ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YHQ:01959:01956

Extra

PDB:
ATOM 1 O3' U A1958 107.417 120.483 88.941 1.00 33.13 O
ATOM 2 P G A1959 106.630 121.543 89.890 1.00 30.06 P
ATOM 3 OP1 G A1959 105.668 120.859 90.769 1.00 35.59 O
ATOM 4 OP2 G A1959 106.158 122.631 89.006 1.00 30.52 O
ATOM 5 O5' G A1959 107.703 122.139 90.905 1.00 35.87 O
ATOM 6 C5' G A1959 109.047 122.419 90.517 1.00 31.17 C
ATOM 7 C4' G A1959 110.003 121.688 91.427 1.00 31.15 C
ATOM 8 O4' G A1959 111.285 121.623 90.759 1.00 31.47 O
ATOM 9 C3' G A1959 110.318 122.279 92.801 1.00 31.28 C
ATOM 10 O3' G A1959 109.362 121.952 93.819 1.00 33.13 O
ATOM 11 C2' G A1959 111.666 121.638 93.095 1.00 31.39 C
ATOM 12 O2' G A1959 111.552 120.284 93.473 1.00 30.17 O
ATOM 13 C1' G A1959 112.322 121.677 91.716 1.00 30.98 C
ATOM 14 N9 G A1959 113.081 122.901 91.493 1.00 29.99 N
ATOM 15 C8 G A1959 112.741 123.968 90.697 1.00 29.71 C
ATOM 16 N7 G A1959 113.639 124.914 90.700 1.00 30.61 N
ATOM 17 C5 G A1959 114.628 124.439 91.552 1.00 31.38 C
ATOM 18 C6 G A1959 115.851 125.023 91.952 1.00 30.03 C
ATOM 19 O6 G A1959 116.329 126.104 91.612 1.00 34.34 O
ATOM 20 N1 G A1959 116.538 124.211 92.843 1.00 28.64 N
ATOM 21 C2 G A1959 116.106 122.990 93.294 1.00 27.54 C
ATOM 22 N2 G A1959 116.895 122.359 94.177 1.00 25.54 N
ATOM 23 N3 G A1959 114.976 122.428 92.915 1.00 28.85 N
ATOM 24 C4 G A1959 114.292 123.203 92.052 1.00 29.79 C
ATOM 25 P G A1960 109.399 122.722 95.247 1.00 33.37 P
ATOM 26 OP1 G A1960 108.230 122.267 96.044 1.00 34.25 O
ATOM 27 OP2 G A1960 109.591 124.175 95.014 1.00 31.11 O
ATOM 28 O5' G A1960 110.693 122.155 95.985 1.00 33.05 O
TER

ATOM 1 O3' G B1955 110.914 116.445 96.076 1.00 34.95 O
ATOM 2 P A B1956 111.107 115.241 95.022 1.00 35.87 P
ATOM 3 OP1 A B1956 110.550 115.695 93.723 1.00 36.88 O
ATOM 4 OP2 A B1956 110.604 113.990 95.631 1.00 34.68 O
ATOM 5 O5' A B1956 112.691 115.104 94.881 1.00 34.34 O
ATOM 6 C5' A B1956 113.413 115.766 93.819 1.00 35.51 C
ATOM 7 C4' A B1956 113.604 117.234 94.142 1.00 33.26 C
ATOM 8 O4' A B1956 114.107 117.373 95.495 1.00 33.97 O
ATOM 9 C3' A B1956 114.616 117.967 93.276 1.00 34.19 C
ATOM 10 O3' A B1956 114.036 118.431 92.050 1.00 35.59 O
ATOM 11 C2' A B1956 115.040 119.127 94.175 1.00 33.71 C
ATOM 12 O2' A B1956 114.148 120.219 94.142 1.00 34.02 O
ATOM 13 C1' A B1956 114.971 118.493 95.567 1.00 34.44 C
ATOM 14 N9 A B1956 116.256 118.066 96.122 1.00 36.32 N
ATOM 15 C8 A B1956 116.657 116.788 96.414 1.00 36.71 C
ATOM 16 N7 A B1956 117.858 116.714 96.926 1.00 38.37 N
ATOM 17 C5 A B1956 118.286 118.033 96.968 1.00 38.55 C
ATOM 18 C6 A B1956 119.485 118.624 97.404 1.00 38.10 C
ATOM 19 N6 A B1956 120.511 117.931 97.899 1.00 39.48 N
ATOM 20 N1 A B1956 119.594 119.964 97.311 1.00 37.41 N
ATOM 21 C2 A B1956 118.566 120.656 96.811 1.00 38.07 C
ATOM 22 N3 A B1956 117.391 120.217 96.367 1.00 37.82 N
ATOM 23 C4 A B1956 117.312 118.878 96.475 1.00 37.47 C
ATOM 24 P A B1957 114.612 117.912 90.640 1.00 37.97 P
ATOM 25 OP1 A B1957 113.792 116.740 90.244 1.00 40.63 O
ATOM 26 OP2 A B1957 116.079 117.766 90.754 1.00 40.46 O
ATOM 27 O5' A B1957 114.277 119.077 89.595 1.00 36.89 O
TER

Atoms:
OP1: (105.668,120.859,90.769)
OP2: (106.158,122.631,89.006)
C3': (110.318,122.279,92.801)
C1': (112.322,121.677,91.716)
C5': (109.047,122.419,90.517)
O6: (116.329,126.104,91.612)
O4': (111.285,121.623,90.759)
C8: (112.741,123.968,90.697)
C2: (116.106,122.990,93.294)
C6: (115.851,125.023,91.952)
C5: (114.628,124.439,91.552)
C4: (114.292,123.203,92.052)
P: (106.630,121.543,89.890)
C4': (110.003,121.688,91.427)
C2': (111.666,121.638,93.095)
O2': (111.552,120.284,93.473)
N1: (116.538,124.211,92.843)
N2: (116.895,122.359,94.177)
N3: (114.976,122.428,92.915)
N7: (113.639,124.914,90.700)
N9: (113.081,122.901,91.493)
O5': (107.703,122.139,90.905)
O3': (109.362,121.952,93.819)
OP1: (110.550,115.695,93.723)
OP2: (110.604,113.990,95.631)
C3': (114.616,117.967,93.276)
C1': (114.971,118.493,95.567)
C5': (113.413,115.766,93.819)
O4': (114.107,117.373,95.495)
C8: (116.657,116.788,96.414)
O2': (114.148,120.219,94.142)
C6: (119.485,118.624,97.404)
C5: (118.286,118.033,96.968)
C4: (117.312,118.878,96.475)
P: (111.107,115.241,95.022)
C4': (113.604,117.234,94.142)
C2': (115.040,119.127,94.175)
C2: (118.566,120.656,96.811)
N1: (119.594,119.964,97.311)
N3: (117.391,120.217,96.367)
N6: (120.511,117.931,97.899)
N7: (117.858,116.714,96.926)
N9: (116.256,118.066,96.122)
O5': (112.691,115.104,94.881)
O3': (114.036,118.431,92.050)
Image (generated by PyMOL):
PyMOL image
show in jmol