Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CPW:01039:01040
Extra
PDB:
ATOM 1 O3' A A1038 34.633 110.232 106.581 1.00 47.30 O
ATOM 2 P C A1039 34.311 109.096 105.498 1.00 50.07 P
ATOM 3 OP1 C A1039 34.182 109.804 104.200 1.00 50.99 O
ATOM 4 OP2 C A1039 33.214 108.211 105.969 1.00 49.97 O
ATOM 5 O5' C A1039 35.628 108.217 105.467 1.00 53.10 O
ATOM 6 C5' C A1039 36.776 108.614 104.708 1.00 56.72 C
ATOM 7 C4' C A1039 37.863 107.599 104.903 1.00 59.09 C
ATOM 8 O4' C A1039 38.304 107.654 106.286 1.00 60.33 O
ATOM 9 C3' C A1039 37.392 106.161 104.722 1.00 61.08 C
ATOM 10 O3' C A1039 37.394 105.640 103.397 1.00 60.96 O
ATOM 11 C2' C A1039 38.392 105.397 105.575 1.00 62.66 C
ATOM 12 O2' C A1039 39.636 105.225 104.908 1.00 63.54 O
ATOM 13 C1' C A1039 38.558 106.343 106.762 1.00 61.96 C
ATOM 14 N1 C A1039 37.568 106.024 107.812 1.00 63.31 N
ATOM 15 C2 C A1039 37.957 105.228 108.900 1.00 63.53 C
ATOM 16 O2 C A1039 39.134 104.842 108.974 1.00 67.54 O
ATOM 17 N3 C A1039 37.042 104.907 109.846 1.00 61.45 N
ATOM 18 C4 C A1039 35.790 105.368 109.747 1.00 61.94 C
ATOM 19 N4 C A1039 34.924 105.056 110.712 1.00 58.93 N
ATOM 20 C5 C A1039 35.371 106.181 108.657 1.00 62.75 C
ATOM 21 C6 C A1039 36.282 106.482 107.722 1.00 63.05 C
ATOM 22 P A A1040 38.228 106.359 102.236 1.00 60.21 P
ATOM 23 OP1 A A1040 39.506 106.877 102.799 1.00 61.47 O
ATOM 24 OP2 A A1040 37.312 107.278 101.516 1.00 60.89 O
ATOM 25 O5' A A1040 38.615 105.132 101.299 1.00 57.60 O
TER
ATOM 1 O3' C B1039 37.394 105.640 103.397 1.00 60.96 O
ATOM 2 P A B1040 38.228 106.359 102.236 1.00 60.21 P
ATOM 3 OP1 A B1040 39.506 106.877 102.799 1.00 61.47 O
ATOM 4 OP2 A B1040 37.312 107.278 101.516 1.00 60.89 O
ATOM 5 O5' A B1040 38.615 105.132 101.299 1.00 57.60 O
ATOM 6 C5' A B1040 38.891 103.840 101.869 1.00 50.12 C
ATOM 7 C4' A B1040 38.803 102.788 100.807 1.00 48.52 C
ATOM 8 O4' A B1040 39.816 103.038 99.808 1.00 46.70 O
ATOM 9 C3' A B1040 39.046 101.366 101.264 1.00 48.70 C
ATOM 10 O3' A B1040 37.815 100.813 101.722 1.00 51.47 O
ATOM 11 C2' A B1040 39.507 100.686 99.978 1.00 47.74 C
ATOM 12 O2' A B1040 38.408 100.325 99.167 1.00 49.11 O
ATOM 13 C1' A B1040 40.261 101.815 99.269 1.00 45.37 C
ATOM 14 N9 A B1040 41.719 101.765 99.378 1.00 43.66 N
ATOM 15 C8 A B1040 42.516 102.338 100.336 1.00 43.30 C
ATOM 16 N7 A B1040 43.795 102.131 100.148 1.00 43.24 N
ATOM 17 C5 A B1040 43.843 101.363 98.993 1.00 41.40 C
ATOM 18 C6 A B1040 44.912 100.798 98.271 1.00 41.41 C
ATOM 19 N6 A B1040 46.197 100.921 98.618 1.00 40.39 N
ATOM 20 N1 A B1040 44.613 100.085 97.166 1.00 39.87 N
ATOM 21 C2 A B1040 43.338 99.950 96.822 1.00 38.95 C
ATOM 22 N3 A B1040 42.252 100.424 97.418 1.00 41.24 N
ATOM 23 C4 A B1040 42.575 101.130 98.510 1.00 41.14 C
ATOM 24 P A B1041 37.632 100.401 103.268 1.00 49.85 P
ATOM 25 OP1 A B1041 36.199 100.666 103.582 1.00 48.36 O
ATOM 26 OP2 A B1041 38.698 101.020 104.103 1.00 50.58 O
ATOM 27 O5' A B1041 37.867 98.833 103.265 1.00 48.26 O
TER
ATOM 2 P C A1039 34.311 109.096 105.498 1.00 50.07 P
ATOM 3 OP1 C A1039 34.182 109.804 104.200 1.00 50.99 O
ATOM 4 OP2 C A1039 33.214 108.211 105.969 1.00 49.97 O
ATOM 5 O5' C A1039 35.628 108.217 105.467 1.00 53.10 O
ATOM 6 C5' C A1039 36.776 108.614 104.708 1.00 56.72 C
ATOM 7 C4' C A1039 37.863 107.599 104.903 1.00 59.09 C
ATOM 8 O4' C A1039 38.304 107.654 106.286 1.00 60.33 O
ATOM 9 C3' C A1039 37.392 106.161 104.722 1.00 61.08 C
ATOM 10 O3' C A1039 37.394 105.640 103.397 1.00 60.96 O
ATOM 11 C2' C A1039 38.392 105.397 105.575 1.00 62.66 C
ATOM 12 O2' C A1039 39.636 105.225 104.908 1.00 63.54 O
ATOM 13 C1' C A1039 38.558 106.343 106.762 1.00 61.96 C
ATOM 14 N1 C A1039 37.568 106.024 107.812 1.00 63.31 N
ATOM 15 C2 C A1039 37.957 105.228 108.900 1.00 63.53 C
ATOM 16 O2 C A1039 39.134 104.842 108.974 1.00 67.54 O
ATOM 17 N3 C A1039 37.042 104.907 109.846 1.00 61.45 N
ATOM 18 C4 C A1039 35.790 105.368 109.747 1.00 61.94 C
ATOM 19 N4 C A1039 34.924 105.056 110.712 1.00 58.93 N
ATOM 20 C5 C A1039 35.371 106.181 108.657 1.00 62.75 C
ATOM 21 C6 C A1039 36.282 106.482 107.722 1.00 63.05 C
ATOM 22 P A A1040 38.228 106.359 102.236 1.00 60.21 P
ATOM 23 OP1 A A1040 39.506 106.877 102.799 1.00 61.47 O
ATOM 24 OP2 A A1040 37.312 107.278 101.516 1.00 60.89 O
ATOM 25 O5' A A1040 38.615 105.132 101.299 1.00 57.60 O
TER
ATOM 1 O3' C B1039 37.394 105.640 103.397 1.00 60.96 O
ATOM 2 P A B1040 38.228 106.359 102.236 1.00 60.21 P
ATOM 3 OP1 A B1040 39.506 106.877 102.799 1.00 61.47 O
ATOM 4 OP2 A B1040 37.312 107.278 101.516 1.00 60.89 O
ATOM 5 O5' A B1040 38.615 105.132 101.299 1.00 57.60 O
ATOM 6 C5' A B1040 38.891 103.840 101.869 1.00 50.12 C
ATOM 7 C4' A B1040 38.803 102.788 100.807 1.00 48.52 C
ATOM 8 O4' A B1040 39.816 103.038 99.808 1.00 46.70 O
ATOM 9 C3' A B1040 39.046 101.366 101.264 1.00 48.70 C
ATOM 10 O3' A B1040 37.815 100.813 101.722 1.00 51.47 O
ATOM 11 C2' A B1040 39.507 100.686 99.978 1.00 47.74 C
ATOM 12 O2' A B1040 38.408 100.325 99.167 1.00 49.11 O
ATOM 13 C1' A B1040 40.261 101.815 99.269 1.00 45.37 C
ATOM 14 N9 A B1040 41.719 101.765 99.378 1.00 43.66 N
ATOM 15 C8 A B1040 42.516 102.338 100.336 1.00 43.30 C
ATOM 16 N7 A B1040 43.795 102.131 100.148 1.00 43.24 N
ATOM 17 C5 A B1040 43.843 101.363 98.993 1.00 41.40 C
ATOM 18 C6 A B1040 44.912 100.798 98.271 1.00 41.41 C
ATOM 19 N6 A B1040 46.197 100.921 98.618 1.00 40.39 N
ATOM 20 N1 A B1040 44.613 100.085 97.166 1.00 39.87 N
ATOM 21 C2 A B1040 43.338 99.950 96.822 1.00 38.95 C
ATOM 22 N3 A B1040 42.252 100.424 97.418 1.00 41.24 N
ATOM 23 C4 A B1040 42.575 101.130 98.510 1.00 41.14 C
ATOM 24 P A B1041 37.632 100.401 103.268 1.00 49.85 P
ATOM 25 OP1 A B1041 36.199 100.666 103.582 1.00 48.36 O
ATOM 26 OP2 A B1041 38.698 101.020 104.103 1.00 50.58 O
ATOM 27 O5' A B1041 37.867 98.833 103.265 1.00 48.26 O
TER
Atoms:
C2: (37.957,105.228,108.900)
OP1: (34.182,109.804,104.200)
OP2: (33.214,108.211,105.969)
C4: (35.790,105.368,109.747)
O5': (35.628,108.217,105.467)
C3': (37.392,106.161,104.722)
C1': (38.558,106.343,106.762)
O4': (38.304,107.654,106.286)
C5': (36.776,108.614,104.708)
P: (34.311,109.096,105.498)
O2: (39.134,104.842,108.974)
C4': (37.863,107.599,104.903)
C2': (38.392,105.397,105.575)
O2': (39.636,105.225,104.908)
N1: (37.568,106.024,107.812)
N3: (37.042,104.907,109.846)
N4: (34.924,105.056,110.712)
C6: (36.282,106.482,107.722)
C5: (35.371,106.181,108.657)
O3': (37.394,105.640,103.397)
OP1: (34.182,109.804,104.200)
OP2: (33.214,108.211,105.969)
C4: (35.790,105.368,109.747)
O5': (35.628,108.217,105.467)
C3': (37.392,106.161,104.722)
C1': (38.558,106.343,106.762)
O4': (38.304,107.654,106.286)
C5': (36.776,108.614,104.708)
P: (34.311,109.096,105.498)
O2: (39.134,104.842,108.974)
C4': (37.863,107.599,104.903)
C2': (38.392,105.397,105.575)
O2': (39.636,105.225,104.908)
N1: (37.568,106.024,107.812)
N3: (37.042,104.907,109.846)
N4: (34.924,105.056,110.712)
C6: (36.282,106.482,107.722)
C5: (35.371,106.181,108.657)
O3': (37.394,105.640,103.397)
OP1: (39.506,106.877,102.799)
OP2: (37.312,107.278,101.516)
C3': (39.046,101.366,101.264)
C1': (40.261,101.815,99.269)
C5': (38.891,103.840,101.869)
O4': (39.816,103.038,99.808)
C8: (42.516,102.338,100.336)
O2': (38.408,100.325,99.167)
C6: (44.912,100.798,98.271)
C5: (43.843,101.363,98.993)
C4: (42.575,101.130,98.510)
P: (38.228,106.359,102.236)
C4': (38.803,102.788,100.807)
C2': (39.507,100.686,99.978)
C2: (43.338,99.950,96.822)
N1: (44.613,100.085,97.166)
N3: (42.252,100.424,97.418)
N6: (46.197,100.921,98.618)
N7: (43.795,102.131,100.148)
N9: (41.719,101.765,99.378)
O5': (38.615,105.132,101.299)
O3': (37.815,100.813,101.722)
OP2: (37.312,107.278,101.516)
C3': (39.046,101.366,101.264)
C1': (40.261,101.815,99.269)
C5': (38.891,103.840,101.869)
O4': (39.816,103.038,99.808)
C8: (42.516,102.338,100.336)
O2': (38.408,100.325,99.167)
C6: (44.912,100.798,98.271)
C5: (43.843,101.363,98.993)
C4: (42.575,101.130,98.510)
P: (38.228,106.359,102.236)
C4': (38.803,102.788,100.807)
C2': (39.507,100.686,99.978)
C2: (43.338,99.950,96.822)
N1: (44.613,100.085,97.166)
N3: (42.252,100.424,97.418)
N6: (46.197,100.921,98.618)
N7: (43.795,102.131,100.148)
N9: (41.719,101.765,99.378)
O5': (38.615,105.132,101.299)
O3': (37.815,100.813,101.722)
Image (generated by PyMOL):