Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQO:01039:01040
Extra
PDB:
ATOM 1 O3' A A1038 34.678 110.637 106.604 1.00 44.44 O
ATOM 2 P C A1039 34.322 109.511 105.512 1.00 44.87 P
ATOM 3 OP1 C A1039 34.205 110.246 104.231 1.00 44.93 O
ATOM 4 OP2 C A1039 33.207 108.653 105.970 1.00 46.29 O
ATOM 5 O5' C A1039 35.604 108.583 105.471 1.00 47.20 O
ATOM 6 C5' C A1039 36.783 108.950 104.746 1.00 50.07 C
ATOM 7 C4' C A1039 37.860 107.949 105.045 1.00 52.21 C
ATOM 8 O4' C A1039 38.158 108.028 106.466 1.00 52.81 O
ATOM 9 C3' C A1039 37.408 106.505 104.871 1.00 56.12 C
ATOM 10 O3' C A1039 37.470 105.952 103.556 1.00 59.33 O
ATOM 11 C2' C A1039 38.381 105.778 105.779 1.00 57.86 C
ATOM 12 O2' C A1039 39.672 105.688 105.200 1.00 61.08 O
ATOM 13 C1' C A1039 38.417 106.727 106.975 1.00 54.99 C
ATOM 14 N1 C A1039 37.382 106.386 107.978 1.00 52.51 N
ATOM 15 C2 C A1039 37.754 105.627 109.104 1.00 52.85 C
ATOM 16 O2 C A1039 38.938 105.260 109.227 1.00 55.04 O
ATOM 17 N3 C A1039 36.816 105.319 110.031 1.00 49.56 N
ATOM 18 C4 C A1039 35.562 105.742 109.877 1.00 49.17 C
ATOM 19 N4 C A1039 34.682 105.442 110.830 1.00 47.89 N
ATOM 20 C5 C A1039 35.155 106.502 108.741 1.00 49.67 C
ATOM 21 C6 C A1039 36.088 106.796 107.826 1.00 50.37 C
ATOM 22 P A A1040 38.356 106.646 102.412 1.00 61.00 P
ATOM 23 OP1 A A1040 39.653 107.064 103.007 1.00 59.29 O
ATOM 24 OP2 A A1040 37.510 107.639 101.709 1.00 59.22 O
ATOM 25 O5' A A1040 38.669 105.440 101.420 1.00 54.06 O
TER
ATOM 1 O3' C B1039 37.470 105.952 103.556 1.00 59.33 O
ATOM 2 P A B1040 38.356 106.646 102.412 1.00 61.00 P
ATOM 3 OP1 A B1040 39.653 107.064 103.007 1.00 59.29 O
ATOM 4 OP2 A B1040 37.510 107.639 101.709 1.00 59.22 O
ATOM 5 O5' A B1040 38.669 105.440 101.420 1.00 54.06 O
ATOM 6 C5' A B1040 38.950 104.131 101.929 1.00 44.48 C
ATOM 7 C4' A B1040 38.910 103.131 100.807 1.00 42.41 C
ATOM 8 O4' A B1040 39.941 103.457 99.841 1.00 37.42 O
ATOM 9 C3' A B1040 39.202 101.695 101.198 1.00 39.77 C
ATOM 10 O3' A B1040 38.005 101.089 101.683 1.00 42.25 O
ATOM 11 C2' A B1040 39.649 101.094 99.868 1.00 40.56 C
ATOM 12 O2' A B1040 38.568 100.798 99.010 1.00 43.86 O
ATOM 13 C1' A B1040 40.406 102.270 99.237 1.00 38.17 C
ATOM 14 N9 A B1040 41.863 102.231 99.355 1.00 35.55 N
ATOM 15 C8 A B1040 42.646 102.820 100.310 1.00 33.71 C
ATOM 16 N7 A B1040 43.928 102.640 100.125 1.00 35.30 N
ATOM 17 C5 A B1040 43.993 101.867 98.974 1.00 34.81 C
ATOM 18 C6 A B1040 45.074 101.327 98.260 1.00 34.44 C
ATOM 19 N6 A B1040 46.354 101.513 98.601 1.00 32.12 N
ATOM 20 N1 A B1040 44.793 100.579 97.166 1.00 36.71 N
ATOM 21 C2 A B1040 43.515 100.409 96.822 1.00 34.48 C
ATOM 22 N3 A B1040 42.417 100.877 97.410 1.00 34.34 N
ATOM 23 C4 A B1040 42.730 101.603 98.495 1.00 32.63 C
ATOM 24 P A B1041 37.850 100.723 103.252 1.00 39.38 P
ATOM 25 OP1 A B1041 36.452 101.053 103.607 1.00 38.97 O
ATOM 26 OP2 A B1041 38.957 101.297 104.052 1.00 38.72 O
ATOM 27 O5' A B1041 38.023 99.142 103.259 1.00 39.85 O
TER
ATOM 2 P C A1039 34.322 109.511 105.512 1.00 44.87 P
ATOM 3 OP1 C A1039 34.205 110.246 104.231 1.00 44.93 O
ATOM 4 OP2 C A1039 33.207 108.653 105.970 1.00 46.29 O
ATOM 5 O5' C A1039 35.604 108.583 105.471 1.00 47.20 O
ATOM 6 C5' C A1039 36.783 108.950 104.746 1.00 50.07 C
ATOM 7 C4' C A1039 37.860 107.949 105.045 1.00 52.21 C
ATOM 8 O4' C A1039 38.158 108.028 106.466 1.00 52.81 O
ATOM 9 C3' C A1039 37.408 106.505 104.871 1.00 56.12 C
ATOM 10 O3' C A1039 37.470 105.952 103.556 1.00 59.33 O
ATOM 11 C2' C A1039 38.381 105.778 105.779 1.00 57.86 C
ATOM 12 O2' C A1039 39.672 105.688 105.200 1.00 61.08 O
ATOM 13 C1' C A1039 38.417 106.727 106.975 1.00 54.99 C
ATOM 14 N1 C A1039 37.382 106.386 107.978 1.00 52.51 N
ATOM 15 C2 C A1039 37.754 105.627 109.104 1.00 52.85 C
ATOM 16 O2 C A1039 38.938 105.260 109.227 1.00 55.04 O
ATOM 17 N3 C A1039 36.816 105.319 110.031 1.00 49.56 N
ATOM 18 C4 C A1039 35.562 105.742 109.877 1.00 49.17 C
ATOM 19 N4 C A1039 34.682 105.442 110.830 1.00 47.89 N
ATOM 20 C5 C A1039 35.155 106.502 108.741 1.00 49.67 C
ATOM 21 C6 C A1039 36.088 106.796 107.826 1.00 50.37 C
ATOM 22 P A A1040 38.356 106.646 102.412 1.00 61.00 P
ATOM 23 OP1 A A1040 39.653 107.064 103.007 1.00 59.29 O
ATOM 24 OP2 A A1040 37.510 107.639 101.709 1.00 59.22 O
ATOM 25 O5' A A1040 38.669 105.440 101.420 1.00 54.06 O
TER
ATOM 1 O3' C B1039 37.470 105.952 103.556 1.00 59.33 O
ATOM 2 P A B1040 38.356 106.646 102.412 1.00 61.00 P
ATOM 3 OP1 A B1040 39.653 107.064 103.007 1.00 59.29 O
ATOM 4 OP2 A B1040 37.510 107.639 101.709 1.00 59.22 O
ATOM 5 O5' A B1040 38.669 105.440 101.420 1.00 54.06 O
ATOM 6 C5' A B1040 38.950 104.131 101.929 1.00 44.48 C
ATOM 7 C4' A B1040 38.910 103.131 100.807 1.00 42.41 C
ATOM 8 O4' A B1040 39.941 103.457 99.841 1.00 37.42 O
ATOM 9 C3' A B1040 39.202 101.695 101.198 1.00 39.77 C
ATOM 10 O3' A B1040 38.005 101.089 101.683 1.00 42.25 O
ATOM 11 C2' A B1040 39.649 101.094 99.868 1.00 40.56 C
ATOM 12 O2' A B1040 38.568 100.798 99.010 1.00 43.86 O
ATOM 13 C1' A B1040 40.406 102.270 99.237 1.00 38.17 C
ATOM 14 N9 A B1040 41.863 102.231 99.355 1.00 35.55 N
ATOM 15 C8 A B1040 42.646 102.820 100.310 1.00 33.71 C
ATOM 16 N7 A B1040 43.928 102.640 100.125 1.00 35.30 N
ATOM 17 C5 A B1040 43.993 101.867 98.974 1.00 34.81 C
ATOM 18 C6 A B1040 45.074 101.327 98.260 1.00 34.44 C
ATOM 19 N6 A B1040 46.354 101.513 98.601 1.00 32.12 N
ATOM 20 N1 A B1040 44.793 100.579 97.166 1.00 36.71 N
ATOM 21 C2 A B1040 43.515 100.409 96.822 1.00 34.48 C
ATOM 22 N3 A B1040 42.417 100.877 97.410 1.00 34.34 N
ATOM 23 C4 A B1040 42.730 101.603 98.495 1.00 32.63 C
ATOM 24 P A B1041 37.850 100.723 103.252 1.00 39.38 P
ATOM 25 OP1 A B1041 36.452 101.053 103.607 1.00 38.97 O
ATOM 26 OP2 A B1041 38.957 101.297 104.052 1.00 38.72 O
ATOM 27 O5' A B1041 38.023 99.142 103.259 1.00 39.85 O
TER
Atoms:
C2: (37.754,105.627,109.104)
OP1: (34.205,110.246,104.231)
OP2: (33.207,108.653,105.970)
C4: (35.562,105.742,109.877)
O5': (35.604,108.583,105.471)
C3': (37.408,106.505,104.871)
C1': (38.417,106.727,106.975)
O4': (38.158,108.028,106.466)
C5': (36.783,108.950,104.746)
P: (34.322,109.511,105.512)
O2: (38.938,105.260,109.227)
C4': (37.860,107.949,105.045)
C2': (38.381,105.778,105.779)
O2': (39.672,105.688,105.200)
N1: (37.382,106.386,107.978)
N3: (36.816,105.319,110.031)
N4: (34.682,105.442,110.830)
C6: (36.088,106.796,107.826)
C5: (35.155,106.502,108.741)
O3': (37.470,105.952,103.556)
OP1: (34.205,110.246,104.231)
OP2: (33.207,108.653,105.970)
C4: (35.562,105.742,109.877)
O5': (35.604,108.583,105.471)
C3': (37.408,106.505,104.871)
C1': (38.417,106.727,106.975)
O4': (38.158,108.028,106.466)
C5': (36.783,108.950,104.746)
P: (34.322,109.511,105.512)
O2: (38.938,105.260,109.227)
C4': (37.860,107.949,105.045)
C2': (38.381,105.778,105.779)
O2': (39.672,105.688,105.200)
N1: (37.382,106.386,107.978)
N3: (36.816,105.319,110.031)
N4: (34.682,105.442,110.830)
C6: (36.088,106.796,107.826)
C5: (35.155,106.502,108.741)
O3': (37.470,105.952,103.556)
OP1: (39.653,107.064,103.007)
OP2: (37.510,107.639,101.709)
C3': (39.202,101.695,101.198)
C1': (40.406,102.270,99.237)
C5': (38.950,104.131,101.929)
O4': (39.941,103.457,99.841)
C8: (42.646,102.820,100.310)
O2': (38.568,100.798,99.010)
C6: (45.074,101.327,98.260)
C5: (43.993,101.867,98.974)
C4: (42.730,101.603,98.495)
P: (38.356,106.646,102.412)
C4': (38.910,103.131,100.807)
C2': (39.649,101.094,99.868)
C2: (43.515,100.409,96.822)
N1: (44.793,100.579,97.166)
N3: (42.417,100.877,97.410)
N6: (46.354,101.513,98.601)
N7: (43.928,102.640,100.125)
N9: (41.863,102.231,99.355)
O5': (38.669,105.440,101.420)
O3': (38.005,101.089,101.683)
OP2: (37.510,107.639,101.709)
C3': (39.202,101.695,101.198)
C1': (40.406,102.270,99.237)
C5': (38.950,104.131,101.929)
O4': (39.941,103.457,99.841)
C8: (42.646,102.820,100.310)
O2': (38.568,100.798,99.010)
C6: (45.074,101.327,98.260)
C5: (43.993,101.867,98.974)
C4: (42.730,101.603,98.495)
P: (38.356,106.646,102.412)
C4': (38.910,103.131,100.807)
C2': (39.649,101.094,99.868)
C2: (43.515,100.409,96.822)
N1: (44.793,100.579,97.166)
N3: (42.417,100.877,97.410)
N6: (46.354,101.513,98.601)
N7: (43.928,102.640,100.125)
N9: (41.863,102.231,99.355)
O5': (38.669,105.440,101.420)
O3': (38.005,101.089,101.683)
Image (generated by PyMOL):