ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3B5A:B9:B22

Extra

PDB:
ATOM 1 O3' A A 8 44.661 18.937 49.326 1.00 71.10 O
ATOM 2 P G A 9 44.644 20.485 48.920 1.00 71.09 P
ATOM 3 OP1 G A 9 45.744 20.708 47.957 1.00 74.94 O
ATOM 4 OP2 G A 9 44.592 21.269 50.185 1.00 73.33 O
ATOM 5 O5' G A 9 43.291 20.656 48.109 1.00 68.03 O
ATOM 6 C5' G A 9 43.107 19.964 46.894 1.00 61.25 C
ATOM 7 C4' G A 9 41.649 19.896 46.541 1.00 64.39 C
ATOM 8 O4' G A 9 40.946 19.193 47.591 1.00 63.48 O
ATOM 9 C3' G A 9 40.932 21.225 46.466 1.00 64.66 C
ATOM 10 O3' G A 9 41.096 21.862 45.218 1.00 64.86 O
ATOM 11 C2' G A 9 39.492 20.812 46.685 1.00 62.76 C
ATOM 12 O2' G A 9 38.971 20.190 45.533 1.00 65.01 O
ATOM 13 C1' G A 9 39.660 19.755 47.764 1.00 62.31 C
ATOM 14 N9 G A 9 39.575 20.315 49.110 1.00 62.00 N
ATOM 15 C8 G A 9 40.610 20.591 49.969 1.00 62.31 C
ATOM 16 N7 G A 9 40.210 21.047 51.125 1.00 62.29 N
ATOM 17 C5 G A 9 38.825 21.085 51.018 1.00 59.57 C
ATOM 18 C6 G A 9 37.846 21.475 51.955 1.00 60.92 C
ATOM 19 O6 G A 9 38.016 21.883 53.116 1.00 60.22 O
ATOM 20 N1 G A 9 36.559 21.351 51.430 1.00 55.85 N
ATOM 21 C2 G A 9 36.261 20.906 50.167 1.00 57.40 C
ATOM 22 N2 G A 9 34.972 20.843 49.832 1.00 56.41 N
ATOM 23 N3 G A 9 37.165 20.544 49.290 1.00 58.00 N
ATOM 24 C4 G A 9 38.418 20.652 49.776 1.00 59.26 C
ATOM 25 P G A 10 40.990 23.458 45.137 1.00 71.14 P
ATOM 26 OP1 G A 10 41.462 23.912 43.812 1.00 72.49 O
ATOM 27 OP2 G A 10 41.651 23.945 46.370 1.00 66.90 O
ATOM 28 O5' G A 10 39.428 23.757 45.186 1.00 67.01 O
TER

ATOM 1 O3' A B 21 35.364 17.626 37.655 1.00 69.77 O
ATOM 2 P A B 22 36.378 16.569 38.325 1.00 74.25 P
ATOM 3 OP1 A B 22 37.438 16.257 37.324 1.00 77.16 O
ATOM 4 OP2 A B 22 35.598 15.461 38.952 1.00 66.52 O
ATOM 5 O5' A B 22 37.076 17.392 39.484 1.00 69.06 O
ATOM 6 C5' A B 22 38.080 18.355 39.204 1.00 67.03 C
ATOM 7 C4' A B 22 38.597 18.928 40.497 1.00 68.30 C
ATOM 8 O4' A B 22 37.487 19.535 41.210 1.00 67.26 O
ATOM 9 C3' A B 22 39.148 17.906 41.469 1.00 65.74 C
ATOM 10 O3' A B 22 40.499 17.588 41.184 1.00 68.82 O
ATOM 11 C2' A B 22 38.974 18.615 42.804 1.00 66.41 C
ATOM 12 O2' A B 22 39.972 19.586 43.042 1.00 70.91 O
ATOM 13 C1' A B 22 37.621 19.294 42.599 1.00 65.46 C
ATOM 14 N9 A B 22 36.510 18.430 43.014 1.00 64.48 N
ATOM 15 C8 A B 22 35.656 17.694 42.220 1.00 64.81 C
ATOM 16 N7 A B 22 34.752 17.013 42.893 1.00 62.28 N
ATOM 17 C5 A B 22 35.025 17.324 44.221 1.00 62.12 C
ATOM 18 C6 A B 22 34.414 16.935 45.443 1.00 61.49 C
ATOM 19 N6 A B 22 33.351 16.121 45.533 1.00 59.87 N
ATOM 20 N1 A B 22 34.944 17.428 46.585 1.00 60.78 N
ATOM 21 C2 A B 22 36.003 18.259 46.504 1.00 58.63 C
ATOM 22 N3 A B 22 36.652 18.700 45.430 1.00 60.19 N
ATOM 23 C4 A B 22 36.110 18.193 44.308 1.00 62.78 C
ATOM 24 P C B 23 41.051 16.123 41.527 1.00 72.02 P
ATOM 25 OP1 C B 23 42.520 16.126 41.301 1.00 69.52 O
ATOM 26 OP2 C B 23 40.179 15.142 40.815 1.00 65.93 O
ATOM 27 O5' C B 23 40.810 15.984 43.095 1.00 70.64 O
TER

Atoms:
OP1: (45.744,20.708,47.957)
OP2: (44.592,21.269,50.185)
C3': (40.932,21.225,46.466)
C1': (39.660,19.755,47.764)
C5': (43.107,19.964,46.894)
O6: (38.016,21.883,53.116)
O4': (40.946,19.193,47.591)
C8: (40.610,20.591,49.969)
C2: (36.261,20.906,50.167)
C6: (37.846,21.475,51.955)
C5: (38.825,21.085,51.018)
C4: (38.418,20.652,49.776)
P: (44.644,20.485,48.920)
C4': (41.649,19.896,46.541)
C2': (39.492,20.812,46.685)
O2': (38.971,20.190,45.533)
N1: (36.559,21.351,51.430)
N2: (34.972,20.843,49.832)
N3: (37.165,20.544,49.290)
N7: (40.210,21.047,51.125)
N9: (39.575,20.315,49.110)
O5': (43.291,20.656,48.109)
O3': (41.096,21.862,45.218)
OP1: (37.438,16.257,37.324)
OP2: (35.598,15.461,38.952)
C3': (39.148,17.906,41.469)
C1': (37.621,19.294,42.599)
C5': (38.080,18.355,39.204)
O4': (37.487,19.535,41.210)
C8: (35.656,17.694,42.220)
O2': (39.972,19.586,43.042)
C6: (34.414,16.935,45.443)
C5: (35.025,17.324,44.221)
C4: (36.110,18.193,44.308)
P: (36.378,16.569,38.325)
C4': (38.597,18.928,40.497)
C2': (38.974,18.615,42.804)
C2: (36.003,18.259,46.504)
N1: (34.944,17.428,46.585)
N3: (36.652,18.700,45.430)
N6: (33.351,16.121,45.533)
N7: (34.752,17.013,42.893)
N9: (36.510,18.430,43.014)
O5': (37.076,17.392,39.484)
O3': (40.499,17.588,41.184)
Image (generated by PyMOL):
PyMOL image
show in jmol