Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2OTJ:01039:01040
Extra
PDB:
ATOM 1 O3' A A1038 34.450 110.576 106.057 1.00 45.89 O
ATOM 2 P C A1039 34.315 109.452 104.921 1.00 48.62 P
ATOM 3 OP1 C A1039 34.279 110.184 103.631 1.00 46.02 O
ATOM 4 OP2 C A1039 33.213 108.512 105.266 1.00 47.35 O
ATOM 5 O5' C A1039 35.673 108.630 105.019 1.00 48.22 O
ATOM 6 C5' C A1039 36.752 108.860 104.110 1.00 49.30 C
ATOM 7 C4' C A1039 37.853 107.877 104.389 1.00 50.52 C
ATOM 8 O4' C A1039 38.223 108.004 105.792 1.00 50.91 O
ATOM 9 C3' C A1039 37.445 106.416 104.300 1.00 52.11 C
ATOM 10 O3' C A1039 37.426 105.812 103.009 1.00 53.66 O
ATOM 11 C2' C A1039 38.542 105.776 105.131 1.00 52.52 C
ATOM 12 O2' C A1039 39.795 105.797 104.465 1.00 52.01 O
ATOM 13 C1' C A1039 38.579 106.732 106.315 1.00 52.15 C
ATOM 14 N1 C A1039 37.567 106.323 107.310 1.00 52.80 N
ATOM 15 C2 C A1039 37.955 105.485 108.382 1.00 53.76 C
ATOM 16 O2 C A1039 39.141 105.112 108.469 1.00 55.34 O
ATOM 17 N3 C A1039 37.029 105.107 109.293 1.00 53.26 N
ATOM 18 C4 C A1039 35.769 105.532 109.178 1.00 52.60 C
ATOM 19 N4 C A1039 34.900 105.163 110.126 1.00 52.45 N
ATOM 20 C5 C A1039 35.346 106.365 108.097 1.00 52.19 C
ATOM 21 C6 C A1039 36.269 106.735 107.197 1.00 52.44 C
ATOM 22 P A A1040 38.003 106.583 101.729 1.00 54.42 P
ATOM 23 OP1 A A1040 39.225 107.326 102.140 1.00 54.99 O
ATOM 24 OP2 A A1040 36.890 107.300 101.056 1.00 54.07 O
ATOM 25 O5' A A1040 38.463 105.375 100.802 1.00 51.98 O
TER
ATOM 1 O3' C B1039 37.426 105.812 103.009 1.00 53.66 O
ATOM 2 P A B1040 38.003 106.583 101.729 1.00 54.42 P
ATOM 3 OP1 A B1040 39.225 107.326 102.140 1.00 54.99 O
ATOM 4 OP2 A B1040 36.890 107.300 101.056 1.00 54.07 O
ATOM 5 O5' A B1040 38.463 105.375 100.802 1.00 51.98 O
ATOM 6 C5' A B1040 38.676 104.075 101.370 1.00 47.91 C
ATOM 7 C4' A B1040 38.639 103.027 100.295 1.00 46.62 C
ATOM 8 O4' A B1040 39.693 103.281 99.346 1.00 45.41 O
ATOM 9 C3' A B1040 38.902 101.613 100.773 1.00 46.01 C
ATOM 10 O3' A B1040 37.674 101.048 101.197 1.00 46.73 O
ATOM 11 C2' A B1040 39.381 100.932 99.504 1.00 44.83 C
ATOM 12 O2' A B1040 38.289 100.631 98.669 1.00 45.08 O
ATOM 13 C1' A B1040 40.172 102.057 98.837 1.00 44.40 C
ATOM 14 N9 A B1040 41.621 102.021 99.015 1.00 43.57 N
ATOM 15 C8 A B1040 42.371 102.606 100.000 1.00 43.02 C
ATOM 16 N7 A B1040 43.657 102.416 99.864 1.00 43.83 N
ATOM 17 C5 A B1040 43.761 101.646 98.715 1.00 43.89 C
ATOM 18 C6 A B1040 44.863 101.093 98.036 1.00 43.75 C
ATOM 19 N6 A B1040 46.128 101.223 98.440 1.00 43.96 N
ATOM 20 N1 A B1040 44.616 100.380 96.917 1.00 43.96 N
ATOM 21 C2 A B1040 43.349 100.222 96.525 1.00 42.90 C
ATOM 22 N3 A B1040 42.237 100.680 97.082 1.00 43.02 N
ATOM 23 C4 A B1040 42.515 101.394 98.185 1.00 43.32 C
ATOM 24 P A B1041 37.424 100.726 102.747 1.00 47.55 P
ATOM 25 OP1 A B1041 35.978 101.008 102.962 1.00 47.92 O
ATOM 26 OP2 A B1041 38.442 101.375 103.615 1.00 46.86 O
ATOM 27 O5' A B1041 37.631 99.156 102.807 1.00 46.05 O
TER
ATOM 2 P C A1039 34.315 109.452 104.921 1.00 48.62 P
ATOM 3 OP1 C A1039 34.279 110.184 103.631 1.00 46.02 O
ATOM 4 OP2 C A1039 33.213 108.512 105.266 1.00 47.35 O
ATOM 5 O5' C A1039 35.673 108.630 105.019 1.00 48.22 O
ATOM 6 C5' C A1039 36.752 108.860 104.110 1.00 49.30 C
ATOM 7 C4' C A1039 37.853 107.877 104.389 1.00 50.52 C
ATOM 8 O4' C A1039 38.223 108.004 105.792 1.00 50.91 O
ATOM 9 C3' C A1039 37.445 106.416 104.300 1.00 52.11 C
ATOM 10 O3' C A1039 37.426 105.812 103.009 1.00 53.66 O
ATOM 11 C2' C A1039 38.542 105.776 105.131 1.00 52.52 C
ATOM 12 O2' C A1039 39.795 105.797 104.465 1.00 52.01 O
ATOM 13 C1' C A1039 38.579 106.732 106.315 1.00 52.15 C
ATOM 14 N1 C A1039 37.567 106.323 107.310 1.00 52.80 N
ATOM 15 C2 C A1039 37.955 105.485 108.382 1.00 53.76 C
ATOM 16 O2 C A1039 39.141 105.112 108.469 1.00 55.34 O
ATOM 17 N3 C A1039 37.029 105.107 109.293 1.00 53.26 N
ATOM 18 C4 C A1039 35.769 105.532 109.178 1.00 52.60 C
ATOM 19 N4 C A1039 34.900 105.163 110.126 1.00 52.45 N
ATOM 20 C5 C A1039 35.346 106.365 108.097 1.00 52.19 C
ATOM 21 C6 C A1039 36.269 106.735 107.197 1.00 52.44 C
ATOM 22 P A A1040 38.003 106.583 101.729 1.00 54.42 P
ATOM 23 OP1 A A1040 39.225 107.326 102.140 1.00 54.99 O
ATOM 24 OP2 A A1040 36.890 107.300 101.056 1.00 54.07 O
ATOM 25 O5' A A1040 38.463 105.375 100.802 1.00 51.98 O
TER
ATOM 1 O3' C B1039 37.426 105.812 103.009 1.00 53.66 O
ATOM 2 P A B1040 38.003 106.583 101.729 1.00 54.42 P
ATOM 3 OP1 A B1040 39.225 107.326 102.140 1.00 54.99 O
ATOM 4 OP2 A B1040 36.890 107.300 101.056 1.00 54.07 O
ATOM 5 O5' A B1040 38.463 105.375 100.802 1.00 51.98 O
ATOM 6 C5' A B1040 38.676 104.075 101.370 1.00 47.91 C
ATOM 7 C4' A B1040 38.639 103.027 100.295 1.00 46.62 C
ATOM 8 O4' A B1040 39.693 103.281 99.346 1.00 45.41 O
ATOM 9 C3' A B1040 38.902 101.613 100.773 1.00 46.01 C
ATOM 10 O3' A B1040 37.674 101.048 101.197 1.00 46.73 O
ATOM 11 C2' A B1040 39.381 100.932 99.504 1.00 44.83 C
ATOM 12 O2' A B1040 38.289 100.631 98.669 1.00 45.08 O
ATOM 13 C1' A B1040 40.172 102.057 98.837 1.00 44.40 C
ATOM 14 N9 A B1040 41.621 102.021 99.015 1.00 43.57 N
ATOM 15 C8 A B1040 42.371 102.606 100.000 1.00 43.02 C
ATOM 16 N7 A B1040 43.657 102.416 99.864 1.00 43.83 N
ATOM 17 C5 A B1040 43.761 101.646 98.715 1.00 43.89 C
ATOM 18 C6 A B1040 44.863 101.093 98.036 1.00 43.75 C
ATOM 19 N6 A B1040 46.128 101.223 98.440 1.00 43.96 N
ATOM 20 N1 A B1040 44.616 100.380 96.917 1.00 43.96 N
ATOM 21 C2 A B1040 43.349 100.222 96.525 1.00 42.90 C
ATOM 22 N3 A B1040 42.237 100.680 97.082 1.00 43.02 N
ATOM 23 C4 A B1040 42.515 101.394 98.185 1.00 43.32 C
ATOM 24 P A B1041 37.424 100.726 102.747 1.00 47.55 P
ATOM 25 OP1 A B1041 35.978 101.008 102.962 1.00 47.92 O
ATOM 26 OP2 A B1041 38.442 101.375 103.615 1.00 46.86 O
ATOM 27 O5' A B1041 37.631 99.156 102.807 1.00 46.05 O
TER
Atoms:
C2: (37.955,105.485,108.382)
OP1: (34.279,110.184,103.631)
OP2: (33.213,108.512,105.266)
C4: (35.769,105.532,109.178)
O5': (35.673,108.630,105.019)
C3': (37.445,106.416,104.300)
C1': (38.579,106.732,106.315)
O4': (38.223,108.004,105.792)
C5': (36.752,108.860,104.110)
P: (34.315,109.452,104.921)
O2: (39.141,105.112,108.469)
C4': (37.853,107.877,104.389)
C2': (38.542,105.776,105.131)
O2': (39.795,105.797,104.465)
N1: (37.567,106.323,107.310)
N3: (37.029,105.107,109.293)
N4: (34.900,105.163,110.126)
C6: (36.269,106.735,107.197)
C5: (35.346,106.365,108.097)
O3': (37.426,105.812,103.009)
OP1: (34.279,110.184,103.631)
OP2: (33.213,108.512,105.266)
C4: (35.769,105.532,109.178)
O5': (35.673,108.630,105.019)
C3': (37.445,106.416,104.300)
C1': (38.579,106.732,106.315)
O4': (38.223,108.004,105.792)
C5': (36.752,108.860,104.110)
P: (34.315,109.452,104.921)
O2: (39.141,105.112,108.469)
C4': (37.853,107.877,104.389)
C2': (38.542,105.776,105.131)
O2': (39.795,105.797,104.465)
N1: (37.567,106.323,107.310)
N3: (37.029,105.107,109.293)
N4: (34.900,105.163,110.126)
C6: (36.269,106.735,107.197)
C5: (35.346,106.365,108.097)
O3': (37.426,105.812,103.009)
OP1: (39.225,107.326,102.140)
OP2: (36.890,107.300,101.056)
C3': (38.902,101.613,100.773)
C1': (40.172,102.057,98.837)
C5': (38.676,104.075,101.370)
O4': (39.693,103.281,99.346)
C8: (42.371,102.606,100.000)
O2': (38.289,100.631,98.669)
C6: (44.863,101.093,98.036)
C5: (43.761,101.646,98.715)
C4: (42.515,101.394,98.185)
P: (38.003,106.583,101.729)
C4': (38.639,103.027,100.295)
C2': (39.381,100.932,99.504)
C2: (43.349,100.222,96.525)
N1: (44.616,100.380,96.917)
N3: (42.237,100.680,97.082)
N6: (46.128,101.223,98.440)
N7: (43.657,102.416,99.864)
N9: (41.621,102.021,99.015)
O5': (38.463,105.375,100.802)
O3': (37.674,101.048,101.197)
OP2: (36.890,107.300,101.056)
C3': (38.902,101.613,100.773)
C1': (40.172,102.057,98.837)
C5': (38.676,104.075,101.370)
O4': (39.693,103.281,99.346)
C8: (42.371,102.606,100.000)
O2': (38.289,100.631,98.669)
C6: (44.863,101.093,98.036)
C5: (43.761,101.646,98.715)
C4: (42.515,101.394,98.185)
P: (38.003,106.583,101.729)
C4': (38.639,103.027,100.295)
C2': (39.381,100.932,99.504)
C2: (43.349,100.222,96.525)
N1: (44.616,100.380,96.917)
N3: (42.237,100.680,97.082)
N6: (46.128,101.223,98.440)
N7: (43.657,102.416,99.864)
N9: (41.621,102.021,99.015)
O5': (38.463,105.375,100.802)
O3': (37.674,101.048,101.197)
Image (generated by PyMOL):