Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1917:A1905
Extra
PDB:
ATOM 1 O3' G A1916 116.837 104.517 101.460 1.00 64.68 O
ATOM 2 P G A1917 117.635 105.891 101.781 1.00 64.02 P
ATOM 3 OP1 G A1917 119.035 105.764 101.298 1.00 63.22 O
ATOM 4 OP2 G A1917 117.382 106.267 103.195 1.00 62.11 O
ATOM 5 O5' G A1917 116.842 106.957 100.899 1.00 65.61 O
ATOM 6 C5' G A1917 117.514 108.036 100.239 1.00 65.73 C
ATOM 7 C4' G A1917 116.945 109.378 100.674 1.00 66.41 C
ATOM 8 O4' G A1917 115.715 109.700 99.965 1.00 67.24 O
ATOM 9 C3' G A1917 116.628 109.579 102.165 1.00 66.83 C
ATOM 10 O3' G A1917 116.979 110.932 102.507 1.00 66.90 O
ATOM 11 C2' G A1917 115.108 109.524 102.173 1.00 66.96 C
ATOM 12 O2' G A1917 114.503 110.185 103.257 1.00 67.68 O
ATOM 13 C1' G A1917 114.836 110.292 100.889 1.00 67.30 C
ATOM 14 N9 G A1917 113.476 110.387 100.360 1.00 67.46 N
ATOM 15 C8 G A1917 112.377 109.629 100.691 1.00 68.00 C
ATOM 16 N7 G A1917 111.283 110.037 100.109 1.00 68.48 N
ATOM 17 C5 G A1917 111.689 111.116 99.332 1.00 68.32 C
ATOM 18 C6 G A1917 110.941 111.977 98.483 1.00 69.35 C
ATOM 19 O6 G A1917 109.711 111.990 98.279 1.00 71.14 O
ATOM 20 N1 G A1917 111.763 112.907 97.850 1.00 67.83 N
ATOM 21 C2 G A1917 113.118 113.005 98.026 1.00 66.22 C
ATOM 22 N2 G A1917 113.747 113.919 97.291 1.00 63.99 N
ATOM 23 N3 G A1917 113.809 112.247 98.848 1.00 66.51 N
ATOM 24 C4 G A1917 113.040 111.325 99.457 1.00 67.16 C
ATOM 25 P U A1918 117.074 111.412 104.052 1.00 67.22 P
ATOM 26 OP1 U A1918 117.259 110.245 104.951 1.00 67.32 O
ATOM 27 OP2 U A1918 115.969 112.371 104.336 1.00 66.45 O
ATOM 28 O5' U A1918 118.448 112.214 104.047 1.00 66.58 O
TER
ATOM 1 O3' C B1904 111.193 105.966 99.494 1.00 75.52 O
ATOM 2 P G B1905 110.324 106.518 100.716 1.00 78.94 P
ATOM 3 OP1 G B1905 109.508 107.652 100.215 1.00 79.04 O
ATOM 4 OP2 G B1905 111.222 106.708 101.890 1.00 78.20 O
ATOM 5 O5' G B1905 109.326 105.320 101.016 1.00 82.08 O
ATOM 6 C5' G B1905 109.604 104.380 102.040 1.00 86.87 C
ATOM 7 C4' G B1905 108.830 103.123 101.794 1.00 90.06 C
ATOM 8 O4' G B1905 109.232 102.545 100.528 1.00 89.95 O
ATOM 9 C3' G B1905 109.156 102.048 102.797 1.00 92.31 C
ATOM 10 O3' G B1905 108.443 102.229 103.985 1.00 96.91 O
ATOM 11 C2' G B1905 108.801 100.775 102.055 1.00 91.91 C
ATOM 12 O2' G B1905 107.420 100.459 102.048 1.00 92.58 O
ATOM 13 C1' G B1905 109.308 101.132 100.658 1.00 90.80 C
ATOM 14 N9 G B1905 110.710 100.755 100.557 1.00 89.73 N
ATOM 15 C8 G B1905 111.803 101.485 100.955 1.00 88.42 C
ATOM 16 N7 G B1905 112.931 100.868 100.749 1.00 87.81 N
ATOM 17 C5 G B1905 112.559 99.664 100.176 1.00 88.98 C
ATOM 18 C6 G B1905 113.346 98.588 99.729 1.00 89.15 C
ATOM 19 O6 G B1905 114.574 98.482 99.740 1.00 88.84 O
ATOM 20 N1 G B1905 112.560 97.558 99.221 1.00 89.97 N
ATOM 21 C2 G B1905 111.189 97.570 99.156 1.00 90.78 C
ATOM 22 N2 G B1905 110.611 96.489 98.661 1.00 90.76 N
ATOM 23 N3 G B1905 110.445 98.572 99.558 1.00 90.92 N
ATOM 24 C4 G B1905 111.191 99.580 100.055 1.00 89.94 C
ATOM 25 P G B1906 109.011 101.583 105.324 1.00100.45 P
ATOM 26 OP1 G B1906 108.188 102.136 106.427 1.00100.81 O
ATOM 27 OP2 G B1906 110.483 101.799 105.324 1.00 98.96 O
ATOM 28 O5' G B1906 108.693 100.031 105.120 1.00102.32 O
TER
ATOM 2 P G A1917 117.635 105.891 101.781 1.00 64.02 P
ATOM 3 OP1 G A1917 119.035 105.764 101.298 1.00 63.22 O
ATOM 4 OP2 G A1917 117.382 106.267 103.195 1.00 62.11 O
ATOM 5 O5' G A1917 116.842 106.957 100.899 1.00 65.61 O
ATOM 6 C5' G A1917 117.514 108.036 100.239 1.00 65.73 C
ATOM 7 C4' G A1917 116.945 109.378 100.674 1.00 66.41 C
ATOM 8 O4' G A1917 115.715 109.700 99.965 1.00 67.24 O
ATOM 9 C3' G A1917 116.628 109.579 102.165 1.00 66.83 C
ATOM 10 O3' G A1917 116.979 110.932 102.507 1.00 66.90 O
ATOM 11 C2' G A1917 115.108 109.524 102.173 1.00 66.96 C
ATOM 12 O2' G A1917 114.503 110.185 103.257 1.00 67.68 O
ATOM 13 C1' G A1917 114.836 110.292 100.889 1.00 67.30 C
ATOM 14 N9 G A1917 113.476 110.387 100.360 1.00 67.46 N
ATOM 15 C8 G A1917 112.377 109.629 100.691 1.00 68.00 C
ATOM 16 N7 G A1917 111.283 110.037 100.109 1.00 68.48 N
ATOM 17 C5 G A1917 111.689 111.116 99.332 1.00 68.32 C
ATOM 18 C6 G A1917 110.941 111.977 98.483 1.00 69.35 C
ATOM 19 O6 G A1917 109.711 111.990 98.279 1.00 71.14 O
ATOM 20 N1 G A1917 111.763 112.907 97.850 1.00 67.83 N
ATOM 21 C2 G A1917 113.118 113.005 98.026 1.00 66.22 C
ATOM 22 N2 G A1917 113.747 113.919 97.291 1.00 63.99 N
ATOM 23 N3 G A1917 113.809 112.247 98.848 1.00 66.51 N
ATOM 24 C4 G A1917 113.040 111.325 99.457 1.00 67.16 C
ATOM 25 P U A1918 117.074 111.412 104.052 1.00 67.22 P
ATOM 26 OP1 U A1918 117.259 110.245 104.951 1.00 67.32 O
ATOM 27 OP2 U A1918 115.969 112.371 104.336 1.00 66.45 O
ATOM 28 O5' U A1918 118.448 112.214 104.047 1.00 66.58 O
TER
ATOM 1 O3' C B1904 111.193 105.966 99.494 1.00 75.52 O
ATOM 2 P G B1905 110.324 106.518 100.716 1.00 78.94 P
ATOM 3 OP1 G B1905 109.508 107.652 100.215 1.00 79.04 O
ATOM 4 OP2 G B1905 111.222 106.708 101.890 1.00 78.20 O
ATOM 5 O5' G B1905 109.326 105.320 101.016 1.00 82.08 O
ATOM 6 C5' G B1905 109.604 104.380 102.040 1.00 86.87 C
ATOM 7 C4' G B1905 108.830 103.123 101.794 1.00 90.06 C
ATOM 8 O4' G B1905 109.232 102.545 100.528 1.00 89.95 O
ATOM 9 C3' G B1905 109.156 102.048 102.797 1.00 92.31 C
ATOM 10 O3' G B1905 108.443 102.229 103.985 1.00 96.91 O
ATOM 11 C2' G B1905 108.801 100.775 102.055 1.00 91.91 C
ATOM 12 O2' G B1905 107.420 100.459 102.048 1.00 92.58 O
ATOM 13 C1' G B1905 109.308 101.132 100.658 1.00 90.80 C
ATOM 14 N9 G B1905 110.710 100.755 100.557 1.00 89.73 N
ATOM 15 C8 G B1905 111.803 101.485 100.955 1.00 88.42 C
ATOM 16 N7 G B1905 112.931 100.868 100.749 1.00 87.81 N
ATOM 17 C5 G B1905 112.559 99.664 100.176 1.00 88.98 C
ATOM 18 C6 G B1905 113.346 98.588 99.729 1.00 89.15 C
ATOM 19 O6 G B1905 114.574 98.482 99.740 1.00 88.84 O
ATOM 20 N1 G B1905 112.560 97.558 99.221 1.00 89.97 N
ATOM 21 C2 G B1905 111.189 97.570 99.156 1.00 90.78 C
ATOM 22 N2 G B1905 110.611 96.489 98.661 1.00 90.76 N
ATOM 23 N3 G B1905 110.445 98.572 99.558 1.00 90.92 N
ATOM 24 C4 G B1905 111.191 99.580 100.055 1.00 89.94 C
ATOM 25 P G B1906 109.011 101.583 105.324 1.00100.45 P
ATOM 26 OP1 G B1906 108.188 102.136 106.427 1.00100.81 O
ATOM 27 OP2 G B1906 110.483 101.799 105.324 1.00 98.96 O
ATOM 28 O5' G B1906 108.693 100.031 105.120 1.00102.32 O
TER
Atoms:
OP1: (119.035,105.764,101.298)
OP2: (117.382,106.267,103.195)
C3': (116.628,109.579,102.165)
C1': (114.836,110.292,100.889)
C5': (117.514,108.036,100.239)
O6: (109.711,111.990,98.279)
O4': (115.715,109.700,99.965)
C8: (112.377,109.629,100.691)
C2: (113.118,113.005,98.026)
C6: (110.941,111.977,98.483)
C5: (111.689,111.116,99.332)
C4: (113.040,111.325,99.457)
P: (117.635,105.891,101.781)
C4': (116.945,109.378,100.674)
C2': (115.108,109.524,102.173)
O2': (114.503,110.185,103.257)
N1: (111.763,112.907,97.850)
N2: (113.747,113.919,97.291)
N3: (113.809,112.247,98.848)
N7: (111.283,110.037,100.109)
N9: (113.476,110.387,100.360)
O5': (116.842,106.957,100.899)
O3': (116.979,110.932,102.507)
OP2: (117.382,106.267,103.195)
C3': (116.628,109.579,102.165)
C1': (114.836,110.292,100.889)
C5': (117.514,108.036,100.239)
O6: (109.711,111.990,98.279)
O4': (115.715,109.700,99.965)
C8: (112.377,109.629,100.691)
C2: (113.118,113.005,98.026)
C6: (110.941,111.977,98.483)
C5: (111.689,111.116,99.332)
C4: (113.040,111.325,99.457)
P: (117.635,105.891,101.781)
C4': (116.945,109.378,100.674)
C2': (115.108,109.524,102.173)
O2': (114.503,110.185,103.257)
N1: (111.763,112.907,97.850)
N2: (113.747,113.919,97.291)
N3: (113.809,112.247,98.848)
N7: (111.283,110.037,100.109)
N9: (113.476,110.387,100.360)
O5': (116.842,106.957,100.899)
O3': (116.979,110.932,102.507)
OP1: (109.508,107.652,100.215)
OP2: (111.222,106.708,101.890)
C3': (109.156,102.048,102.797)
C1': (109.308,101.132,100.658)
C5': (109.604,104.380,102.040)
O6: (114.574,98.482,99.740)
O4': (109.232,102.545,100.528)
C8: (111.803,101.485,100.955)
C2: (111.189,97.570,99.156)
C6: (113.346,98.588,99.729)
C5: (112.559,99.664,100.176)
C4: (111.191,99.580,100.055)
P: (110.324,106.518,100.716)
C4': (108.830,103.123,101.794)
C2': (108.801,100.775,102.055)
O2': (107.420,100.459,102.048)
N1: (112.560,97.558,99.221)
N2: (110.611,96.489,98.661)
N3: (110.445,98.572,99.558)
N7: (112.931,100.868,100.749)
N9: (110.710,100.755,100.557)
O5': (109.326,105.320,101.016)
O3': (108.443,102.229,103.985)
OP2: (111.222,106.708,101.890)
C3': (109.156,102.048,102.797)
C1': (109.308,101.132,100.658)
C5': (109.604,104.380,102.040)
O6: (114.574,98.482,99.740)
O4': (109.232,102.545,100.528)
C8: (111.803,101.485,100.955)
C2: (111.189,97.570,99.156)
C6: (113.346,98.588,99.729)
C5: (112.559,99.664,100.176)
C4: (111.191,99.580,100.055)
P: (110.324,106.518,100.716)
C4': (108.830,103.123,101.794)
C2': (108.801,100.775,102.055)
O2': (107.420,100.459,102.048)
N1: (112.560,97.558,99.221)
N2: (110.611,96.489,98.661)
N3: (110.445,98.572,99.558)
N7: (112.931,100.868,100.749)
N9: (110.710,100.755,100.557)
O5': (109.326,105.320,101.016)
O3': (108.443,102.229,103.985)
Image (generated by PyMOL):