Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3PDR:A30:A33
Extra
PDB:
ATOM 1 O3' A A 29 40.805 61.495 7.893 1.00 38.73 O
ATOM 2 P G A 30 41.557 62.919 7.883 1.00 37.63 P
ATOM 3 OP1 G A 30 41.290 63.496 6.542 1.00 38.43 O
ATOM 4 OP2 G A 30 42.945 62.662 8.318 1.00 33.36 O
ATOM 5 O5' G A 30 40.808 63.772 8.986 1.00 33.75 O
ATOM 6 C5' G A 30 39.435 64.078 8.827 1.00 35.69 C
ATOM 7 C4' G A 30 38.925 64.816 10.033 1.00 37.59 C
ATOM 8 O4' G A 30 38.932 63.954 11.199 1.00 33.27 O
ATOM 9 C3' G A 30 39.774 66.000 10.451 1.00 35.87 C
ATOM 10 O3' G A 30 39.492 67.134 9.659 1.00 40.73 O
ATOM 11 C2' G A 30 39.402 66.157 11.916 1.00 34.89 C
ATOM 12 O2' G A 30 38.117 66.751 12.034 1.00 32.98 O
ATOM 13 C1' G A 30 39.274 64.696 12.346 1.00 30.91 C
ATOM 14 N9 G A 30 40.520 64.120 12.887 1.00 30.43 N
ATOM 15 C8 G A 30 41.522 63.490 12.186 1.00 30.61 C
ATOM 16 N7 G A 30 42.489 63.060 12.952 1.00 29.54 N
ATOM 17 C5 G A 30 42.092 63.414 14.240 1.00 28.78 C
ATOM 18 C6 G A 30 42.728 63.217 15.495 1.00 27.60 C
ATOM 19 O6 G A 30 43.803 62.657 15.723 1.00 28.56 O
ATOM 20 N1 G A 30 41.978 63.732 16.552 1.00 26.40 N
ATOM 21 C2 G A 30 40.768 64.361 16.413 1.00 24.08 C
ATOM 22 N2 G A 30 40.174 64.796 17.538 1.00 24.47 N
ATOM 23 N3 G A 30 40.170 64.553 15.245 1.00 26.76 N
ATOM 24 C4 G A 30 40.878 64.055 14.214 1.00 27.96 C
ATOM 25 P A A 31 40.668 68.080 9.118 1.00 45.03 P
ATOM 26 OP1 A A 31 40.041 68.641 7.896 1.00 44.59 O
ATOM 27 OP2 A A 31 42.003 67.407 9.079 1.00 34.35 O
ATOM 28 O5' A A 31 40.712 69.197 10.249 1.00 37.36 O
TER
ATOM 1 O3' U B 32 35.852 75.836 11.344 1.00 60.28 O
ATOM 2 P A B 33 35.153 75.578 12.766 1.00 59.94 P
ATOM 3 OP1 A B 33 33.698 75.491 12.480 1.00 63.51 O
ATOM 4 OP2 A B 33 35.600 76.549 13.794 1.00 59.81 O
ATOM 5 O5' A B 33 35.747 74.142 13.091 1.00 53.42 O
ATOM 6 C5' A B 33 34.910 73.014 12.926 1.00 49.91 C
ATOM 7 C4' A B 33 35.638 71.862 12.289 1.00 47.33 C
ATOM 8 O4' A B 33 36.873 71.603 13.000 1.00 44.41 O
ATOM 9 C3' A B 33 34.856 70.563 12.328 1.00 44.68 C
ATOM 10 O3' A B 33 34.079 70.439 11.153 1.00 50.47 O
ATOM 11 C2' A B 33 35.919 69.481 12.467 1.00 43.75 C
ATOM 12 O2' A B 33 36.390 69.070 11.191 1.00 45.36 O
ATOM 13 C1' A B 33 37.058 70.218 13.176 1.00 39.22 C
ATOM 14 N9 A B 33 37.172 69.953 14.624 1.00 36.91 N
ATOM 15 C8 A B 33 37.088 70.877 15.634 1.00 33.51 C
ATOM 16 N7 A B 33 37.255 70.368 16.826 1.00 32.55 N
ATOM 17 C5 A B 33 37.469 69.025 16.595 1.00 31.47 C
ATOM 18 C6 A B 33 37.710 67.946 17.467 1.00 31.17 C
ATOM 19 N6 A B 33 37.786 68.055 18.803 1.00 25.07 N
ATOM 20 N1 A B 33 37.877 66.732 16.895 1.00 31.28 N
ATOM 21 C2 A B 33 37.815 66.615 15.558 1.00 32.76 C
ATOM 22 N3 A B 33 37.590 67.558 14.646 1.00 34.68 N
ATOM 23 C4 A B 33 37.426 68.752 15.237 1.00 34.26 C
ATOM 24 P C B 34 32.582 69.882 11.171 1.00 58.52 P
ATOM 25 OP1 C B 34 32.147 69.981 9.754 1.00 57.88 O
ATOM 26 OP2 C B 34 31.820 70.604 12.227 1.00 46.19 O
ATOM 27 O5' C B 34 32.837 68.355 11.551 1.00 52.51 O
TER
ATOM 2 P G A 30 41.557 62.919 7.883 1.00 37.63 P
ATOM 3 OP1 G A 30 41.290 63.496 6.542 1.00 38.43 O
ATOM 4 OP2 G A 30 42.945 62.662 8.318 1.00 33.36 O
ATOM 5 O5' G A 30 40.808 63.772 8.986 1.00 33.75 O
ATOM 6 C5' G A 30 39.435 64.078 8.827 1.00 35.69 C
ATOM 7 C4' G A 30 38.925 64.816 10.033 1.00 37.59 C
ATOM 8 O4' G A 30 38.932 63.954 11.199 1.00 33.27 O
ATOM 9 C3' G A 30 39.774 66.000 10.451 1.00 35.87 C
ATOM 10 O3' G A 30 39.492 67.134 9.659 1.00 40.73 O
ATOM 11 C2' G A 30 39.402 66.157 11.916 1.00 34.89 C
ATOM 12 O2' G A 30 38.117 66.751 12.034 1.00 32.98 O
ATOM 13 C1' G A 30 39.274 64.696 12.346 1.00 30.91 C
ATOM 14 N9 G A 30 40.520 64.120 12.887 1.00 30.43 N
ATOM 15 C8 G A 30 41.522 63.490 12.186 1.00 30.61 C
ATOM 16 N7 G A 30 42.489 63.060 12.952 1.00 29.54 N
ATOM 17 C5 G A 30 42.092 63.414 14.240 1.00 28.78 C
ATOM 18 C6 G A 30 42.728 63.217 15.495 1.00 27.60 C
ATOM 19 O6 G A 30 43.803 62.657 15.723 1.00 28.56 O
ATOM 20 N1 G A 30 41.978 63.732 16.552 1.00 26.40 N
ATOM 21 C2 G A 30 40.768 64.361 16.413 1.00 24.08 C
ATOM 22 N2 G A 30 40.174 64.796 17.538 1.00 24.47 N
ATOM 23 N3 G A 30 40.170 64.553 15.245 1.00 26.76 N
ATOM 24 C4 G A 30 40.878 64.055 14.214 1.00 27.96 C
ATOM 25 P A A 31 40.668 68.080 9.118 1.00 45.03 P
ATOM 26 OP1 A A 31 40.041 68.641 7.896 1.00 44.59 O
ATOM 27 OP2 A A 31 42.003 67.407 9.079 1.00 34.35 O
ATOM 28 O5' A A 31 40.712 69.197 10.249 1.00 37.36 O
TER
ATOM 1 O3' U B 32 35.852 75.836 11.344 1.00 60.28 O
ATOM 2 P A B 33 35.153 75.578 12.766 1.00 59.94 P
ATOM 3 OP1 A B 33 33.698 75.491 12.480 1.00 63.51 O
ATOM 4 OP2 A B 33 35.600 76.549 13.794 1.00 59.81 O
ATOM 5 O5' A B 33 35.747 74.142 13.091 1.00 53.42 O
ATOM 6 C5' A B 33 34.910 73.014 12.926 1.00 49.91 C
ATOM 7 C4' A B 33 35.638 71.862 12.289 1.00 47.33 C
ATOM 8 O4' A B 33 36.873 71.603 13.000 1.00 44.41 O
ATOM 9 C3' A B 33 34.856 70.563 12.328 1.00 44.68 C
ATOM 10 O3' A B 33 34.079 70.439 11.153 1.00 50.47 O
ATOM 11 C2' A B 33 35.919 69.481 12.467 1.00 43.75 C
ATOM 12 O2' A B 33 36.390 69.070 11.191 1.00 45.36 O
ATOM 13 C1' A B 33 37.058 70.218 13.176 1.00 39.22 C
ATOM 14 N9 A B 33 37.172 69.953 14.624 1.00 36.91 N
ATOM 15 C8 A B 33 37.088 70.877 15.634 1.00 33.51 C
ATOM 16 N7 A B 33 37.255 70.368 16.826 1.00 32.55 N
ATOM 17 C5 A B 33 37.469 69.025 16.595 1.00 31.47 C
ATOM 18 C6 A B 33 37.710 67.946 17.467 1.00 31.17 C
ATOM 19 N6 A B 33 37.786 68.055 18.803 1.00 25.07 N
ATOM 20 N1 A B 33 37.877 66.732 16.895 1.00 31.28 N
ATOM 21 C2 A B 33 37.815 66.615 15.558 1.00 32.76 C
ATOM 22 N3 A B 33 37.590 67.558 14.646 1.00 34.68 N
ATOM 23 C4 A B 33 37.426 68.752 15.237 1.00 34.26 C
ATOM 24 P C B 34 32.582 69.882 11.171 1.00 58.52 P
ATOM 25 OP1 C B 34 32.147 69.981 9.754 1.00 57.88 O
ATOM 26 OP2 C B 34 31.820 70.604 12.227 1.00 46.19 O
ATOM 27 O5' C B 34 32.837 68.355 11.551 1.00 52.51 O
TER
Atoms:
OP1: (41.290,63.496,6.542)
OP2: (42.945,62.662,8.318)
C3': (39.774,66.000,10.451)
C1': (39.274,64.696,12.346)
C5': (39.435,64.078,8.827)
O6: (43.803,62.657,15.723)
O4': (38.932,63.954,11.199)
C8: (41.522,63.490,12.186)
C2: (40.768,64.361,16.413)
C6: (42.728,63.217,15.495)
C5: (42.092,63.414,14.240)
C4: (40.878,64.055,14.214)
P: (41.557,62.919,7.883)
C4': (38.925,64.816,10.033)
C2': (39.402,66.157,11.916)
O2': (38.117,66.751,12.034)
N1: (41.978,63.732,16.552)
N2: (40.174,64.796,17.538)
N3: (40.170,64.553,15.245)
N7: (42.489,63.060,12.952)
N9: (40.520,64.120,12.887)
O5': (40.808,63.772,8.986)
O3': (39.492,67.134,9.659)
OP2: (42.945,62.662,8.318)
C3': (39.774,66.000,10.451)
C1': (39.274,64.696,12.346)
C5': (39.435,64.078,8.827)
O6: (43.803,62.657,15.723)
O4': (38.932,63.954,11.199)
C8: (41.522,63.490,12.186)
C2: (40.768,64.361,16.413)
C6: (42.728,63.217,15.495)
C5: (42.092,63.414,14.240)
C4: (40.878,64.055,14.214)
P: (41.557,62.919,7.883)
C4': (38.925,64.816,10.033)
C2': (39.402,66.157,11.916)
O2': (38.117,66.751,12.034)
N1: (41.978,63.732,16.552)
N2: (40.174,64.796,17.538)
N3: (40.170,64.553,15.245)
N7: (42.489,63.060,12.952)
N9: (40.520,64.120,12.887)
O5': (40.808,63.772,8.986)
O3': (39.492,67.134,9.659)
OP1: (33.698,75.491,12.480)
OP2: (35.600,76.549,13.794)
C3': (34.856,70.563,12.328)
C1': (37.058,70.218,13.176)
C5': (34.910,73.014,12.926)
O4': (36.873,71.603,13.000)
C8: (37.088,70.877,15.634)
O2': (36.390,69.070,11.191)
C6: (37.710,67.946,17.467)
C5: (37.469,69.025,16.595)
C4: (37.426,68.752,15.237)
P: (35.153,75.578,12.766)
C4': (35.638,71.862,12.289)
C2': (35.919,69.481,12.467)
C2: (37.815,66.615,15.558)
N1: (37.877,66.732,16.895)
N3: (37.590,67.558,14.646)
N6: (37.786,68.055,18.803)
N7: (37.255,70.368,16.826)
N9: (37.172,69.953,14.624)
O5': (35.747,74.142,13.091)
O3': (34.079,70.439,11.153)
OP2: (35.600,76.549,13.794)
C3': (34.856,70.563,12.328)
C1': (37.058,70.218,13.176)
C5': (34.910,73.014,12.926)
O4': (36.873,71.603,13.000)
C8: (37.088,70.877,15.634)
O2': (36.390,69.070,11.191)
C6: (37.710,67.946,17.467)
C5: (37.469,69.025,16.595)
C4: (37.426,68.752,15.237)
P: (35.153,75.578,12.766)
C4': (35.638,71.862,12.289)
C2': (35.919,69.481,12.467)
C2: (37.815,66.615,15.558)
N1: (37.877,66.732,16.895)
N3: (37.590,67.558,14.646)
N6: (37.786,68.055,18.803)
N7: (37.255,70.368,16.826)
N9: (37.172,69.953,14.624)
O5': (35.747,74.142,13.091)
O3': (34.079,70.439,11.153)
Image (generated by PyMOL):