Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQP:01039:01040
Extra
PDB:
ATOM 1 O3' A A1038 34.725 109.953 106.490 1.00 42.76 O
ATOM 2 P C A1039 34.284 108.850 105.409 1.00 43.66 P
ATOM 3 OP1 C A1039 34.100 109.606 104.151 1.00 42.92 O
ATOM 4 OP2 C A1039 33.162 108.041 105.950 1.00 44.97 O
ATOM 5 O5' C A1039 35.532 107.868 105.279 1.00 46.64 O
ATOM 6 C5' C A1039 36.780 108.275 104.675 1.00 48.21 C
ATOM 7 C4' C A1039 37.895 107.374 105.164 1.00 50.61 C
ATOM 8 O4' C A1039 37.929 107.479 106.609 1.00 52.39 O
ATOM 9 C3' C A1039 37.696 105.882 104.915 1.00 53.84 C
ATOM 10 O3' C A1039 38.313 105.405 103.734 1.00 56.79 O
ATOM 11 C2' C A1039 38.515 105.254 106.030 1.00 56.21 C
ATOM 12 O2' C A1039 39.905 105.236 105.741 1.00 58.88 O
ATOM 13 C1' C A1039 38.259 106.223 107.175 1.00 53.17 C
ATOM 14 N1 C A1039 37.174 105.793 108.073 1.00 51.86 N
ATOM 15 C2 C A1039 37.493 104.954 109.150 1.00 51.25 C
ATOM 16 O2 C A1039 38.657 104.532 109.262 1.00 52.99 O
ATOM 17 N3 C A1039 36.531 104.628 110.040 1.00 48.39 N
ATOM 18 C4 C A1039 35.294 105.097 109.888 1.00 47.54 C
ATOM 19 N4 C A1039 34.402 104.808 110.828 1.00 45.75 N
ATOM 20 C5 C A1039 34.924 105.902 108.770 1.00 49.67 C
ATOM 21 C6 C A1039 35.888 106.220 107.892 1.00 50.81 C
ATOM 22 P A A1040 38.009 106.079 102.317 1.00 58.13 P
ATOM 23 OP1 A A1040 39.045 107.133 102.189 1.00 60.64 O
ATOM 24 OP2 A A1040 36.571 106.434 102.176 1.00 56.78 O
ATOM 25 O5' A A1040 38.371 104.911 101.296 1.00 51.53 O
TER
ATOM 1 O3' C B1039 38.313 105.405 103.734 1.00 56.79 O
ATOM 2 P A B1040 38.009 106.079 102.317 1.00 58.13 P
ATOM 3 OP1 A B1040 39.045 107.133 102.189 1.00 60.64 O
ATOM 4 OP2 A B1040 36.571 106.434 102.176 1.00 56.78 O
ATOM 5 O5' A B1040 38.371 104.911 101.296 1.00 51.53 O
ATOM 6 C5' A B1040 38.729 103.611 101.782 1.00 41.03 C
ATOM 7 C4' A B1040 38.719 102.617 100.661 1.00 38.82 C
ATOM 8 O4' A B1040 39.775 102.937 99.727 1.00 34.14 O
ATOM 9 C3' A B1040 39.018 101.191 101.072 1.00 37.76 C
ATOM 10 O3' A B1040 37.825 100.587 101.569 1.00 39.65 O
ATOM 11 C2' A B1040 39.482 100.577 99.755 1.00 38.01 C
ATOM 12 O2' A B1040 38.406 100.270 98.894 1.00 41.04 O
ATOM 13 C1' A B1040 40.239 101.750 99.122 1.00 34.21 C
ATOM 14 N9 A B1040 41.695 101.707 99.233 1.00 32.13 N
ATOM 15 C8 A B1040 42.494 102.308 100.172 1.00 31.64 C
ATOM 16 N7 A B1040 43.773 102.102 99.985 1.00 32.61 N
ATOM 17 C5 A B1040 43.822 101.303 98.852 1.00 31.74 C
ATOM 18 C6 A B1040 44.892 100.720 98.147 1.00 32.42 C
ATOM 19 N6 A B1040 46.177 100.864 98.492 1.00 31.52 N
ATOM 20 N1 A B1040 44.593 99.969 97.064 1.00 32.36 N
ATOM 21 C2 A B1040 43.309 99.820 96.723 1.00 30.86 C
ATOM 22 N3 A B1040 42.221 100.313 97.307 1.00 29.50 N
ATOM 23 C4 A B1040 42.549 101.050 98.379 1.00 31.08 C
ATOM 24 P A B1041 37.695 100.207 103.136 1.00 37.61 P
ATOM 25 OP1 A B1041 36.287 100.505 103.510 1.00 39.50 O
ATOM 26 OP2 A B1041 38.796 100.816 103.919 1.00 39.63 O
ATOM 27 O5' A B1041 37.915 98.632 103.141 1.00 38.31 O
TER
ATOM 2 P C A1039 34.284 108.850 105.409 1.00 43.66 P
ATOM 3 OP1 C A1039 34.100 109.606 104.151 1.00 42.92 O
ATOM 4 OP2 C A1039 33.162 108.041 105.950 1.00 44.97 O
ATOM 5 O5' C A1039 35.532 107.868 105.279 1.00 46.64 O
ATOM 6 C5' C A1039 36.780 108.275 104.675 1.00 48.21 C
ATOM 7 C4' C A1039 37.895 107.374 105.164 1.00 50.61 C
ATOM 8 O4' C A1039 37.929 107.479 106.609 1.00 52.39 O
ATOM 9 C3' C A1039 37.696 105.882 104.915 1.00 53.84 C
ATOM 10 O3' C A1039 38.313 105.405 103.734 1.00 56.79 O
ATOM 11 C2' C A1039 38.515 105.254 106.030 1.00 56.21 C
ATOM 12 O2' C A1039 39.905 105.236 105.741 1.00 58.88 O
ATOM 13 C1' C A1039 38.259 106.223 107.175 1.00 53.17 C
ATOM 14 N1 C A1039 37.174 105.793 108.073 1.00 51.86 N
ATOM 15 C2 C A1039 37.493 104.954 109.150 1.00 51.25 C
ATOM 16 O2 C A1039 38.657 104.532 109.262 1.00 52.99 O
ATOM 17 N3 C A1039 36.531 104.628 110.040 1.00 48.39 N
ATOM 18 C4 C A1039 35.294 105.097 109.888 1.00 47.54 C
ATOM 19 N4 C A1039 34.402 104.808 110.828 1.00 45.75 N
ATOM 20 C5 C A1039 34.924 105.902 108.770 1.00 49.67 C
ATOM 21 C6 C A1039 35.888 106.220 107.892 1.00 50.81 C
ATOM 22 P A A1040 38.009 106.079 102.317 1.00 58.13 P
ATOM 23 OP1 A A1040 39.045 107.133 102.189 1.00 60.64 O
ATOM 24 OP2 A A1040 36.571 106.434 102.176 1.00 56.78 O
ATOM 25 O5' A A1040 38.371 104.911 101.296 1.00 51.53 O
TER
ATOM 1 O3' C B1039 38.313 105.405 103.734 1.00 56.79 O
ATOM 2 P A B1040 38.009 106.079 102.317 1.00 58.13 P
ATOM 3 OP1 A B1040 39.045 107.133 102.189 1.00 60.64 O
ATOM 4 OP2 A B1040 36.571 106.434 102.176 1.00 56.78 O
ATOM 5 O5' A B1040 38.371 104.911 101.296 1.00 51.53 O
ATOM 6 C5' A B1040 38.729 103.611 101.782 1.00 41.03 C
ATOM 7 C4' A B1040 38.719 102.617 100.661 1.00 38.82 C
ATOM 8 O4' A B1040 39.775 102.937 99.727 1.00 34.14 O
ATOM 9 C3' A B1040 39.018 101.191 101.072 1.00 37.76 C
ATOM 10 O3' A B1040 37.825 100.587 101.569 1.00 39.65 O
ATOM 11 C2' A B1040 39.482 100.577 99.755 1.00 38.01 C
ATOM 12 O2' A B1040 38.406 100.270 98.894 1.00 41.04 O
ATOM 13 C1' A B1040 40.239 101.750 99.122 1.00 34.21 C
ATOM 14 N9 A B1040 41.695 101.707 99.233 1.00 32.13 N
ATOM 15 C8 A B1040 42.494 102.308 100.172 1.00 31.64 C
ATOM 16 N7 A B1040 43.773 102.102 99.985 1.00 32.61 N
ATOM 17 C5 A B1040 43.822 101.303 98.852 1.00 31.74 C
ATOM 18 C6 A B1040 44.892 100.720 98.147 1.00 32.42 C
ATOM 19 N6 A B1040 46.177 100.864 98.492 1.00 31.52 N
ATOM 20 N1 A B1040 44.593 99.969 97.064 1.00 32.36 N
ATOM 21 C2 A B1040 43.309 99.820 96.723 1.00 30.86 C
ATOM 22 N3 A B1040 42.221 100.313 97.307 1.00 29.50 N
ATOM 23 C4 A B1040 42.549 101.050 98.379 1.00 31.08 C
ATOM 24 P A B1041 37.695 100.207 103.136 1.00 37.61 P
ATOM 25 OP1 A B1041 36.287 100.505 103.510 1.00 39.50 O
ATOM 26 OP2 A B1041 38.796 100.816 103.919 1.00 39.63 O
ATOM 27 O5' A B1041 37.915 98.632 103.141 1.00 38.31 O
TER
Atoms:
C2: (37.493,104.954,109.150)
OP1: (34.100,109.606,104.151)
OP2: (33.162,108.041,105.950)
C4: (35.294,105.097,109.888)
O5': (35.532,107.868,105.279)
C3': (37.696,105.882,104.915)
C1': (38.259,106.223,107.175)
O4': (37.929,107.479,106.609)
C5': (36.780,108.275,104.675)
P: (34.284,108.850,105.409)
O2: (38.657,104.532,109.262)
C4': (37.895,107.374,105.164)
C2': (38.515,105.254,106.030)
O2': (39.905,105.236,105.741)
N1: (37.174,105.793,108.073)
N3: (36.531,104.628,110.040)
N4: (34.402,104.808,110.828)
C6: (35.888,106.220,107.892)
C5: (34.924,105.902,108.770)
O3': (38.313,105.405,103.734)
OP1: (34.100,109.606,104.151)
OP2: (33.162,108.041,105.950)
C4: (35.294,105.097,109.888)
O5': (35.532,107.868,105.279)
C3': (37.696,105.882,104.915)
C1': (38.259,106.223,107.175)
O4': (37.929,107.479,106.609)
C5': (36.780,108.275,104.675)
P: (34.284,108.850,105.409)
O2: (38.657,104.532,109.262)
C4': (37.895,107.374,105.164)
C2': (38.515,105.254,106.030)
O2': (39.905,105.236,105.741)
N1: (37.174,105.793,108.073)
N3: (36.531,104.628,110.040)
N4: (34.402,104.808,110.828)
C6: (35.888,106.220,107.892)
C5: (34.924,105.902,108.770)
O3': (38.313,105.405,103.734)
OP1: (39.045,107.133,102.189)
OP2: (36.571,106.434,102.176)
C3': (39.018,101.191,101.072)
C1': (40.239,101.750,99.122)
C5': (38.729,103.611,101.782)
O4': (39.775,102.937,99.727)
C8: (42.494,102.308,100.172)
O2': (38.406,100.270,98.894)
C6: (44.892,100.720,98.147)
C5: (43.822,101.303,98.852)
C4: (42.549,101.050,98.379)
P: (38.009,106.079,102.317)
C4': (38.719,102.617,100.661)
C2': (39.482,100.577,99.755)
C2: (43.309,99.820,96.723)
N1: (44.593,99.969,97.064)
N3: (42.221,100.313,97.307)
N6: (46.177,100.864,98.492)
N7: (43.773,102.102,99.985)
N9: (41.695,101.707,99.233)
O5': (38.371,104.911,101.296)
O3': (37.825,100.587,101.569)
OP2: (36.571,106.434,102.176)
C3': (39.018,101.191,101.072)
C1': (40.239,101.750,99.122)
C5': (38.729,103.611,101.782)
O4': (39.775,102.937,99.727)
C8: (42.494,102.308,100.172)
O2': (38.406,100.270,98.894)
C6: (44.892,100.720,98.147)
C5: (43.822,101.303,98.852)
C4: (42.549,101.050,98.379)
P: (38.009,106.079,102.317)
C4': (38.719,102.617,100.661)
C2': (39.482,100.577,99.755)
C2: (43.309,99.820,96.723)
N1: (44.593,99.969,97.064)
N3: (42.221,100.313,97.307)
N6: (46.177,100.864,98.492)
N7: (43.773,102.102,99.985)
N9: (41.695,101.707,99.233)
O5': (38.371,104.911,101.296)
O3': (37.825,100.587,101.569)
Image (generated by PyMOL):