Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3MJB:A7:A8
Extra
PDB:
ATOM 1 O3' U A 6 12.962 -16.604 -14.450 1.00 64.01 O
ATOM 2 P C A 7 11.803 -15.688 -13.837 1.00 65.96 P
ATOM 3 OP1 C A 7 11.306 -16.394 -12.619 1.00 64.56 O
ATOM 4 OP2 C A 7 10.852 -15.290 -14.922 1.00 66.50 O
ATOM 5 O5' C A 7 12.572 -14.378 -13.383 1.00 63.99 O
ATOM 6 C5' C A 7 12.536 -13.988 -12.026 1.00 63.75 C
ATOM 7 C4' C A 7 13.455 -14.864 -11.204 1.00 60.89 C
ATOM 8 O4' C A 7 14.807 -14.750 -11.687 1.00 58.61 O
ATOM 9 C3' C A 7 13.501 -14.480 -9.748 1.00 60.28 C
ATOM 10 O3' C A 7 13.348 -15.615 -8.914 1.00 61.74 O
ATOM 11 C2' C A 7 14.726 -13.597 -9.584 1.00 60.27 C
ATOM 12 O2' C A 7 15.434 -14.038 -8.452 1.00 65.63 O
ATOM 13 C1' C A 7 15.572 -13.950 -10.815 1.00 56.66 C
ATOM 14 N1 C A 7 16.050 -12.801 -11.611 1.00 51.26 N
ATOM 15 C2 C A 7 17.327 -12.274 -11.364 1.00 49.58 C
ATOM 16 O2 C A 7 18.006 -12.755 -10.437 1.00 49.50 O
ATOM 17 N3 C A 7 17.786 -11.259 -12.147 1.00 46.82 N
ATOM 18 C4 C A 7 17.016 -10.774 -13.130 1.00 46.42 C
ATOM 19 N4 C A 7 17.497 -9.787 -13.883 1.00 44.23 N
ATOM 20 C5 C A 7 15.711 -11.282 -13.384 1.00 46.53 C
ATOM 21 C6 C A 7 15.270 -12.276 -12.604 1.00 48.83 C
ATOM 22 P A A 8 12.947 -15.444 -7.376 1.00 61.90 P
ATOM 23 OP1 A A 8 14.155 -15.607 -6.529 1.00 62.69 O
ATOM 24 OP2 A A 8 11.785 -16.345 -7.174 1.00 64.10 O
ATOM 25 O5' A A 8 12.442 -13.941 -7.261 1.00 61.68 O
TER
ATOM 1 O3' C B 7 13.348 -15.615 -8.914 1.00 61.74 O
ATOM 2 P A B 8 12.947 -15.444 -7.376 1.00 61.90 P
ATOM 3 OP1 A B 8 14.155 -15.607 -6.529 1.00 62.69 O
ATOM 4 OP2 A B 8 11.785 -16.345 -7.174 1.00 64.10 O
ATOM 5 O5' A B 8 12.442 -13.941 -7.261 1.00 61.68 O
ATOM 6 C5' A B 8 11.253 -13.517 -7.911 1.00 59.00 C
ATOM 7 C4' A B 8 10.235 -13.070 -6.894 1.00 56.64 C
ATOM 8 O4' A B 8 9.537 -14.203 -6.326 1.00 57.66 O
ATOM 9 C3' A B 8 10.775 -12.381 -5.665 1.00 55.78 C
ATOM 10 O3' A B 8 11.175 -11.058 -5.976 1.00 55.51 O
ATOM 11 C2' A B 8 9.575 -12.456 -4.725 1.00 56.36 C
ATOM 12 O2' A B 8 8.573 -11.506 -5.000 1.00 56.05 O
ATOM 13 C1' A B 8 9.010 -13.834 -5.064 1.00 55.84 C
ATOM 14 N9 A B 8 9.359 -14.865 -4.091 1.00 56.55 N
ATOM 15 C8 A B 8 10.100 -16.007 -4.278 1.00 56.57 C
ATOM 16 N7 A B 8 10.217 -16.744 -3.198 1.00 56.91 N
ATOM 17 C5 A B 8 9.506 -16.037 -2.237 1.00 56.39 C
ATOM 18 C6 A B 8 9.236 -16.293 -0.882 1.00 56.54 C
ATOM 19 N6 A B 8 9.662 -17.379 -0.235 1.00 57.75 N
ATOM 20 N1 A B 8 8.496 -15.386 -0.207 1.00 56.68 N
ATOM 21 C2 A B 8 8.058 -14.302 -0.862 1.00 56.29 C
ATOM 22 N3 A B 8 8.241 -13.954 -2.134 1.00 55.92 N
ATOM 23 C4 A B 8 8.980 -14.875 -2.772 1.00 55.57 C
ATOM 24 P G B 9 12.382 -10.390 -5.161 1.00 54.33 P
ATOM 25 OP1 G B 9 11.894 -10.261 -3.763 1.00 55.76 O
ATOM 26 OP2 G B 9 12.880 -9.190 -5.890 1.00 55.41 O
ATOM 27 O5' G B 9 13.536 -11.486 -5.199 1.00 52.73 O
TER
ATOM 2 P C A 7 11.803 -15.688 -13.837 1.00 65.96 P
ATOM 3 OP1 C A 7 11.306 -16.394 -12.619 1.00 64.56 O
ATOM 4 OP2 C A 7 10.852 -15.290 -14.922 1.00 66.50 O
ATOM 5 O5' C A 7 12.572 -14.378 -13.383 1.00 63.99 O
ATOM 6 C5' C A 7 12.536 -13.988 -12.026 1.00 63.75 C
ATOM 7 C4' C A 7 13.455 -14.864 -11.204 1.00 60.89 C
ATOM 8 O4' C A 7 14.807 -14.750 -11.687 1.00 58.61 O
ATOM 9 C3' C A 7 13.501 -14.480 -9.748 1.00 60.28 C
ATOM 10 O3' C A 7 13.348 -15.615 -8.914 1.00 61.74 O
ATOM 11 C2' C A 7 14.726 -13.597 -9.584 1.00 60.27 C
ATOM 12 O2' C A 7 15.434 -14.038 -8.452 1.00 65.63 O
ATOM 13 C1' C A 7 15.572 -13.950 -10.815 1.00 56.66 C
ATOM 14 N1 C A 7 16.050 -12.801 -11.611 1.00 51.26 N
ATOM 15 C2 C A 7 17.327 -12.274 -11.364 1.00 49.58 C
ATOM 16 O2 C A 7 18.006 -12.755 -10.437 1.00 49.50 O
ATOM 17 N3 C A 7 17.786 -11.259 -12.147 1.00 46.82 N
ATOM 18 C4 C A 7 17.016 -10.774 -13.130 1.00 46.42 C
ATOM 19 N4 C A 7 17.497 -9.787 -13.883 1.00 44.23 N
ATOM 20 C5 C A 7 15.711 -11.282 -13.384 1.00 46.53 C
ATOM 21 C6 C A 7 15.270 -12.276 -12.604 1.00 48.83 C
ATOM 22 P A A 8 12.947 -15.444 -7.376 1.00 61.90 P
ATOM 23 OP1 A A 8 14.155 -15.607 -6.529 1.00 62.69 O
ATOM 24 OP2 A A 8 11.785 -16.345 -7.174 1.00 64.10 O
ATOM 25 O5' A A 8 12.442 -13.941 -7.261 1.00 61.68 O
TER
ATOM 1 O3' C B 7 13.348 -15.615 -8.914 1.00 61.74 O
ATOM 2 P A B 8 12.947 -15.444 -7.376 1.00 61.90 P
ATOM 3 OP1 A B 8 14.155 -15.607 -6.529 1.00 62.69 O
ATOM 4 OP2 A B 8 11.785 -16.345 -7.174 1.00 64.10 O
ATOM 5 O5' A B 8 12.442 -13.941 -7.261 1.00 61.68 O
ATOM 6 C5' A B 8 11.253 -13.517 -7.911 1.00 59.00 C
ATOM 7 C4' A B 8 10.235 -13.070 -6.894 1.00 56.64 C
ATOM 8 O4' A B 8 9.537 -14.203 -6.326 1.00 57.66 O
ATOM 9 C3' A B 8 10.775 -12.381 -5.665 1.00 55.78 C
ATOM 10 O3' A B 8 11.175 -11.058 -5.976 1.00 55.51 O
ATOM 11 C2' A B 8 9.575 -12.456 -4.725 1.00 56.36 C
ATOM 12 O2' A B 8 8.573 -11.506 -5.000 1.00 56.05 O
ATOM 13 C1' A B 8 9.010 -13.834 -5.064 1.00 55.84 C
ATOM 14 N9 A B 8 9.359 -14.865 -4.091 1.00 56.55 N
ATOM 15 C8 A B 8 10.100 -16.007 -4.278 1.00 56.57 C
ATOM 16 N7 A B 8 10.217 -16.744 -3.198 1.00 56.91 N
ATOM 17 C5 A B 8 9.506 -16.037 -2.237 1.00 56.39 C
ATOM 18 C6 A B 8 9.236 -16.293 -0.882 1.00 56.54 C
ATOM 19 N6 A B 8 9.662 -17.379 -0.235 1.00 57.75 N
ATOM 20 N1 A B 8 8.496 -15.386 -0.207 1.00 56.68 N
ATOM 21 C2 A B 8 8.058 -14.302 -0.862 1.00 56.29 C
ATOM 22 N3 A B 8 8.241 -13.954 -2.134 1.00 55.92 N
ATOM 23 C4 A B 8 8.980 -14.875 -2.772 1.00 55.57 C
ATOM 24 P G B 9 12.382 -10.390 -5.161 1.00 54.33 P
ATOM 25 OP1 G B 9 11.894 -10.261 -3.763 1.00 55.76 O
ATOM 26 OP2 G B 9 12.880 -9.190 -5.890 1.00 55.41 O
ATOM 27 O5' G B 9 13.536 -11.486 -5.199 1.00 52.73 O
TER
Atoms:
C2: (17.327,-12.274,-11.364)
OP1: (11.306,-16.394,-12.619)
OP2: (10.852,-15.290,-14.922)
C4: (17.016,-10.774,-13.130)
O5': (12.572,-14.378,-13.383)
C3': (13.501,-14.480,-9.748)
C1': (15.572,-13.950,-10.815)
O4': (14.807,-14.750,-11.687)
C5': (12.536,-13.988,-12.026)
P: (11.803,-15.688,-13.837)
O2: (18.006,-12.755,-10.437)
C4': (13.455,-14.864,-11.204)
C2': (14.726,-13.597,-9.584)
O2': (15.434,-14.038,-8.452)
N1: (16.050,-12.801,-11.611)
N3: (17.786,-11.259,-12.147)
N4: (17.497,-9.787,-13.883)
C6: (15.270,-12.276,-12.604)
C5: (15.711,-11.282,-13.384)
O3': (13.348,-15.615,-8.914)
OP1: (11.306,-16.394,-12.619)
OP2: (10.852,-15.290,-14.922)
C4: (17.016,-10.774,-13.130)
O5': (12.572,-14.378,-13.383)
C3': (13.501,-14.480,-9.748)
C1': (15.572,-13.950,-10.815)
O4': (14.807,-14.750,-11.687)
C5': (12.536,-13.988,-12.026)
P: (11.803,-15.688,-13.837)
O2: (18.006,-12.755,-10.437)
C4': (13.455,-14.864,-11.204)
C2': (14.726,-13.597,-9.584)
O2': (15.434,-14.038,-8.452)
N1: (16.050,-12.801,-11.611)
N3: (17.786,-11.259,-12.147)
N4: (17.497,-9.787,-13.883)
C6: (15.270,-12.276,-12.604)
C5: (15.711,-11.282,-13.384)
O3': (13.348,-15.615,-8.914)
OP1: (14.155,-15.607,-6.529)
OP2: (11.785,-16.345,-7.174)
C3': (10.775,-12.381,-5.665)
C1': (9.010,-13.834,-5.064)
C5': (11.253,-13.517,-7.911)
O4': (9.537,-14.203,-6.326)
C8: (10.100,-16.007,-4.278)
O2': (8.573,-11.506,-5.000)
C6: (9.236,-16.293,-0.882)
C5: (9.506,-16.037,-2.237)
C4: (8.980,-14.875,-2.772)
P: (12.947,-15.444,-7.376)
C4': (10.235,-13.070,-6.894)
C2': (9.575,-12.456,-4.725)
C2: (8.058,-14.302,-0.862)
N1: (8.496,-15.386,-0.207)
N3: (8.241,-13.954,-2.134)
N6: (9.662,-17.379,-0.235)
N7: (10.217,-16.744,-3.198)
N9: (9.359,-14.865,-4.091)
O5': (12.442,-13.941,-7.261)
O3': (11.175,-11.058,-5.976)
OP2: (11.785,-16.345,-7.174)
C3': (10.775,-12.381,-5.665)
C1': (9.010,-13.834,-5.064)
C5': (11.253,-13.517,-7.911)
O4': (9.537,-14.203,-6.326)
C8: (10.100,-16.007,-4.278)
O2': (8.573,-11.506,-5.000)
C6: (9.236,-16.293,-0.882)
C5: (9.506,-16.037,-2.237)
C4: (8.980,-14.875,-2.772)
P: (12.947,-15.444,-7.376)
C4': (10.235,-13.070,-6.894)
C2': (9.575,-12.456,-4.725)
C2: (8.058,-14.302,-0.862)
N1: (8.496,-15.386,-0.207)
N3: (8.241,-13.954,-2.134)
N6: (9.662,-17.379,-0.235)
N7: (10.217,-16.744,-3.198)
N9: (9.359,-14.865,-4.091)
O5': (12.442,-13.941,-7.261)
O3': (11.175,-11.058,-5.976)
Image (generated by PyMOL):