ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2QEX:01039:01040

Extra

PDB:
ATOM 1 O3' A A1038 35.028 112.311 107.189 1.00 37.37 O
ATOM 2 P C A1039 34.736 111.198 106.069 1.00 39.07 P
ATOM 3 OP1 C A1039 34.609 111.968 104.810 1.00 37.61 O
ATOM 4 OP2 C A1039 33.637 110.306 106.499 1.00 38.74 O
ATOM 5 O5' C A1039 36.055 110.313 106.014 1.00 40.03 O
ATOM 6 C5' C A1039 37.143 110.623 105.131 1.00 40.69 C
ATOM 7 C4' C A1039 38.266 109.650 105.373 1.00 43.26 C
ATOM 8 O4' C A1039 38.629 109.754 106.780 1.00 44.90 O
ATOM 9 C3' C A1039 37.887 108.180 105.245 1.00 45.52 C
ATOM 10 O3' C A1039 37.879 107.598 103.940 1.00 47.46 O
ATOM 11 C2' C A1039 38.981 107.538 106.078 1.00 46.66 C
ATOM 12 O2' C A1039 40.246 107.591 105.437 1.00 45.98 O
ATOM 13 C1' C A1039 39.004 108.476 107.277 1.00 46.24 C
ATOM 14 N1 C A1039 38.034 108.043 108.308 1.00 45.86 N
ATOM 15 C2 C A1039 38.500 107.298 109.409 1.00 47.12 C
ATOM 16 O2 C A1039 39.712 107.012 109.476 1.00 48.50 O
ATOM 17 N3 C A1039 37.620 106.909 110.367 1.00 45.52 N
ATOM 18 C4 C A1039 36.328 107.234 110.257 1.00 44.66 C
ATOM 19 N4 C A1039 35.501 106.856 111.240 1.00 44.04 N
ATOM 20 C5 C A1039 35.826 107.970 109.140 1.00 43.65 C
ATOM 21 C6 C A1039 36.704 108.351 108.201 1.00 43.78 C
ATOM 22 P A A1040 38.677 108.283 102.728 1.00 49.65 P
ATOM 23 OP1 A A1040 39.912 108.905 103.279 1.00 50.17 O
ATOM 24 OP2 A A1040 37.713 109.107 101.951 1.00 50.14 O
ATOM 25 O5' A A1040 39.127 107.044 101.830 1.00 44.47 O
TER

ATOM 1 O3' C B1039 37.879 107.598 103.940 1.00 47.46 O
ATOM 2 P A B1040 38.677 108.283 102.728 1.00 49.65 P
ATOM 3 OP1 A B1040 39.912 108.905 103.279 1.00 50.17 O
ATOM 4 OP2 A B1040 37.713 109.107 101.951 1.00 50.14 O
ATOM 5 O5' A B1040 39.127 107.044 101.830 1.00 44.47 O
ATOM 6 C5' A B1040 39.362 105.753 102.419 1.00 38.27 C
ATOM 7 C4' A B1040 39.269 104.672 101.371 1.00 35.93 C
ATOM 8 O4' A B1040 40.275 104.889 100.358 1.00 34.17 O
ATOM 9 C3' A B1040 39.532 103.263 101.874 1.00 35.35 C
ATOM 10 O3' A B1040 38.323 102.696 102.362 1.00 36.47 O
ATOM 11 C2' A B1040 39.986 102.540 100.615 1.00 33.73 C
ATOM 12 O2' A B1040 38.897 102.141 99.817 1.00 34.36 O
ATOM 13 C1' A B1040 40.750 103.646 99.885 1.00 33.28 C
ATOM 14 N9 A B1040 42.206 103.616 100.035 1.00 31.86 N
ATOM 15 C8 A B1040 42.979 104.191 101.009 1.00 30.71 C
ATOM 16 N7 A B1040 44.263 104.020 100.831 1.00 31.71 N
ATOM 17 C5 A B1040 44.340 103.272 99.667 1.00 31.93 C
ATOM 18 C6 A B1040 45.426 102.755 98.942 1.00 33.61 C
ATOM 19 N6 A B1040 46.703 102.910 99.300 1.00 33.37 N
ATOM 20 N1 A B1040 45.151 102.053 97.822 1.00 33.74 N
ATOM 21 C2 A B1040 43.877 101.878 97.476 1.00 31.06 C
ATOM 22 N3 A B1040 42.781 102.307 98.074 1.00 30.51 N
ATOM 23 C4 A B1040 43.082 103.008 99.174 1.00 29.97 C
ATOM 24 P A B1041 38.172 102.331 103.909 1.00 35.02 P
ATOM 25 OP1 A B1041 36.764 102.628 104.214 1.00 37.22 O
ATOM 26 OP2 A B1041 39.246 102.973 104.694 1.00 33.80 O
ATOM 27 O5' A B1041 38.395 100.760 103.966 1.00 33.42 O
TER

Atoms:
C2: (38.500,107.298,109.409)
OP1: (34.609,111.968,104.810)
OP2: (33.637,110.306,106.499)
C4: (36.328,107.234,110.257)
O5': (36.055,110.313,106.014)
C3': (37.887,108.180,105.245)
C1': (39.004,108.476,107.277)
O4': (38.629,109.754,106.780)
C5': (37.143,110.623,105.131)
P: (34.736,111.198,106.069)
O2: (39.712,107.012,109.476)
C4': (38.266,109.650,105.373)
C2': (38.981,107.538,106.078)
O2': (40.246,107.591,105.437)
N1: (38.034,108.043,108.308)
N3: (37.620,106.909,110.367)
N4: (35.501,106.856,111.240)
C6: (36.704,108.351,108.201)
C5: (35.826,107.970,109.140)
O3': (37.879,107.598,103.940)
OP1: (39.912,108.905,103.279)
OP2: (37.713,109.107,101.951)
C3': (39.532,103.263,101.874)
C1': (40.750,103.646,99.885)
C5': (39.362,105.753,102.419)
O4': (40.275,104.889,100.358)
C8: (42.979,104.191,101.009)
O2': (38.897,102.141,99.817)
C6: (45.426,102.755,98.942)
C5: (44.340,103.272,99.667)
C4: (43.082,103.008,99.174)
P: (38.677,108.283,102.728)
C4': (39.269,104.672,101.371)
C2': (39.986,102.540,100.615)
C2: (43.877,101.878,97.476)
N1: (45.151,102.053,97.822)
N3: (42.781,102.307,98.074)
N6: (46.703,102.910,99.300)
N7: (44.263,104.020,100.831)
N9: (42.206,103.616,100.035)
O5': (39.127,107.044,101.830)
O3': (38.323,102.696,102.362)
Image (generated by PyMOL):
PyMOL image
show in jmol