Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02399:02638
Extra
PDB:
ATOM 1 O3' U A2398 64.560 129.821 147.826 1.00 48.16 O
ATOM 2 P G A2399 64.110 128.895 149.064 1.00 48.62 P
ATOM 3 OP1 G A2399 64.300 129.675 150.313 1.00 46.57 O
ATOM 4 OP2 G A2399 64.787 127.576 148.907 1.00 46.92 O
ATOM 5 O5' G A2399 62.544 128.686 148.850 1.00 44.70 O
ATOM 6 C5' G A2399 61.619 129.770 149.038 1.00 40.88 C
ATOM 7 C4' G A2399 60.203 129.252 149.005 1.00 41.07 C
ATOM 8 O4' G A2399 59.904 128.723 147.683 1.00 40.55 O
ATOM 9 C3' G A2399 59.930 128.085 149.936 1.00 42.03 C
ATOM 10 O3' G A2399 59.685 128.521 151.266 1.00 45.10 O
ATOM 11 C2' G A2399 58.723 127.433 149.276 1.00 40.60 C
ATOM 12 O2' G A2399 57.523 128.144 149.516 1.00 41.11 O
ATOM 13 C1' G A2399 59.093 127.564 147.798 1.00 38.09 C
ATOM 14 N9 G A2399 59.864 126.423 147.311 1.00 35.34 N
ATOM 15 C8 G A2399 61.233 126.341 147.197 1.00 35.72 C
ATOM 16 N7 G A2399 61.643 125.187 146.742 1.00 35.53 N
ATOM 17 C5 G A2399 60.476 124.464 146.537 1.00 33.94 C
ATOM 18 C6 G A2399 60.290 123.150 146.040 1.00 33.81 C
ATOM 19 O6 G A2399 61.144 122.337 145.666 1.00 35.08 O
ATOM 20 N1 G A2399 58.944 122.812 145.988 1.00 34.02 N
ATOM 21 C2 G A2399 57.908 123.639 146.353 1.00 35.07 C
ATOM 22 N2 G A2399 56.669 123.138 146.201 1.00 33.60 N
ATOM 23 N3 G A2399 58.071 124.866 146.822 1.00 32.92 N
ATOM 24 C4 G A2399 59.369 125.212 146.884 1.00 33.87 C
ATOM 25 P C A2400 60.151 127.605 152.506 1.00 48.00 P
ATOM 26 OP1 C A2400 59.886 128.385 153.737 1.00 49.09 O
ATOM 27 OP2 C A2400 61.520 127.092 152.248 1.00 47.31 O
ATOM 28 O5' C A2400 59.152 126.366 152.460 1.00 47.29 O
TER
ATOM 1 O3' G B2637 52.588 125.457 154.586 1.00 50.44 O
ATOM 2 P A B2638 52.474 126.690 153.568 1.00 51.46 P
ATOM 3 OP1 A B2638 53.518 127.682 153.923 1.00 51.57 O
ATOM 4 OP2 A B2638 51.056 127.125 153.486 1.00 50.48 O
ATOM 5 O5' A B2638 52.904 126.041 152.182 1.00 53.21 O
ATOM 6 C5' A B2638 52.952 126.837 150.996 1.00 52.92 C
ATOM 7 C4' A B2638 54.096 126.405 150.119 1.00 52.39 C
ATOM 8 O4' A B2638 53.972 124.996 149.801 1.00 52.77 O
ATOM 9 C3' A B2638 54.088 127.112 148.781 1.00 51.90 C
ATOM 10 O3' A B2638 54.795 128.333 148.882 1.00 51.54 O
ATOM 11 C2' A B2638 54.782 126.117 147.870 1.00 51.28 C
ATOM 12 O2' A B2638 56.182 126.179 148.029 1.00 52.07 O
ATOM 13 C1' A B2638 54.255 124.792 148.427 1.00 50.86 C
ATOM 14 N9 A B2638 53.032 124.298 147.790 1.00 49.72 N
ATOM 15 C8 A B2638 51.777 124.227 148.347 1.00 48.14 C
ATOM 16 N7 A B2638 50.883 123.676 147.566 1.00 48.81 N
ATOM 17 C5 A B2638 51.589 123.380 146.408 1.00 48.63 C
ATOM 18 C6 A B2638 51.207 122.777 145.195 1.00 48.70 C
ATOM 19 N6 A B2638 49.977 122.321 144.947 1.00 45.91 N
ATOM 20 N1 A B2638 52.149 122.648 144.236 1.00 50.21 N
ATOM 21 C2 A B2638 53.388 123.085 144.493 1.00 49.27 C
ATOM 22 N3 A B2638 53.870 123.654 145.594 1.00 48.35 N
ATOM 23 C4 A B2638 52.909 123.775 146.525 1.00 48.46 C
ATOM 24 P A B2639 54.000 129.690 149.192 1.00 51.56 P
ATOM 25 OP1 A B2639 54.566 130.240 150.452 1.00 50.20 O
ATOM 26 OP2 A B2639 52.532 129.438 149.088 1.00 49.65 O
ATOM 27 O5' A B2639 54.445 130.651 148.006 1.00 50.22 O
TER
ATOM 2 P G A2399 64.110 128.895 149.064 1.00 48.62 P
ATOM 3 OP1 G A2399 64.300 129.675 150.313 1.00 46.57 O
ATOM 4 OP2 G A2399 64.787 127.576 148.907 1.00 46.92 O
ATOM 5 O5' G A2399 62.544 128.686 148.850 1.00 44.70 O
ATOM 6 C5' G A2399 61.619 129.770 149.038 1.00 40.88 C
ATOM 7 C4' G A2399 60.203 129.252 149.005 1.00 41.07 C
ATOM 8 O4' G A2399 59.904 128.723 147.683 1.00 40.55 O
ATOM 9 C3' G A2399 59.930 128.085 149.936 1.00 42.03 C
ATOM 10 O3' G A2399 59.685 128.521 151.266 1.00 45.10 O
ATOM 11 C2' G A2399 58.723 127.433 149.276 1.00 40.60 C
ATOM 12 O2' G A2399 57.523 128.144 149.516 1.00 41.11 O
ATOM 13 C1' G A2399 59.093 127.564 147.798 1.00 38.09 C
ATOM 14 N9 G A2399 59.864 126.423 147.311 1.00 35.34 N
ATOM 15 C8 G A2399 61.233 126.341 147.197 1.00 35.72 C
ATOM 16 N7 G A2399 61.643 125.187 146.742 1.00 35.53 N
ATOM 17 C5 G A2399 60.476 124.464 146.537 1.00 33.94 C
ATOM 18 C6 G A2399 60.290 123.150 146.040 1.00 33.81 C
ATOM 19 O6 G A2399 61.144 122.337 145.666 1.00 35.08 O
ATOM 20 N1 G A2399 58.944 122.812 145.988 1.00 34.02 N
ATOM 21 C2 G A2399 57.908 123.639 146.353 1.00 35.07 C
ATOM 22 N2 G A2399 56.669 123.138 146.201 1.00 33.60 N
ATOM 23 N3 G A2399 58.071 124.866 146.822 1.00 32.92 N
ATOM 24 C4 G A2399 59.369 125.212 146.884 1.00 33.87 C
ATOM 25 P C A2400 60.151 127.605 152.506 1.00 48.00 P
ATOM 26 OP1 C A2400 59.886 128.385 153.737 1.00 49.09 O
ATOM 27 OP2 C A2400 61.520 127.092 152.248 1.00 47.31 O
ATOM 28 O5' C A2400 59.152 126.366 152.460 1.00 47.29 O
TER
ATOM 1 O3' G B2637 52.588 125.457 154.586 1.00 50.44 O
ATOM 2 P A B2638 52.474 126.690 153.568 1.00 51.46 P
ATOM 3 OP1 A B2638 53.518 127.682 153.923 1.00 51.57 O
ATOM 4 OP2 A B2638 51.056 127.125 153.486 1.00 50.48 O
ATOM 5 O5' A B2638 52.904 126.041 152.182 1.00 53.21 O
ATOM 6 C5' A B2638 52.952 126.837 150.996 1.00 52.92 C
ATOM 7 C4' A B2638 54.096 126.405 150.119 1.00 52.39 C
ATOM 8 O4' A B2638 53.972 124.996 149.801 1.00 52.77 O
ATOM 9 C3' A B2638 54.088 127.112 148.781 1.00 51.90 C
ATOM 10 O3' A B2638 54.795 128.333 148.882 1.00 51.54 O
ATOM 11 C2' A B2638 54.782 126.117 147.870 1.00 51.28 C
ATOM 12 O2' A B2638 56.182 126.179 148.029 1.00 52.07 O
ATOM 13 C1' A B2638 54.255 124.792 148.427 1.00 50.86 C
ATOM 14 N9 A B2638 53.032 124.298 147.790 1.00 49.72 N
ATOM 15 C8 A B2638 51.777 124.227 148.347 1.00 48.14 C
ATOM 16 N7 A B2638 50.883 123.676 147.566 1.00 48.81 N
ATOM 17 C5 A B2638 51.589 123.380 146.408 1.00 48.63 C
ATOM 18 C6 A B2638 51.207 122.777 145.195 1.00 48.70 C
ATOM 19 N6 A B2638 49.977 122.321 144.947 1.00 45.91 N
ATOM 20 N1 A B2638 52.149 122.648 144.236 1.00 50.21 N
ATOM 21 C2 A B2638 53.388 123.085 144.493 1.00 49.27 C
ATOM 22 N3 A B2638 53.870 123.654 145.594 1.00 48.35 N
ATOM 23 C4 A B2638 52.909 123.775 146.525 1.00 48.46 C
ATOM 24 P A B2639 54.000 129.690 149.192 1.00 51.56 P
ATOM 25 OP1 A B2639 54.566 130.240 150.452 1.00 50.20 O
ATOM 26 OP2 A B2639 52.532 129.438 149.088 1.00 49.65 O
ATOM 27 O5' A B2639 54.445 130.651 148.006 1.00 50.22 O
TER
Atoms:
OP1: (64.300,129.675,150.313)
OP2: (64.787,127.576,148.907)
C3': (59.930,128.085,149.936)
C1': (59.093,127.564,147.798)
C5': (61.619,129.770,149.038)
O6: (61.144,122.337,145.666)
O4': (59.904,128.723,147.683)
C8: (61.233,126.341,147.197)
C2: (57.908,123.639,146.353)
C6: (60.290,123.150,146.040)
C5: (60.476,124.464,146.537)
C4: (59.369,125.212,146.884)
P: (64.110,128.895,149.064)
C4': (60.203,129.252,149.005)
C2': (58.723,127.433,149.276)
O2': (57.523,128.144,149.516)
N1: (58.944,122.812,145.988)
N2: (56.669,123.138,146.201)
N3: (58.071,124.866,146.822)
N7: (61.643,125.187,146.742)
N9: (59.864,126.423,147.311)
O5': (62.544,128.686,148.850)
O3': (59.685,128.521,151.266)
OP2: (64.787,127.576,148.907)
C3': (59.930,128.085,149.936)
C1': (59.093,127.564,147.798)
C5': (61.619,129.770,149.038)
O6: (61.144,122.337,145.666)
O4': (59.904,128.723,147.683)
C8: (61.233,126.341,147.197)
C2: (57.908,123.639,146.353)
C6: (60.290,123.150,146.040)
C5: (60.476,124.464,146.537)
C4: (59.369,125.212,146.884)
P: (64.110,128.895,149.064)
C4': (60.203,129.252,149.005)
C2': (58.723,127.433,149.276)
O2': (57.523,128.144,149.516)
N1: (58.944,122.812,145.988)
N2: (56.669,123.138,146.201)
N3: (58.071,124.866,146.822)
N7: (61.643,125.187,146.742)
N9: (59.864,126.423,147.311)
O5': (62.544,128.686,148.850)
O3': (59.685,128.521,151.266)
OP1: (53.518,127.682,153.923)
OP2: (51.056,127.125,153.486)
C3': (54.088,127.112,148.781)
C1': (54.255,124.792,148.427)
C5': (52.952,126.837,150.996)
O4': (53.972,124.996,149.801)
C8: (51.777,124.227,148.347)
O2': (56.182,126.179,148.029)
C6: (51.207,122.777,145.195)
C5: (51.589,123.380,146.408)
C4: (52.909,123.775,146.525)
P: (52.474,126.690,153.568)
C4': (54.096,126.405,150.119)
C2': (54.782,126.117,147.870)
C2: (53.388,123.085,144.493)
N1: (52.149,122.648,144.236)
N3: (53.870,123.654,145.594)
N6: (49.977,122.321,144.947)
N7: (50.883,123.676,147.566)
N9: (53.032,124.298,147.790)
O5': (52.904,126.041,152.182)
O3': (54.795,128.333,148.882)
OP2: (51.056,127.125,153.486)
C3': (54.088,127.112,148.781)
C1': (54.255,124.792,148.427)
C5': (52.952,126.837,150.996)
O4': (53.972,124.996,149.801)
C8: (51.777,124.227,148.347)
O2': (56.182,126.179,148.029)
C6: (51.207,122.777,145.195)
C5: (51.589,123.380,146.408)
C4: (52.909,123.775,146.525)
P: (52.474,126.690,153.568)
C4': (54.096,126.405,150.119)
C2': (54.782,126.117,147.870)
C2: (53.388,123.085,144.493)
N1: (52.149,122.648,144.236)
N3: (53.870,123.654,145.594)
N6: (49.977,122.321,144.947)
N7: (50.883,123.676,147.566)
N9: (53.032,124.298,147.790)
O5': (52.904,126.041,152.182)
O3': (54.795,128.333,148.882)
Image (generated by PyMOL):