ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ8:02468:01953

Extra

PDB:
ATOM 1 O3' C A2467 101.664 118.803 96.963 1.00 38.26 O
ATOM 2 P G A2468 101.954 117.373 96.293 1.00 37.37 P
ATOM 3 OP1 G A2468 103.432 117.238 96.270 1.00 41.15 O
ATOM 4 OP2 G A2468 101.188 117.240 95.029 1.00 37.85 O
ATOM 5 O5' G A2468 101.341 116.338 97.336 1.00 38.39 O
ATOM 6 C5' G A2468 101.901 116.184 98.649 1.00 36.32 C
ATOM 7 C4' G A2468 101.028 115.268 99.474 1.00 37.91 C
ATOM 8 O4' G A2468 99.748 115.904 99.744 1.00 38.42 O
ATOM 9 C3' G A2468 100.653 113.972 98.782 1.00 37.97 C
ATOM 10 O3' G A2468 101.687 113.013 98.887 1.00 40.57 O
ATOM 11 C2' G A2468 99.379 113.579 99.509 1.00 37.35 C
ATOM 12 O2' G A2468 99.645 113.061 100.794 1.00 39.54 O
ATOM 13 C1' G A2468 98.702 114.943 99.655 1.00 37.04 C
ATOM 14 N9 G A2468 97.892 115.279 98.487 1.00 36.04 N
ATOM 15 C8 G A2468 98.297 116.005 97.393 1.00 34.41 C
ATOM 16 N7 G A2468 97.362 116.147 96.496 1.00 34.66 N
ATOM 17 C5 G A2468 96.272 115.473 97.025 1.00 33.97 C
ATOM 18 C6 G A2468 94.977 115.274 96.490 1.00 35.11 C
ATOM 19 O6 G A2468 94.521 115.674 95.402 1.00 32.95 O
ATOM 20 N1 G A2468 94.179 114.523 97.349 1.00 34.33 N
ATOM 21 C2 G A2468 94.584 114.023 98.567 1.00 36.74 C
ATOM 22 N2 G A2468 93.671 113.312 99.255 1.00 36.18 N
ATOM 23 N3 G A2468 95.796 114.202 99.075 1.00 36.24 N
ATOM 24 C4 G A2468 96.581 114.931 98.255 1.00 34.81 C
ATOM 25 P U A2469 101.907 111.963 97.700 1.00 41.53 P
ATOM 26 OP1 U A2469 103.076 111.135 98.075 1.00 43.04 O
ATOM 27 OP2 U A2469 101.904 112.687 96.397 1.00 41.13 O
ATOM 28 O5' U A2469 100.593 111.059 97.750 1.00 43.69 O
TER

ATOM 1 O3' C B1952 101.200 105.910 106.278 1.00 54.81 O
ATOM 2 P A B1953 101.609 105.691 104.741 1.00 55.07 P
ATOM 3 OP1 A B1953 100.369 105.532 103.930 1.00 55.59 O
ATOM 4 OP2 A B1953 102.644 104.619 104.733 1.00 55.02 O
ATOM 5 O5' A B1953 102.275 107.077 104.335 1.00 54.68 O
ATOM 6 C5' A B1953 102.979 107.230 103.093 1.00 51.95 C
ATOM 7 C4' A B1953 102.718 108.601 102.516 1.00 51.25 C
ATOM 8 O4' A B1953 101.372 108.663 101.968 1.00 50.50 O
ATOM 9 C3' A B1953 102.828 109.767 103.489 1.00 49.85 C
ATOM 10 O3' A B1953 103.263 110.892 102.751 1.00 50.78 O
ATOM 11 C2' A B1953 101.374 109.981 103.907 1.00 49.60 C
ATOM 12 O2' A B1953 101.112 111.298 104.361 1.00 49.01 O
ATOM 13 C1' A B1953 100.652 109.708 102.588 1.00 48.88 C
ATOM 14 N9 A B1953 99.258 109.282 102.707 1.00 48.02 N
ATOM 15 C8 A B1953 98.785 108.090 103.197 1.00 48.02 C
ATOM 16 N7 A B1953 97.480 107.979 103.146 1.00 48.38 N
ATOM 17 C5 A B1953 97.065 109.180 102.592 1.00 47.35 C
ATOM 18 C6 A B1953 95.795 109.679 102.276 1.00 48.65 C
ATOM 19 N6 A B1953 94.664 108.998 102.483 1.00 50.80 N
ATOM 20 N1 A B1953 95.721 110.914 101.731 1.00 47.80 N
ATOM 21 C2 A B1953 96.856 111.587 101.523 1.00 48.01 C
ATOM 22 N3 A B1953 98.110 111.223 101.780 1.00 47.81 N
ATOM 23 C4 A B1953 98.147 109.994 102.321 1.00 47.58 C
ATOM 24 P U B1954 104.667 111.591 103.094 1.00 52.28 P
ATOM 25 OP1 U B1954 105.751 110.873 102.371 1.00 47.85 O
ATOM 26 OP2 U B1954 104.785 111.813 104.561 1.00 51.22 O
ATOM 27 O5' U B1954 104.460 113.034 102.463 1.00 51.35 O
TER

Atoms:
OP1: (103.432,117.238,96.270)
OP2: (101.188,117.240,95.029)
C3': (100.653,113.972,98.782)
C1': (98.702,114.943,99.655)
C5': (101.901,116.184,98.649)
O6: (94.521,115.674,95.402)
O4': (99.748,115.904,99.744)
C8: (98.297,116.005,97.393)
C2: (94.584,114.023,98.567)
C6: (94.977,115.274,96.490)
C5: (96.272,115.473,97.025)
C4: (96.581,114.931,98.255)
P: (101.954,117.373,96.293)
C4': (101.028,115.268,99.474)
C2': (99.379,113.579,99.509)
O2': (99.645,113.061,100.794)
N1: (94.179,114.523,97.349)
N2: (93.671,113.312,99.255)
N3: (95.796,114.202,99.075)
N7: (97.362,116.147,96.496)
N9: (97.892,115.279,98.487)
O5': (101.341,116.338,97.336)
O3': (101.687,113.013,98.887)
OP1: (100.369,105.532,103.930)
OP2: (102.644,104.619,104.733)
C3': (102.828,109.767,103.489)
C1': (100.652,109.708,102.588)
C5': (102.979,107.230,103.093)
O4': (101.372,108.663,101.968)
C8: (98.785,108.090,103.197)
O2': (101.112,111.298,104.361)
C6: (95.795,109.679,102.276)
C5: (97.065,109.180,102.592)
C4: (98.147,109.994,102.321)
P: (101.609,105.691,104.741)
C4': (102.718,108.601,102.516)
C2': (101.374,109.981,103.907)
C2: (96.856,111.587,101.523)
N1: (95.721,110.914,101.731)
N3: (98.110,111.223,101.780)
N6: (94.664,108.998,102.483)
N7: (97.480,107.979,103.146)
N9: (99.258,109.282,102.707)
O5': (102.275,107.077,104.335)
O3': (103.263,110.892,102.751)
Image (generated by PyMOL):
PyMOL image
show in jmol