ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2OTL:01039:01040

Extra

PDB:
ATOM 1 O3' A A1038 34.705 111.445 106.593 1.00 37.09 O
ATOM 2 P C A1039 34.545 110.324 105.459 1.00 37.90 P
ATOM 3 OP1 C A1039 34.468 111.055 104.190 1.00 36.05 O
ATOM 4 OP2 C A1039 33.460 109.382 105.832 1.00 38.78 O
ATOM 5 O5' C A1039 35.909 109.515 105.518 1.00 39.31 O
ATOM 6 C5' C A1039 36.970 109.771 104.594 1.00 44.01 C
ATOM 7 C4' C A1039 38.085 108.791 104.834 1.00 47.35 C
ATOM 8 O4' C A1039 38.541 108.956 106.207 1.00 49.79 O
ATOM 9 C3' C A1039 37.676 107.327 104.795 1.00 49.87 C
ATOM 10 O3' C A1039 37.598 106.719 103.512 1.00 53.15 O
ATOM 11 C2' C A1039 38.806 106.710 105.599 1.00 51.31 C
ATOM 12 O2' C A1039 40.053 106.748 104.925 1.00 49.62 O
ATOM 13 C1' C A1039 38.862 107.685 106.763 1.00 49.38 C
ATOM 14 N1 C A1039 37.822 107.310 107.743 1.00 48.99 N
ATOM 15 C2 C A1039 38.160 106.429 108.782 1.00 49.99 C
ATOM 16 O2 C A1039 39.316 105.977 108.832 1.00 53.82 O
ATOM 17 N3 C A1039 37.220 106.087 109.695 1.00 47.07 N
ATOM 18 C4 C A1039 35.986 106.584 109.597 1.00 45.63 C
ATOM 19 N4 C A1039 35.098 106.241 110.531 1.00 43.90 N
ATOM 20 C5 C A1039 35.609 107.463 108.539 1.00 46.25 C
ATOM 21 C6 C A1039 36.549 107.799 107.645 1.00 45.86 C
ATOM 22 P A A1040 38.245 107.434 102.230 1.00 55.77 P
ATOM 23 OP1 A A1040 39.496 108.112 102.662 1.00 57.00 O
ATOM 24 OP2 A A1040 37.198 108.206 101.505 1.00 54.58 O
ATOM 25 O5' A A1040 38.683 106.193 101.341 1.00 48.68 O
TER

ATOM 1 O3' C B1039 37.598 106.719 103.512 1.00 53.15 O
ATOM 2 P A B1040 38.245 107.434 102.230 1.00 55.77 P
ATOM 3 OP1 A B1040 39.496 108.112 102.662 1.00 57.00 O
ATOM 4 OP2 A B1040 37.198 108.206 101.505 1.00 54.58 O
ATOM 5 O5' A B1040 38.683 106.193 101.341 1.00 48.68 O
ATOM 6 C5' A B1040 38.883 104.911 101.935 1.00 38.43 C
ATOM 7 C4' A B1040 38.893 103.865 100.870 1.00 36.81 C
ATOM 8 O4' A B1040 39.930 104.176 99.913 1.00 36.30 O
ATOM 9 C3' A B1040 39.222 102.466 101.335 1.00 37.15 C
ATOM 10 O3' A B1040 38.045 101.845 101.817 1.00 38.45 O
ATOM 11 C2' A B1040 39.696 101.819 100.042 1.00 37.98 C
ATOM 12 O2' A B1040 38.605 101.523 99.202 1.00 40.17 O
ATOM 13 C1' A B1040 40.460 102.973 99.389 1.00 36.29 C
ATOM 14 N9 A B1040 41.915 102.965 99.578 1.00 32.71 N
ATOM 15 C8 A B1040 42.663 103.585 100.542 1.00 29.93 C
ATOM 16 N7 A B1040 43.952 103.409 100.405 1.00 29.54 N
ATOM 17 C5 A B1040 44.063 102.611 99.277 1.00 31.95 C
ATOM 18 C6 A B1040 45.179 102.067 98.586 1.00 32.63 C
ATOM 19 N6 A B1040 46.446 102.253 98.946 1.00 30.50 N
ATOM 20 N1 A B1040 44.932 101.311 97.491 1.00 34.46 N
ATOM 21 C2 A B1040 43.663 101.119 97.120 1.00 32.60 C
ATOM 22 N3 A B1040 42.543 101.577 97.681 1.00 33.53 N
ATOM 23 C4 A B1040 42.815 102.323 98.764 1.00 32.04 C
ATOM 24 P A B1041 37.886 101.526 103.381 1.00 37.03 P
ATOM 25 OP1 A B1041 36.466 101.806 103.692 1.00 38.68 O
ATOM 26 OP2 A B1041 38.952 102.194 104.160 1.00 37.88 O
ATOM 27 O5' A B1041 38.131 99.961 103.463 1.00 37.06 O
TER

Atoms:
C2: (38.160,106.429,108.782)
OP1: (34.468,111.055,104.190)
OP2: (33.460,109.382,105.832)
C4: (35.986,106.584,109.597)
O5': (35.909,109.515,105.518)
C3': (37.676,107.327,104.795)
C1': (38.862,107.685,106.763)
O4': (38.541,108.956,106.207)
C5': (36.970,109.771,104.594)
P: (34.545,110.324,105.459)
O2: (39.316,105.977,108.832)
C4': (38.085,108.791,104.834)
C2': (38.806,106.710,105.599)
O2': (40.053,106.748,104.925)
N1: (37.822,107.310,107.743)
N3: (37.220,106.087,109.695)
N4: (35.098,106.241,110.531)
C6: (36.549,107.799,107.645)
C5: (35.609,107.463,108.539)
O3': (37.598,106.719,103.512)
OP1: (39.496,108.112,102.662)
OP2: (37.198,108.206,101.505)
C3': (39.222,102.466,101.335)
C1': (40.460,102.973,99.389)
C5': (38.883,104.911,101.935)
O4': (39.930,104.176,99.913)
C8: (42.663,103.585,100.542)
O2': (38.605,101.523,99.202)
C6: (45.179,102.067,98.586)
C5: (44.063,102.611,99.277)
C4: (42.815,102.323,98.764)
P: (38.245,107.434,102.230)
C4': (38.893,103.865,100.870)
C2': (39.696,101.819,100.042)
C2: (43.663,101.119,97.120)
N1: (44.932,101.311,97.491)
N3: (42.543,101.577,97.681)
N6: (46.446,102.253,98.946)
N7: (43.952,103.409,100.405)
N9: (41.915,102.965,99.578)
O5': (38.683,106.193,101.341)
O3': (38.045,101.845,101.817)
Image (generated by PyMOL):
PyMOL image
show in jmol