)
C2': (38.509,105.557,106.025)
O2': (39.922,105.500,105.911)
N1: (37.112,105.896,108.163)
N3: (36.578,104.653,110.112)
N4: (34.499,104.820,111.034)
C6: (35.816,106.319,108.065)
C5: (34.905,105.969,108.982)
O3': (38.566,106.187,103.701)
OP1: (34.038,109.891,104.244)
OP2: (33.302,108.192,106.027)
C4: (35.336,105.131,110.049)
O5': (35.602,108.150,105.145)
C3': (37.846,106.351,104.906)
C1': (38.153,106.401,107.249)
O4': (37.799,107.699,106.814)
C5': (36.893,108.700,104.837)
P: (34.342,109.075,105.447)
O2: (38.652,104.579,109.200)
C4': (37.964,107.788,105.380)
C2': (38.509,105.557,106.025)
O2': (39.922,105.500,105.911)
N1: (37.112,105.896,108.163)
N3: (36.578,104.653,110.112)
N4: (34.499,104.820,111.034)
C6: (35.816,106.319,108.065)
C5: (34.905,105.969,108.982)
O3': (38.566,106.187,103.701)
OP1: (38.024,107.524,101.705)
OP2: (36.394,105.697,102.485)
C3': (39.041,101.352,101.166)
C1': (40.266,101.964,99.234)
C5': (38.755,103.764,101.945)
O4': (39.808,103.135,99.877)
C8: (42.538,102.466,100.277)
O2': (38.452,100.471,98.960)
C6: (44.894,100.974,98.135)
C5: (43.839,101.522,98.890)
C4: (42.561,101.290,98.435)
P: (37.791,106.185,102.300)
C4': (38.750,102.792,100.800)
C2': (39.514,100.775,99.836)
C2: (43.284,100.129,96.715)
N1: (44.569,100.268,97.027)
N3: (42.211,100.596,97.344)
N6: (46.186,101.105,98.451)
N7: (43.814,102.267,100.058)
N9: (41.724,101.912,99.327)
O5': (38.590,105.099,101.452)
O3': (37.843,100.730,101.620)
OP2: (36.394,105.697,102.485)
C3': (39.041,101.352,101.166)
C1': (40.266,101.964,99.234)
C5': (38.755,103.764,101.945)
O4': (39.808,103.135,99.877)
C8: (42.538,102.466,100.277)
O2': (38.452,100.471,98.960)
C6: (44.894,100.974,98.135)
C5: (43.839,101.522,98.890)
C4: (42.561,101.290,98.435)
P: (37.791,106.185,102.300)
C4': (38.750,102.792,100.800)
C2': (39.514,100.775,99.836)
C2: (43.284,100.129,96.715)
N1: (44.569,100.268,97.027)
N3: (42.211,100.596,97.344)
N6: (46.186,101.105,98.451)
N7: (43.814,102.267,100.058)
N9: (41.724,101.912,99.327)
O5': (38.590,105.099,101.452)
O3': (37.843,100.730,101.620)
Image (generated by PyMOL):